RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 SLD7Q08457 257 aa-3.24□□□□□ -2.93
snR40snR40 BRR2P32639 2163 aaKnown RBP-3.25□□□□□ -2.93
snR40snR40 RPL4AP10664 362 aaKnown RBP-3.25□□□□□ -2.93
snR40snR40 GRR1P24814 1151 aa-3.25□□□□□ -2.93
snR40snR40 PET18P25362 215 aa-3.25□□□□□ -2.93
snR40snR40 EHD3P28817 500 aa-3.25□□□□□ -2.93
snR40snR40 DDI1P40087 428 aa-3.25□□□□□ -2.93
snR40snR40 POG1P40473 351 aa-3.25□□□□□ -2.93
snR40snR40 RPL4BP49626 362 aaKnown RBP-3.25□□□□□ -2.93
snR40snR40 FMP41P53889 259 aaKnown RBP-3.25□□□□□ -2.93
snR40snR40 YDC1Q02896 317 aa-3.25□□□□□ -2.93
snR40snR40 YMR226CQ05016 267 aaKnown RBP-3.25□□□□□ -2.93
snR40snR40 YPR1Q12458 312 aa-3.25□□□□□ -2.93
snR40snR40 IGO2Q9P305 131 aa-3.25□□□□□ -2.93
snR40snR40 STE3P06783 470 aa-3.26□□□□□ -2.93
snR40snR40 DCC1P25559 380 aa-3.26□□□□□ -2.93
snR40snR40 MEI5P32489 222 aa-3.26□□□□□ -2.93
snR40snR40 MSN4P33749 630 aa-3.26□□□□□ -2.93
snR40snR40 YBR209WP38311 105 aa-3.26□□□□□ -2.93
snR40snR40 DOG2P38773 246 aa-3.26□□□□□ -2.93
snR40snR40 ARX1Q03862 593 aaKnown RBP-3.26□□□□□ -2.93
snR40snR40 KEI1Q06346 221 aa-3.26□□□□□ -2.93
snR40snR40 DBR1P24309 405 aaKnown RBP-3.27□□□□□ -2.93
snR40snR40 VPS21P36017 210 aaKnown RBP-3.27□□□□□ -2.93
snR40snR40 KAP114P53067 1004 aa-3.27□□□□□ -2.93
snR40snR40 YNR077CP53758 84 aa-3.27□□□□□ -2.93
snR40snR40 MGR2Q02889 113 aa-3.27□□□□□ -2.93
snR40snR40 MET31Q03081 177 aa-3.27□□□□□ -2.93
snR40snR40 YRA1Q12159 226 aaKnown RBP-3.27□□□□□ -2.93
snR40snR40 EMP46Q12396 444 aa-3.27□□□□□ -2.93
snR40snR40 AEP1P32493 518 aa-3.28□□□□□ -2.93
snR40snR40 IML3P38265 245 aa-3.28□□□□□ -2.93
snR40snR40 FZO1P38297 855 aa-3.28□□□□□ -2.93
snR40snR40 YHR140WP38842 239 aa-3.28□□□□□ -2.93
snR40snR40 FET3P38993 636 aa-3.28□□□□□ -2.93
snR40snR40 SER3P40054 469 aa-3.28□□□□□ -2.93
snR40snR40 RVB1Q03940 463 aaKnown RBP-3.28□□□□□ -2.93
snR40snR40 YLR456WQ06199 204 aa-3.28□□□□□ -2.93
snR40snR40 SEC11P15367 167 aa-3.29□□□□□ -2.94
snR40snR40 SEC22P22214 214 aa-3.29□□□□□ -2.94
snR40snR40 CWP1P28319 239 aa-3.29□□□□□ -2.94
snR40snR40 IMP3P32899 183 aaPredicted RBP-3.29□□□□□ -2.94
snR40snR40 VID27P40157 782 aa-3.29□□□□□ -2.94
snR40snR40 GLR1P41921 483 aaKnown RBP-3.29□□□□□ -2.94
snR40snR40 YFL040WP43562 540 aa-3.29□□□□□ -2.94
snR40snR40 ALG13P53178 202 aa-3.29□□□□□ -2.94
snR40snR40 PXR1P53335 271 aaPredicted RBP-3.29□□□□□ -2.94
snR40snR40 YMR321CQ04898 105 aa-3.29□□□□□ -2.94
snR40snR40 YLR287CQ05881 355 aa-3.29□□□□□ -2.94
snR40snR40 RPB7P34087 171 aa-3.3□□□□□ -2.94
snR40snR40 KAP104P38217 918 aaKnown RBP-3.3□□□□□ -2.94
snR40snR40 SLM4P38247 162 aa-3.3□□□□□ -2.94
snR40snR40 YHR035WP38769 630 aa-3.3□□□□□ -2.94
snR40snR40 MLH1P38920 769 aa-3.3□□□□□ -2.94
snR40snR40 OTU1P43558 301 aa-3.3□□□□□ -2.94
snR40snR40 DOC1P53068 250 aa-3.3□□□□□ -2.94
snR40snR40 PET191Q02772 108 aa-3.3□□□□□ -2.94
snR40snR40 RPS22AP0C0W1 130 aaKnown RBP-3.31□□□□□ -2.94
snR40snR40 CKI1P20485 582 aa-3.31□□□□□ -2.94
snR40snR40 DBF2P22204 572 aa-3.31□□□□□ -2.94
snR40snR40 CIN8P27895 1000 aa-3.31□□□□□ -2.94
snR40snR40 VMA22P38784 181 aa-3.31□□□□□ -2.94
snR40snR40 YGL185CP53100 379 aa-3.31□□□□□ -2.94
snR40snR40 NDL1Q06568 189 aa-3.31□□□□□ -2.94
snR40snR40 RPS22BQ3E7Y3 130 aaKnown RBP-3.31□□□□□ -2.94
snR40snR40 ISN1Q99312 450 aa-3.31□□□□□ -2.94
snR40snR40 RIF1P29539 1916 aa-3.32□□□□□ -2.94
snR40snR40 SAS3P34218 831 aa-3.32□□□□□ -2.94
snR40snR40 MCH2P36032 473 aa-3.32□□□□□ -2.94
snR40snR40 SWD2P36104 329 aaPredicted RBP-3.32□□□□□ -2.94
snR40snR40 YHL018WP38744 120 aaPredicted RBP-3.32□□□□□ -2.94
snR40snR40 VPS71Q03433 280 aa-3.32□□□□□ -2.94
snR40snR40 UBA1P22515 1024 aaKnown RBP-3.33□□□□□ -2.94
snR40snR40 YET1P35723 206 aa-3.33□□□□□ -2.94
snR40snR40 LAS1P36146 502 aaPredicted RBP-3.33□□□□□ -2.94
snR40snR40 TCB2P48231 1178 aa-3.33□□□□□ -2.94
snR40snR40 UPS3Q04006 179 aa-3.33□□□□□ -2.94
snR40snR40 SNX41Q04053 625 aa-3.33□□□□□ -2.94
snR40snR40 SPG3Q04398 127 aaPredicted RBP-3.33□□□□□ -2.94
snR40snR40 SEC10Q06245 871 aa-3.33□□□□□ -2.94
snR40snR40 IMH1Q06704 911 aaKnown RBP-3.33□□□□□ -2.94
snR40snR40 PER33Q12144 273 aa-3.33□□□□□ -2.94
snR40snR40 AIM45Q12480 344 aaKnown RBP-3.33□□□□□ -2.94
snR40snR40 YOL159C-AQ3E769 90 aa-3.33□□□□□ -2.94
snR40snR40 YOL164W-AQ3E7A5 60 aa-3.33□□□□□ -2.94
snR40snR40 TAR1Q8TGM6 124 aa-3.33□□□□□ -2.94
snR40snR40 DBP3P20447 523 aaKnown RBP-3.34□□□□□ -2.94
snR40snR40 TVP23P38962 199 aa-3.34□□□□□ -2.94
snR40snR40 YIL089WP40500 205 aa-3.34□□□□□ -2.94
snR40snR40 YML6P51998 286 aa-3.34□□□□□ -2.94
snR40snR40 SDC1Q03323 175 aa-3.34□□□□□ -2.94
snR40snR40 YML018CQ03730 393 aa-3.34□□□□□ -2.94
snR40snR40 FMN1Q03778 218 aa-3.34□□□□□ -2.94
snR40snR40 UTP23Q12339 254 aaKnown RBP-3.34□□□□□ -2.94
snR40snR40 AI5_BETAQ9ZZX0 354 aa-3.34□□□□□ -2.94
snR40snR40 OCH1P31755 480 aa-3.35□□□□□ -2.95
snR40snR40 YKR070WP36151 352 aaKnown RBP-3.35□□□□□ -2.95
snR40snR40 MAK5P38112 773 aaPredicted RBP-3.35□□□□□ -2.95
snR40snR40 PEX32P38292 413 aa-3.35□□□□□ -2.95
snR40snR40 NOP16P40007 231 aaKnown RBP-3.35□□□□□ -2.95
Retrieved 100 of 5,963 RNA–protein pairs in 102.8 ms