RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeastyeast

Gene RPA43, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA43YOR340C RIB1P38066 345 aa2.93□□□□□ -1.94
RPA43YOR340C PDX3P38075 228 aaKnown RBP2.93□□□□□ -1.94
RPA43YOR340C GRE3P38715 327 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
RPA43YOR340C ECM34P38728 170 aa2.93□□□□□ -1.94
RPA43YOR340C SSO2P39926 295 aa2.93□□□□□ -1.94
RPA43YOR340C AST2P39945 430 aaKnown RBP2.93□□□□□ -1.94
RPA43YOR340C PCL7P40186 285 aa2.93□□□□□ -1.94
RPA43YOR340C MPM1P40364 252 aa2.93□□□□□ -1.94
RPA43YOR340C LCB3P47013 409 aa2.93□□□□□ -1.94
RPA43YOR340C YHC3P47040 408 aa2.93□□□□□ -1.94
RPA43YOR340C PGU1P47180 361 aa2.93□□□□□ -1.94
RPA43YOR340C GET1P53192 235 aa2.93□□□□□ -1.94
RPA43YOR340C BOR1P53838 576 aa2.93□□□□□ -1.94
RPA43YOR340C SWP1Q02795 286 aa2.93□□□□□ -1.94
RPA43YOR340C NCE101Q02820 53 aa2.93□□□□□ -1.94
RPA43YOR340C YMR102CQ03177 834 aa2.93□□□□□ -1.94
RPA43YOR340C CGI121Q03705 181 aaKnown RBP2.93□□□□□ -1.94
RPA43YOR340C SPC24Q04477 213 aa2.93□□□□□ -1.94
RPA43YOR340C BCP1Q06338 283 aa2.93□□□□□ -1.94
RPA43YOR340C GPI11Q06636 219 aa2.93□□□□□ -1.94
RPA43YOR340C GAT3Q07928 141 aa2.93□□□□□ -1.94
RPA43YOR340C RRG7Q08774 242 aaPredicted RBP2.93□□□□□ -1.94
RPA43YOR340C YOR342CQ12182 319 aa2.93□□□□□ -1.94
RPA43YOR340C EAF3Q12432 401 aa2.93□□□□□ -1.94
RPA43YOR340C PSF1Q12488 208 aa2.93□□□□□ -1.94
RPA43YOR340C TIM9O74700 87 aa2.92□□□□□ -1.94
RPA43YOR340C HHF1P02309 103 aaKnown RBP2.92□□□□□ -1.94
RPA43YOR340C RAD7P06779 565 aa2.92□□□□□ -1.94
RPA43YOR340C YLL053CP0CD98 152 aa2.92□□□□□ -1.94
RPA43YOR340C KSS1P14681 368 aa2.92□□□□□ -1.94
RPA43YOR340C POP5P28005 173 aa2.92□□□□□ -1.94
RPA43YOR340C SSE1P32589 693 aaKnown RBP2.92□□□□□ -1.94
RPA43YOR340C MNS1P32906 549 aa2.92□□□□□ -1.94
RPA43YOR340C YBL059WP34224 193 aa2.92□□□□□ -1.94
RPA43YOR340C YOR062CP36025 268 aa2.92□□□□□ -1.94
RPA43YOR340C AVT5P38176 459 aa2.92□□□□□ -1.94
RPA43YOR340C YHK8P38776 514 aa2.92□□□□□ -1.94
RPA43YOR340C PTH1P38876 190 aaKnown RBP2.92□□□□□ -1.94
RPA43YOR340C AIM20P40451 204 aa2.92□□□□□ -1.94
RPA43YOR340C ECO1P43605 281 aa2.92□□□□□ -1.94
RPA43YOR340C APS3P47064 194 aa2.92□□□□□ -1.94
RPA43YOR340C EMC2P47133 292 aaKnown RBP2.92□□□□□ -1.94
RPA43YOR340C RPS12P48589 143 aaKnown RBP2.92□□□□□ -1.94
RPA43YOR340C CWC25P53854 179 aaKnown RBP2.92□□□□□ -1.94
RPA43YOR340C YLR460CP54007 376 aa2.92□□□□□ -1.94
RPA43YOR340C SSQ1Q05931 657 aaPredicted RBP2.92□□□□□ -1.94
RPA43YOR340C SPO77Q06134 477 aa2.92□□□□□ -1.94
RPA43YOR340C RSA1Q08932 381 aa2.92□□□□□ -1.94
RPA43YOR340C YDL211CQ12121 372 aa2.92□□□□□ -1.94
RPA43YOR340C FLO9P39712 1322 aa2.92□□□□□ -1.94
RPA43YOR340C PIS1P06197 220 aaKnown RBP2.91□□□□□ -1.94
RPA43YOR340C RPS8AP0CX39 200 aaKnown RBP2.91□□□□□ -1.94
RPA43YOR340C RPS8BP0CX40 200 aaKnown RBP2.91□□□□□ -1.94
RPA43YOR340C NAM2P11325 894 aa2.91□□□□□ -1.94
RPA43YOR340C ERD1P16151 362 aa2.91□□□□□ -1.94
RPA43YOR340C FAR1P21268 830 aa2.91□□□□□ -1.94
RPA43YOR340C PET18P25362 215 aa2.91□□□□□ -1.94
RPA43YOR340C IDH1P28834 360 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94not detected
RPA43YOR340C ATP7P30902 174 aa2.91□□□□□ -1.94
RPA43YOR340C NTG1P31378 399 aa2.91□□□□□ -1.94
RPA43YOR340C TFC1P32367 649 aa2.91□□□□□ -1.94
RPA43YOR340C ZUO1P32527 433 aaKnown RBP2.91□□□□□ -1.94
RPA43YOR340C MRPS5P33759 307 aa2.91□□□□□ -1.94
RPA43YOR340C NSG1P38837 291 aa2.91□□□□□ -1.94
RPA43YOR340C COS6P53344 381 aa2.91□□□□□ -1.94
RPA43YOR340C TPS1Q00764 495 aaKnown RBP2.91□□□□□ -1.94
RPA43YOR340C TDA1Q03533 586 aa2.91□□□□□ -1.94
RPA43YOR340C MIX14Q04341 121 aa2.91□□□□□ -1.94
RPA43YOR340C SPC2Q04969 178 aa2.91□□□□□ -1.94
RPA43YOR340C RNH202Q05635 350 aa2.91□□□□□ -1.94
RPA43YOR340C MSC3Q05812 728 aa2.91□□□□□ -1.94
RPA43YOR340C ARV1Q06541 321 aa2.91□□□□□ -1.94
RPA43YOR340C YPL225WQ08971 146 aaKnown RBP2.91□□□□□ -1.94
RPA43YOR340C YRA1Q12159 226 aaKnown RBP2.91□□□□□ -1.94
RPA43YOR340C YGK3Q12222 375 aaPredicted RBP2.91□□□□□ -1.94
RPA43YOR340C YDL199CQ12407 687 aa2.91□□□□□ -1.94
RPA43YOR340C RPL24AP04449 155 aaKnown RBP2.9□□□□□ -1.95
RPA43YOR340C RPC40P07703 335 aaKnown RBP2.9□□□□□ -1.95
RPA43YOR340C CMK2P22517 447 aa2.9□□□□□ -1.95
RPA43YOR340C PBN1P25580 416 aa2.9□□□□□ -1.95
RPA43YOR340C DAL80P26343 269 aa2.9□□□□□ -1.95
RPA43YOR340C PEX3P28795 441 aa2.9□□□□□ -1.95
RPA43YOR340C DEG1P31115 442 aaKnown RBP2.9□□□□□ -1.95
RPA43YOR340C GDH2P33327 1092 aaKnown RBP2.9□□□□□ -1.95
RPA43YOR340C RTC2P38279 296 aa2.9□□□□□ -1.95
RPA43YOR340C FZO1P38297 855 aa2.9□□□□□ -1.95
RPA43YOR340C BIG1P38813 335 aa2.9□□□□□ -1.95
RPA43YOR340C YPI1P43587 155 aa2.9□□□□□ -1.95
RPA43YOR340C YJR085CP47131 105 aaKnown RBP2.9□□□□□ -1.95
RPA43YOR340C DBP6P53734 629 aaKnown RBP2.9□□□□□ -1.95
RPA43YOR340C ERV25P54837 211 aaKnown RBP2.9□□□□□ -1.95
RPA43YOR340C SNX41Q04053 625 aa2.9□□□□□ -1.95
RPA43YOR340C DCR2Q05924 578 aa2.9□□□□□ -1.95
RPA43YOR340C YLR446WQ06204 433 aa2.9□□□□□ -1.95
RPA43YOR340C MRPL35Q06678 367 aa2.9□□□□□ -1.95
RPA43YOR340C LOT6Q07923 191 aa2.9□□□□□ -1.95
RPA43YOR340C RRT8Q08219 342 aa2.9□□□□□ -1.95
RPA43YOR340C PFK27Q12471 397 aaPredicted RBP2.9□□□□□ -1.95
RPA43YOR340C PCL9Q12477 304 aa2.9□□□□□ -1.95
RPA43YOR340C ADF1Q2V2Q1 113 aa2.9□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms