RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W RPB9P27999 122 aa1.78□□□□□ -2.13
RRP6YOR001W CAT2P32796 670 aaKnown RBP1.78□□□□□ -2.13
RRP6YOR001W SGE1P33335 543 aa1.78□□□□□ -2.13
RRP6YOR001W SRY1P36007 326 aa1.78□□□□□ -2.13
RRP6YOR001W SMP1P38128 452 aa1.78□□□□□ -2.13
RRP6YOR001W YHB1P39676 399 aaKnown RBP1.78□□□□□ -2.13
RRP6YOR001W YPI1P43587 155 aa1.78□□□□□ -2.13
RRP6YOR001W IGD1P43598 195 aa1.78□□□□□ -2.13
RRP6YOR001W PRP24P49960 444 aaKnown RBP1.78□□□□□ -2.13
RRP6YOR001W SLX9P53251 210 aaPredicted RBP1.78□□□□□ -2.13
RRP6YOR001W SNZ2P53824 298 aa1.78□□□□□ -2.13
RRP6YOR001W FYV6P53913 173 aa1.78□□□□□ -2.13
RRP6YOR001W YNL046WP53956 172 aa1.78□□□□□ -2.13
RRP6YOR001W PEX10Q05568 337 aa1.78□□□□□ -2.13
RRP6YOR001W ECM19Q06011 112 aa1.78□□□□□ -2.13
RRP6YOR001W SYC1Q08553 188 aaPredicted RBP1.78□□□□□ -2.13
RRP6YOR001W RRG7Q08774 242 aaPredicted RBP1.78□□□□□ -2.13
RRP6YOR001W RAX2Q12465 1220 aa1.78□□□□□ -2.13
RRP6YOR001W URA6P15700 204 aa1.77□□□□□ -2.13
RRP6YOR001W MRPL27P36526 146 aaPredicted RBP1.77□□□□□ -2.13
RRP6YOR001W YHL044WP38727 235 aa1.77□□□□□ -2.13
RRP6YOR001W TRM5P38793 499 aa1.77□□□□□ -2.13
RRP6YOR001W FMP48P53233 369 aa1.77□□□□□ -2.13
RRP6YOR001W YDR115WQ04598 105 aa1.77□□□□□ -2.13
RRP6YOR001W LIP2Q06005 328 aa1.77□□□□□ -2.13
RRP6YOR001W YPR147CQ06522 304 aaKnown RBP1.77□□□□□ -2.13
RRP6YOR001W YNG1Q08465 219 aa1.77□□□□□ -2.13
RRP6YOR001W YOR186WQ08560 144 aa1.77□□□□□ -2.13
RRP6YOR001W YPL278CQ08990 100 aa1.77□□□□□ -2.13
RRP6YOR001W GPM2Q12008 311 aa1.77□□□□□ -2.13
RRP6YOR001W DFM1Q12743 341 aaKnown RBP1.77□□□□□ -2.13
RRP6YOR001W SNF6P18888 332 aa1.76□□□□□ -2.13
RRP6YOR001W IMP1P28627 190 aa1.76□□□□□ -2.13
RRP6YOR001W DBP7P36120 742 aaKnown RBP1.76□□□□□ -2.13
RRP6YOR001W SUR2P38992 349 aa1.76□□□□□ -2.13
RRP6YOR001W AVT6P40074 448 aa1.76□□□□□ -2.13
RRP6YOR001W POG1P40473 351 aa1.76□□□□□ -2.13
RRP6YOR001W YGL260WP53056 76 aa1.76□□□□□ -2.13
RRP6YOR001W PDR17P53844 350 aa1.76□□□□□ -2.13
RRP6YOR001W RPL21AQ02753 160 aaKnown RBP1.76□□□□□ -2.13
RRP6YOR001W YMR279CQ03263 540 aa1.76□□□□□ -2.13
RRP6YOR001W YTH1Q06102 208 aaPredicted RBP1.76□□□□□ -2.13
RRP6YOR001W YET3Q07451 203 aa1.76□□□□□ -2.13
RRP6YOR001W HEM25Q07534 307 aa1.76□□□□□ -2.13
RRP6YOR001W MRX4Q12467 430 aa1.76□□□□□ -2.13
RRP6YOR001W SIR4P11978 1358 aa1.76□□□□□ -2.13
RRP6YOR001W YHR139C-AO13536 103 aa1.76□□□□□ -2.13
RRP6YOR001W PPH21P23594 369 aa1.76□□□□□ -2.13
RRP6YOR001W AST1P35183 429 aa1.76□□□□□ -2.13
RRP6YOR001W CSG2P35206 410 aa1.76□□□□□ -2.13
RRP6YOR001W MRPL39P36533 70 aa1.76□□□□□ -2.13
RRP6YOR001W FES1P38260 290 aa1.76□□□□□ -2.13
RRP6YOR001W PEX17P40155 199 aa1.76□□□□□ -2.13
RRP6YOR001W YMR144WP40214 342 aaKnown RBP1.76□□□□□ -2.13
RRP6YOR001W DID2P69771 204 aa1.76□□□□□ -2.13
RRP6YOR001W MRS2Q01926 470 aa1.76□□□□□ -2.13
RRP6YOR001W YDR124WQ04608 324 aa1.76□□□□□ -2.13
RRP6YOR001W CDD1Q06549 142 aa1.76□□□□□ -2.13
RRP6YOR001W GRE1Q08969 168 aa1.76□□□□□ -2.13
RRP6YOR001W WTM1Q12363 437 aaKnown RBP1.76□□□□□ -2.13
RRP6YOR001W PSK1P31374 1356 aa1.76□□□□□ -2.13
RRP6YOR001W SEC4P07560 215 aaKnown RBP1.75□□□□□ -2.13
RRP6YOR001W FBA1P14540 359 aaKnown RBP1.75□□□□□ -2.13
RRP6YOR001W ERG2P32352 222 aa1.75□□□□□ -2.13
RRP6YOR001W EDC2P40023 145 aaPredicted RBP1.75□□□□□ -2.13
RRP6YOR001W CCH1P50077 2039 aa1.75□□□□□ -2.13
RRP6YOR001W UFD1P53044 361 aa1.75□□□□□ -2.13
RRP6YOR001W YGR018CP53211 109 aa1.75□□□□□ -2.13
RRP6YOR001W INP1Q03694 420 aa1.75□□□□□ -2.13
RRP6YOR001W TSA2Q04120 196 aa1.75□□□□□ -2.13
RRP6YOR001W YAL067W-AQ8TGK6 75 aa1.75□□□□□ -2.13
RRP6YOR001W COX4P04037 155 aa1.75□□□□□ -2.13
RRP6YOR001W UBC6P33296 250 aaPredicted RBP1.75□□□□□ -2.13
RRP6YOR001W ZRT3P34240 503 aa1.75□□□□□ -2.13
RRP6YOR001W MRPL28P36527 147 aa1.75□□□□□ -2.13
RRP6YOR001W GPI18P38211 433 aa1.75□□□□□ -2.13
RRP6YOR001W SHG1P38337 142 aa1.75□□□□□ -2.13
RRP6YOR001W GRE3P38715 327 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
RRP6YOR001W ASP1P38986 381 aaPredicted RBP1.75□□□□□ -2.13
RRP6YOR001W MTW1P39731 289 aa1.75□□□□□ -2.13
RRP6YOR001W YIL012WP40551 113 aa1.75□□□□□ -2.13
RRP6YOR001W MMS2P53152 137 aa1.75□□□□□ -2.13
RRP6YOR001W JAC1P53193 184 aa1.75□□□□□ -2.13
RRP6YOR001W YIP3P53633 176 aa1.75□□□□□ -2.13
RRP6YOR001W GOT1Q03554 138 aa1.75□□□□□ -2.13
RRP6YOR001W MSA1Q08471 629 aa1.75□□□□□ -2.13
RRP6YOR001W ATG5Q12380 294 aa1.75□□□□□ -2.13
RRP6YOR001W ECM13P38195 257 aa1.74□□□□□ -2.13
RRP6YOR001W PHO89P38361 574 aa1.74□□□□□ -2.13
RRP6YOR001W ARN2P38724 620 aa1.74□□□□□ -2.13
RRP6YOR001W COG3P40094 801 aa1.74□□□□□ -2.13
RRP6YOR001W SYS1P41544 203 aa1.74□□□□□ -2.13
RRP6YOR001W FAR7P43592 221 aa1.74□□□□□ -2.13
RRP6YOR001W BXI1P48558 297 aa1.74□□□□□ -2.13
RRP6YOR001W YNL140CP53910 189 aa1.74□□□□□ -2.13
RRP6YOR001W YOL029CQ08187 201 aa1.74□□□□□ -2.13
RRP6YOR001W USB1Q12208 290 aaKnown RBP1.74□□□□□ -2.13
RRP6YOR001W SMT3Q12306 101 aaKnown RBP1.74□□□□□ -2.13
RRP6YOR001W TIM22Q12328 207 aa1.74□□□□□ -2.13
RRP6YOR001W EMP46Q12396 444 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms