RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B VPS9P54787 451 aa-0.61□□□□□ -2.51
snR39BsnR39B SPC19Q03954 165 aa-0.61□□□□□ -2.51
snR39BsnR39B YMR111CQ04461 462 aaPredicted RBP-0.61□□□□□ -2.51
snR39BsnR39B ANT1Q06497 328 aa-0.61□□□□□ -2.51
snR39BsnR39B SAM4Q08985 325 aaKnown RBP-0.61□□□□□ -2.51
snR39BsnR39B MSW1P04803 379 aa-0.62□□□□□ -2.51
snR39BsnR39B YKL063CP35725 167 aa-0.62□□□□□ -2.51
snR39BsnR39B LIN1P38852 340 aaPredicted RBP-0.62□□□□□ -2.51
snR39BsnR39B GDI1P39958 451 aaKnown RBP-0.62□□□□□ -2.51
snR39BsnR39B YEA4P40004 342 aa-0.62□□□□□ -2.51
snR39BsnR39B YNL050CP53952 270 aa-0.62□□□□□ -2.51
snR39BsnR39B VBA1Q04301 562 aa-0.62□□□□□ -2.51
snR39BsnR39B HEM25Q07534 307 aa-0.62□□□□□ -2.51
snR39BsnR39B MSH5Q12175 901 aa-0.62□□□□□ -2.51
snR39BsnR39B ATP6P00854 259 aa-0.63□□□□□ -2.51
snR39BsnR39B RPP0P05317 312 aaKnown RBP-0.63□□□□□ -2.51
snR39BsnR39B RPL4AP10664 362 aaKnown RBP-0.63□□□□□ -2.51
snR39BsnR39B VMA8P32610 256 aaKnown RBP-0.63□□□□□ -2.51
snR39BsnR39B VPS21P36017 210 aaKnown RBP-0.63□□□□□ -2.51
snR39BsnR39B MSA2P36157 363 aa-0.63□□□□□ -2.51
snR39BsnR39B LRP1P38801 184 aaKnown RBP-0.63□□□□□ -2.51
snR39BsnR39B GAA1P39012 614 aa-0.63□□□□□ -2.51
snR39BsnR39B TIR3P40552 269 aa-0.63□□□□□ -2.51
snR39BsnR39B YAE1P47118 141 aaPredicted RBP-0.63□□□□□ -2.51
snR39BsnR39B RPL4BP49626 362 aaKnown RBP-0.63□□□□□ -2.51
snR39BsnR39B NBP35P52920 328 aa-0.63□□□□□ -2.51
snR39BsnR39B SWS2P53937 143 aa-0.63□□□□□ -2.51
snR39BsnR39B YPL077CQ02831 240 aa-0.63□□□□□ -2.51
snR39BsnR39B YLR179CQ06252 201 aaKnown RBP-0.63□□□□□ -2.51
snR39BsnR39B RRS1Q08746 203 aaKnown RBP-0.63□□□□□ -2.51
snR39BsnR39B PRM3Q08931 133 aa-0.63□□□□□ -2.51
snR39BsnR39B SKS1Q12505 502 aa-0.63□□□□□ -2.51
snR39BsnR39B NBL1Q3E7Y6 73 aa-0.63□□□□□ -2.51
snR39BsnR39B RNR2P09938 399 aaKnown RBP-0.64□□□□□ -2.51
snR39BsnR39B PEX3P28795 441 aa-0.64□□□□□ -2.51
snR39BsnR39B SWD2P36104 329 aaPredicted RBP-0.64□□□□□ -2.51
snR39BsnR39B DAD2P36162 133 aa-0.64□□□□□ -2.51
snR39BsnR39B VPS45P38932 577 aa-0.64□□□□□ -2.51
snR39BsnR39B SEC28P40509 296 aaKnown RBP-0.64□□□□□ -2.51
snR39BsnR39B RPL33BP41056 107 aaKnown RBP-0.64□□□□□ -2.51
snR39BsnR39B CUE3P53137 624 aaKnown RBP-0.64□□□□□ -2.51
snR39BsnR39B SAY1P53324 424 aa-0.64□□□□□ -2.51
snR39BsnR39B CUS2P53830 285 aaPredicted RBP-0.64□□□□□ -2.51
snR39BsnR39B RCE1Q03530 315 aa-0.64□□□□□ -2.51
snR39BsnR39B DBP9Q06218 594 aaKnown RBP-0.64□□□□□ -2.51
snR39BsnR39B SEC10Q06245 871 aa-0.64□□□□□ -2.51
snR39BsnR39B PAA1Q12447 191 aaKnown RBP-0.64□□□□□ -2.51
snR39BsnR39B YOS9Q99220 542 aa-0.64□□□□□ -2.51
snR39BsnR39B MET5P47169 1442 aa-0.64□□□□□ -2.51
snR39BsnR39B YLR462WO13556 202 aa-0.65□□□□□ -2.51
snR39BsnR39B RPL27BP0C2H7 136 aaKnown RBP-0.65□□□□□ -2.51
snR39BsnR39B GAL3P13045 520 aa-0.65□□□□□ -2.51
snR39BsnR39B MEI4P29467 408 aa-0.65□□□□□ -2.51
snR39BsnR39B PRX1P34227 261 aaKnown RBP-0.65□□□□□ -2.51
snR39BsnR39B SWC5P38326 303 aa-0.65□□□□□ -2.51
snR39BsnR39B SIP3P38717 1229 aa-0.65□□□□□ -2.51
snR39BsnR39B YHL042WP38729 150 aa-0.65□□□□□ -2.51
snR39BsnR39B RRF1P38771 230 aa-0.65□□□□□ -2.51
snR39BsnR39B APE4P38821 490 aa-0.65□□□□□ -2.51
snR39BsnR39B YEL075CP39972 122 aa-0.65□□□□□ -2.51
snR39BsnR39B PEX17P40155 199 aa-0.65□□□□□ -2.51
snR39BsnR39B PGD1P40356 397 aa-0.65□□□□□ -2.51
snR39BsnR39B YRB2P40517 327 aa-0.65□□□□□ -2.51
snR39BsnR39B GTO1P48239 356 aa-0.65□□□□□ -2.51
snR39BsnR39B YNL247WP53852 767 aaKnown RBP-0.65□□□□□ -2.51
snR39BsnR39B CDC14Q00684 551 aa-0.65□□□□□ -2.51
snR39BsnR39B SXM1Q04175 944 aaKnown RBP-0.65□□□□□ -2.51
snR39BsnR39B ASR1Q06834 288 aa-0.65□□□□□ -2.51
snR39BsnR39B YER189WP40104 122 aa-0.66□□□□□ -2.52
snR39BsnR39B YNL217WP40152 326 aa-0.66□□□□□ -2.52
snR39BsnR39B MEP1P40260 492 aa-0.66□□□□□ -2.52
snR39BsnR39B FLX1P40464 311 aa-0.66□□□□□ -2.52
snR39BsnR39B ARO8P53090 500 aaKnown RBP-0.66□□□□□ -2.52
snR39BsnR39B POP3P53833 195 aaPredicted RBP-0.66□□□□□ -2.52
snR39BsnR39B TPO4Q12256 659 aa-0.66□□□□□ -2.52
snR39BsnR39B SWI1P09547 1314 aa-0.66□□□□□ -2.52
snR39BsnR39B SSA3P09435 649 aaKnown RBP-0.67□□□□□ -2.52
snR39BsnR39B TAL1P15019 335 aaKnown RBP-0.67□□□□□ -2.52
snR39BsnR39B TFC1P32367 649 aa-0.67□□□□□ -2.52
snR39BsnR39B HEK2P38199 381 aaKnown RBP RIP-Chip data-0.67□□□□□ -2.52not detected
snR39BsnR39B YIA6P40556 373 aa-0.67□□□□□ -2.52
snR39BsnR39B COX16P47081 118 aa-0.67□□□□□ -2.52
snR39BsnR39B AIF1P52923 378 aa-0.67□□□□□ -2.52
snR39BsnR39B YGL159WP53110 370 aa-0.67□□□□□ -2.52
snR39BsnR39B POM33Q12164 279 aa-0.67□□□□□ -2.52
snR39BsnR39B YBL008W-AQ3E821 79 aa-0.67□□□□□ -2.52
snR39BsnR39B PDR18P53756 1333 aa-0.67□□□□□ -2.52
snR39BsnR39B SNA3P14359 133 aa-0.68□□□□□ -2.52
snR39BsnR39B ERG24P32462 438 aaKnown RBP-0.68□□□□□ -2.52
snR39BsnR39B CDC40P40968 455 aaPredicted RBP-0.68□□□□□ -2.52
snR39BsnR39B GPI8P49018 411 aa-0.68□□□□□ -2.52
snR39BsnR39B GTR2P53290 341 aa-0.68□□□□□ -2.52
snR39BsnR39B CWC27Q02770 301 aa-0.68□□□□□ -2.52
snR39BsnR39B SPG3Q04398 127 aaPredicted RBP-0.68□□□□□ -2.52
snR39BsnR39B FAR8Q05040 523 aa-0.68□□□□□ -2.52
snR39BsnR39B SFH1Q06168 426 aa-0.68□□□□□ -2.52
snR39BsnR39B PML1Q07930 204 aaPredicted RBP-0.68□□□□□ -2.52
snR39BsnR39B FRE6Q12473 712 aa-0.68□□□□□ -2.52
snR39BsnR39B RPL5P26321 297 aaKnown RBP-0.69□□□□□ -2.52
snR39BsnR39B POT1P27796 417 aaKnown RBP RIP-Chip data-0.69□□□□□ -2.52not detected
Retrieved 100 of 5,963 RNA–protein pairs in 110.7 ms