RNA–Protein interactions for RNA: snR53

snR53, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR53, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR53snR53 YMR134WP40207 237 aa-2.94□□□□□ -2.88
snR53snR53 CUE3P53137 624 aaKnown RBP-2.94□□□□□ -2.88
snR53snR53 NOP13P53883 403 aaKnown RBP RIP-Chip data-2.94□□□□□ -2.88not detected
snR53snR53 FIT2Q08906 153 aa-2.94□□□□□ -2.88
snR53snR53 YPR011CQ12251 326 aa-2.94□□□□□ -2.88
snR53snR53 ILV1P00927 576 aaKnown RBP-2.95□□□□□ -2.88
snR53snR53 ACB1P31787 87 aa-2.95□□□□□ -2.88
snR53snR53 YHL049CP38722 271 aa-2.95□□□□□ -2.88
snR53snR53 MOB1P40484 314 aa-2.95□□□□□ -2.88
snR53snR53 SPE3Q12074 293 aaKnown RBP-2.95□□□□□ -2.88
snR53snR53 EMP46Q12396 444 aa-2.95□□□□□ -2.88
snR53snR53 SIR2P06700 562 aa-2.96□□□□□ -2.88
snR53snR53 VPS24P36095 224 aaKnown RBP-2.96□□□□□ -2.88
snR53snR53 RXT2P38255 430 aa-2.96□□□□□ -2.88
snR53snR53 MEP1P40260 492 aa-2.96□□□□□ -2.88
snR53snR53 ZIM17P42844 174 aa-2.96□□□□□ -2.88
snR53snR53 SWC4P53201 476 aa-2.96□□□□□ -2.88
snR53snR53 SDC1Q03323 175 aa-2.96□□□□□ -2.88
snR53snR53 TMA23Q03525 211 aa-2.96□□□□□ -2.88
snR53snR53 TPO4Q12256 659 aa-2.96□□□□□ -2.88
snR53snR53 RGS2Q99188 309 aa-2.96□□□□□ -2.88
snR53snR53 PDR18P53756 1333 aa-2.96□□□□□ -2.88
snR53snR53 STE3P06783 470 aa-2.97□□□□□ -2.88
snR53snR53 YOL013W-AP0C272 63 aaPredicted RBP-2.97□□□□□ -2.88
snR53snR53 MRP7P12687 371 aa-2.97□□□□□ -2.88
snR53snR53 UBC8P28263 218 aa-2.97□□□□□ -2.88
snR53snR53 RPS0AP32905 252 aaKnown RBP-2.97□□□□□ -2.88
snR53snR53 LTV1P34078 463 aa-2.97□□□□□ -2.88
snR53snR53 BTT1P40314 149 aaPredicted RBP-2.97□□□□□ -2.88
snR53snR53 DCV1P43595 202 aa-2.97□□□□□ -2.88
snR53snR53 YGL185CP53100 379 aa-2.97□□□□□ -2.88
snR53snR53 VPS60Q03390 229 aa-2.97□□□□□ -2.88
snR53snR53 RVB1Q03940 463 aaKnown RBP-2.97□□□□□ -2.88
snR53snR53 YLR179CQ06252 201 aaKnown RBP-2.97□□□□□ -2.88
snR53snR53 LOA1Q06508 300 aa-2.97□□□□□ -2.88
snR53snR53 RRP42Q12277 265 aaPredicted RBP-2.97□□□□□ -2.88
snR53snR53 YPR064WQ12492 139 aa-2.97□□□□□ -2.88
snR53snR53 SPO13P23624 291 aa-2.98□□□□□ -2.89
snR53snR53 DAL80P26343 269 aa-2.98□□□□□ -2.89
snR53snR53 SUA5P32579 426 aa-2.98□□□□□ -2.89
snR53snR53 YMR209CQ03648 457 aa-2.98□□□□□ -2.89
snR53snR53 ATC1Q04005 294 aa-2.98□□□□□ -2.89
snR53snR53 YPR147CQ06522 304 aaKnown RBP-2.98□□□□□ -2.89
snR53snR53 YLL053CP0CD98 152 aa-2.99□□□□□ -2.89
snR53snR53 YCR001WP25347 104 aa-2.99□□□□□ -2.89
snR53snR53 HMX1P32339 317 aa-2.99□□□□□ -2.89
snR53snR53 YNR077CP53758 84 aa-2.99□□□□□ -2.89
snR53snR53 AI5_BETAQ9ZZX0 354 aa-2.99□□□□□ -2.89
snR53snR53 EHD3P28817 500 aa-3□□□□□ -2.89
snR53snR53 VMA5P31412 392 aaKnown RBP-3□□□□□ -2.89
snR53snR53 MSA2P36157 363 aa-3□□□□□ -2.89
snR53snR53 YMR141CP40211 102 aa-3□□□□□ -2.89
snR53snR53 YFR032C-BQ8TGU2 87 aa-3□□□□□ -2.89
snR53snR53 PET494P07390 489 aaPredicted RBP-3.01□□□□□ -2.89
snR53snR53 ABP140Q08641 628 aaKnown RBP-3.01□□□□□ -2.89
snR53snR53 FAS2P19097 1887 aaKnown RBP-3.01□□□□□ -2.89
snR53snR53 RPL4AP10664 362 aaKnown RBP-3.02□□□□□ -2.89
snR53snR53 THR4P16120 514 aaKnown RBP-3.02□□□□□ -2.89
snR53snR53 TRX2P22803 104 aaKnown RBP-3.02□□□□□ -2.89
snR53snR53 YHR122WP38829 231 aa-3.02□□□□□ -2.89
snR53snR53 RPL4BP49626 362 aaKnown RBP-3.02□□□□□ -2.89
snR53snR53 SLX9P53251 210 aaPredicted RBP-3.02□□□□□ -2.89
snR53snR53 MYO1P08964 1928 aa-3.03□□□□□ -2.89
snR53snR53 FZO1P38297 855 aa-3.03□□□□□ -2.89
snR53snR53 YBR209WP38311 105 aa-3.03□□□□□ -2.89
snR53snR53 SPG3Q04398 127 aaPredicted RBP-3.03□□□□□ -2.89
snR53snR53 ATG39Q06159 398 aa-3.03□□□□□ -2.89
snR53snR53 RPL31AP0C2H8 113 aaKnown RBP-3.04□□□□□ -2.9
snR53snR53 QRI5P32344 111 aa-3.04□□□□□ -2.9
snR53snR53 SPT4P32914 102 aaPredicted RBP-3.04□□□□□ -2.9
snR53snR53 JEN1P36035 616 aa-3.04□□□□□ -2.9
snR53snR53 YBR242WP38331 238 aa-3.04□□□□□ -2.9
snR53snR53 PRM9P39551 298 aa-3.04□□□□□ -2.9
snR53snR53 LSM5P40089 93 aaKnown RBP-3.04□□□□□ -2.9
snR53snR53 TAF9Q05027 157 aa-3.04□□□□□ -2.9
snR53snR53 UPS1Q05776 175 aa-3.04□□□□□ -2.9
snR53snR53 IZH4Q99393 312 aa-3.04□□□□□ -2.9
snR53snR53 YLR462WO13556 202 aa-3.05□□□□□ -2.9
snR53snR53 MDM35O60200 86 aa-3.05□□□□□ -2.9
snR53snR53 NFU1P32860 256 aa-3.05□□□□□ -2.9
snR53snR53 YSW1P38280 609 aa-3.05□□□□□ -2.9
snR53snR53 YEL075CP39972 122 aa-3.05□□□□□ -2.9
snR53snR53 YJR015WP47090 510 aa-3.05□□□□□ -2.9
snR53snR53 SEN15Q04675 128 aa-3.05□□□□□ -2.9
snR53snR53 FYV12Q08559 129 aa-3.05□□□□□ -2.9
snR53snR53 UBA1P22515 1024 aaKnown RBP-3.06□□□□□ -2.9
snR53snR53 YET1P35723 206 aa-3.06□□□□□ -2.9
snR53snR53 FIS1P40515 155 aa-3.06□□□□□ -2.9
snR53snR53 BNA7Q04066 261 aa-3.06□□□□□ -2.9
snR53snR53 YCT1Q12235 531 aa-3.06□□□□□ -2.9
snR53snR53 MED1Q12321 566 aa-3.06□□□□□ -2.9
snR53snR53 GPM3Q12326 303 aa-3.06□□□□□ -2.9
snR53snR53 YBL008W-AQ3E821 79 aa-3.06□□□□□ -2.9
snR53snR53 GSC2P40989 1895 aa-3.07□□□□□ -2.9
snR53snR53 DBF2P22204 572 aa-3.07□□□□□ -2.9
snR53snR53 CLG1P35190 452 aa-3.07□□□□□ -2.9
snR53snR53 VPS21P36017 210 aaKnown RBP-3.07□□□□□ -2.9
snR53snR53 DOC1P53068 250 aa-3.07□□□□□ -2.9
snR53snR53 FIT1Q04433 528 aa-3.07□□□□□ -2.9
snR53snR53 BNI1P41832 1953 aa-3.07□□□□□ -2.9
Retrieved 100 of 5,963 RNA–protein pairs in 53.6 ms