RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	MAK3	Q03503	176 aa		6.82	□□□□□ -1.32
TGA1	tA(UGC)A	RCF1	Q03713	159 aa		6.82	□□□□□ -1.32
TGA1	tA(UGC)A	YDR248C	Q03786	193 aa		6.82	□□□□□ -1.32
TGA1	tA(UGC)A	YDR114C	Q04597	100 aa		6.82	□□□□□ -1.32
TGA1	tA(UGC)A	CSI2	Q08054	341 aa		6.82	□□□□□ -1.32
TGA1	tA(UGC)A	YOR029W	Q12243	111 aa		6.82	□□□□□ -1.32
TGA1	tA(UGC)A	ORT1	Q12375	292 aa		6.82	□□□□□ -1.32
TGA1	tA(UGC)A	YEL009C-A	A0A023PZF2	135 aa		6.81	□□□□□ -1.32
TGA1	tA(UGC)A	SFK1	P35735	353 aa		6.81	□□□□□ -1.32
TGA1	tA(UGC)A	GPI18	P38211	433 aa		6.81	□□□□□ -1.32
TGA1	tA(UGC)A	SOL3	P38858	249 aa		6.81	□□□□□ -1.32
TGA1	tA(UGC)A	YER079W	P40052	210 aa	Known RBP	6.81	□□□□□ -1.32
TGA1	tA(UGC)A	POP6	P53218	158 aa		6.81	□□□□□ -1.32
TGA1	tA(UGC)A	SMM1	P53720	384 aa	Known RBP	6.81	□□□□□ -1.32
TGA1	tA(UGC)A	PRP3	Q03338	469 aa	Predicted RBP	6.81	□□□□□ -1.32
TGA1	tA(UGC)A	PIN3	Q06449	215 aa		6.81	□□□□□ -1.32
TGA1	tA(UGC)A	ASR1	Q06834	288 aa		6.81	□□□□□ -1.32
TGA1	tA(UGC)A	MPD1	Q12404	318 aa	Known RBP	6.81	□□□□□ -1.32
TGA1	tA(UGC)A	ERP4	Q12450	207 aa		6.81	□□□□□ -1.32
TGA1	tA(UGC)A	HUT1	Q12520	339 aa		6.81	□□□□□ -1.32
TGA1	tA(UGC)A	CCW14	O13547	238 aa		6.8	□□□□□ -1.32
TGA1	tA(UGC)A	CDC28	P00546	298 aa	Known RBP	6.8	□□□□□ -1.32
TGA1	tA(UGC)A	VMA3	P25515	160 aa		6.8	□□□□□ -1.32
TGA1	tA(UGC)A	ARO7	P32178	256 aa		6.8	□□□□□ -1.32
TGA1	tA(UGC)A	MSS4	P38994	779 aa		6.8	□□□□□ -1.32
TGA1	tA(UGC)A	DDI1	P40087	428 aa		6.8	□□□□□ -1.32
TGA1	tA(UGC)A	SLM1	P40485	686 aa		6.8	□□□□□ -1.32
TGA1	tA(UGC)A	AIR1	P40507	360 aa	Known RBP	6.8	□□□□□ -1.32
TGA1	tA(UGC)A	AVT4	P50944	713 aa		6.8	□□□□□ -1.32
TGA1	tA(UGC)A	IMO32	P53219	342 aa		6.8	□□□□□ -1.32
TGA1	tA(UGC)A	YNR064C	P53750	290 aa		6.8	□□□□□ -1.32
TGA1	tA(UGC)A	RRP17	Q04031	235 aa	Predicted RBP	6.8	□□□□□ -1.32
TGA1	tA(UGC)A	MRX10	Q05648	414 aa		6.8	□□□□□ -1.32
TGA1	tA(UGC)A	PEX30	Q06169	523 aa		6.8	□□□□□ -1.32
TGA1	tA(UGC)A	MRX9	Q07349	420 aa	Known RBP	6.8	□□□□□ -1.32
TGA1	tA(UGC)A	YLR099W-A	Q3E798	87 aa		6.8	□□□□□ -1.32
TGA1	tA(UGC)A	YBL113C	Q7M4S9	792 aa		6.8	□□□□□ -1.32
TGA1	tA(UGC)A	PEX4	P29340	183 aa		6.79	□□□□□ -1.32
TGA1	tA(UGC)A	SNC2	P33328	115 aa		6.79	□□□□□ -1.32
TGA1	tA(UGC)A	CCZ1	P38273	704 aa		6.79	□□□□□ -1.32
TGA1	tA(UGC)A	YHC3	P47040	408 aa		6.79	□□□□□ -1.32
TGA1	tA(UGC)A	EFM3	P47163	339 aa		6.79	□□□□□ -1.32
TGA1	tA(UGC)A	PRM15	Q03262	622 aa		6.79	□□□□□ -1.32
TGA1	tA(UGC)A	GRX3	Q03835	250 aa		6.79	□□□□□ -1.32
TGA1	tA(UGC)A	RRP15	Q06511	250 aa	Predicted RBP	6.79	□□□□□ -1.32
TGA1	tA(UGC)A	GRC3	Q07845	632 aa		6.79	□□□□□ -1.32
TGA1	tA(UGC)A	YMR105W-A	Q8TGS8	64 aa		6.79	□□□□□ -1.32
TGA1	tA(UGC)A	TDH2	P00358	332 aa	Known RBP	6.78	□□□□□ -1.32
TGA1	tA(UGC)A	CNE1	P27825	502 aa		6.78	□□□□□ -1.32
TGA1	tA(UGC)A	RCN1	P36054	211 aa		6.78	□□□□□ -1.32
TGA1	tA(UGC)A	LNP1	P38878	278 aa		6.78	□□□□□ -1.32
TGA1	tA(UGC)A	BNA6	P43619	295 aa		6.78	□□□□□ -1.32
TGA1	tA(UGC)A	SSN8	P47821	323 aa		6.78	□□□□□ -1.32
TGA1	tA(UGC)A	DOC1	P53068	250 aa		6.78	□□□□□ -1.32
TGA1	tA(UGC)A	SCW4	P53334	386 aa	Known RBP	6.78	□□□□□ -1.32
TGA1	tA(UGC)A	APJ1	P53940	528 aa		6.78	□□□□□ -1.32
TGA1	tA(UGC)A	UTP15	Q04305	513 aa	Known RBP	6.78	□□□□□ -1.32
TGA1	tA(UGC)A	YMR317W	Q04893	1140 aa		6.78	□□□□□ -1.32
TGA1	tA(UGC)A	MRPL35	Q06678	367 aa		6.78	□□□□□ -1.32
TGA1	tA(UGC)A	CDC31	P06704	161 aa	Known RBP	6.77	□□□□□ -1.33
TGA1	tA(UGC)A	ARO4	P32449	370 aa	Known RBP	6.77	□□□□□ -1.33
TGA1	tA(UGC)A	IES6	P32617	166 aa		6.77	□□□□□ -1.33
TGA1	tA(UGC)A	YBR137W	P38276	179 aa		6.77	□□□□□ -1.33
TGA1	tA(UGC)A	MID1	P41821	548 aa		6.77	□□□□□ -1.33
TGA1	tA(UGC)A	TMA20	P89886	181 aa	Predicted RBP	6.77	□□□□□ -1.33
TGA1	tA(UGC)A	YPL067C	Q02754	198 aa		6.77	□□□□□ -1.33
TGA1	tA(UGC)A	CAC2	Q04199	468 aa		6.77	□□□□□ -1.33
TGA1	tA(UGC)A	YMR254C	Q04838	102 aa		6.77	□□□□□ -1.33
TGA1	tA(UGC)A	FCY22	Q12119	530 aa		6.77	□□□□□ -1.33
TGA1	tA(UGC)A	TIR4	Q12218	487 aa	Predicted RBP	6.77	□□□□□ -1.33
TGA1	tA(UGC)A	FUR4	P05316	633 aa	Known RBP	6.76	□□□□□ -1.33
TGA1	tA(UGC)A	PET18	P25362	215 aa		6.76	□□□□□ -1.33
TGA1	tA(UGC)A	IMP1	P28627	190 aa		6.76	□□□□□ -1.33
TGA1	tA(UGC)A	ZUO1	P32527	433 aa	Known RBP	6.76	□□□□□ -1.33
TGA1	tA(UGC)A	YER188W	P40103	239 aa		6.76	□□□□□ -1.33
TGA1	tA(UGC)A	XPT1	P47165	209 aa		6.76	□□□□□ -1.33
TGA1	tA(UGC)A	YDR179W-A	Q03983	463 aa		6.76	□□□□□ -1.33
TGA1	tA(UGC)A	RIM9	Q04734	239 aa		6.76	□□□□□ -1.33
TGA1	tA(UGC)A	SPS4	P09937	338 aa		6.75	□□□□□ -1.33
TGA1	tA(UGC)A	GWT1	P47026	490 aa		6.75	□□□□□ -1.33
TGA1	tA(UGC)A	PRP11	Q07350	266 aa	Predicted RBP	6.75	□□□□□ -1.33
TGA1	tA(UGC)A	ATG41	Q12048	136 aa		6.75	□□□□□ -1.33
TGA1	tA(UGC)A	HIS3	P06633	220 aa		6.74	□□□□□ -1.33
TGA1	tA(UGC)A	FMP23	P38231	175 aa		6.74	□□□□□ -1.33
TGA1	tA(UGC)A	UMP1	P38293	148 aa		6.74	□□□□□ -1.33
TGA1	tA(UGC)A	OSH7	P38755	437 aa		6.74	□□□□□ -1.33
TGA1	tA(UGC)A	PIR5	P46999	287 aa		6.74	□□□□□ -1.33
TGA1	tA(UGC)A	MRX5	P47007	382 aa		6.74	□□□□□ -1.33
TGA1	tA(UGC)A	BUD25	P85052	153 aa		6.74	□□□□□ -1.33
TGA1	tA(UGC)A	MSA1	Q08471	629 aa		6.74	□□□□□ -1.33
TGA1	tA(UGC)A	YOR186W	Q08560	144 aa		6.74	□□□□□ -1.33
TGA1	tA(UGC)A	EAF3	Q12432	401 aa		6.74	□□□□□ -1.33
TGA1	tA(UGC)A	GCN4	P03069	281 aa		6.73	□□□□□ -1.33
TGA1	tA(UGC)A	MTC7	P32633	139 aa		6.73	□□□□□ -1.33
TGA1	tA(UGC)A	AGA2	P32781	87 aa		6.73	□□□□□ -1.33
TGA1	tA(UGC)A	SHE2	P36068	246 aa	Known RBP RIP-Chip data	6.73	□□□□□ -1.33	not detected
TGA1	tA(UGC)A	NAT2	P37293	288 aa		6.73	□□□□□ -1.33
TGA1	tA(UGC)A	GPX2	P38143	162 aa		6.73	□□□□□ -1.33
TGA1	tA(UGC)A	ALG14	P38242	237 aa		6.73	□□□□□ -1.33
TGA1	tA(UGC)A	SMB1	P40018	196 aa	Known RBP	6.73	□□□□□ -1.33

Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms