RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeastyeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCL1YOL010W TRS65P32893 560 aa3.96□□□□□ -1.78
RCL1YOL010W ECM15P35195 104 aa3.96□□□□□ -1.78
RCL1YOL010W YBR184WP38299 523 aa3.96□□□□□ -1.78
RCL1YOL010W RRP4P38792 359 aaKnown RBP3.96□□□□□ -1.78
RCL1YOL010W WSS1P38838 269 aa3.96□□□□□ -1.78
RCL1YOL010W QRI7P43122 407 aa3.96□□□□□ -1.78
RCL1YOL010W DPB11P47027 764 aaPredicted RBP3.96□□□□□ -1.78
RCL1YOL010W YJR056CP47115 236 aa3.96□□□□□ -1.78
RCL1YOL010W YGL204CP53089 101 aa3.96□□□□□ -1.78
RCL1YOL010W YGR168CP53293 376 aa3.96□□□□□ -1.78
RCL1YOL010W TPS1Q00764 495 aaKnown RBP3.96□□□□□ -1.78
RCL1YOL010W RNH202Q05635 350 aa3.96□□□□□ -1.78
RCL1YOL010W DXO1Q06349 442 aa3.96□□□□□ -1.78
RCL1YOL010W YPR127WQ06494 345 aa3.96□□□□□ -1.78
RCL1YOL010W GAT3Q07928 141 aa3.96□□□□□ -1.78
RCL1YOL010W COQ10Q08058 207 aa3.96□□□□□ -1.78
RCL1YOL010W NIP7Q08962 181 aaKnown RBP3.96□□□□□ -1.78
RCL1YOL010W THP3Q12049 470 aaKnown RBP3.96□□□□□ -1.78
RCL1YOL010W YCL048W-AQ2V2Q2 79 aa3.96□□□□□ -1.78
RCL1YOL010W TIM12P32830 109 aa3.95□□□□□ -1.78
RCL1YOL010W CLB6P32943 380 aa3.95□□□□□ -1.78
RCL1YOL010W CLG1P35190 452 aa3.95□□□□□ -1.78
RCL1YOL010W JEN1P36035 616 aa3.95□□□□□ -1.78
RCL1YOL010W SRP102P36057 244 aaPredicted RBP3.95□□□□□ -1.78
RCL1YOL010W SDH8P38345 138 aa3.95□□□□□ -1.78
RCL1YOL010W LSM12P38828 187 aaKnown RBP3.95□□□□□ -1.78
RCL1YOL010W FLO5P38894 1075 aa3.95□□□□□ -1.78
RCL1YOL010W SEC72P39742 193 aaKnown RBP3.95□□□□□ -1.78
RCL1YOL010W PAC2P39937 518 aa3.95□□□□□ -1.78
RCL1YOL010W YER085CP40058 173 aa3.95□□□□□ -1.78
RCL1YOL010W TAX4P47030 604 aa3.95□□□□□ -1.78
RCL1YOL010W ILM1P47155 203 aa3.95□□□□□ -1.78
RCL1YOL010W RBL2P48606 106 aaKnown RBP3.95□□□□□ -1.78
RCL1YOL010W YGL235WP53071 178 aa3.95□□□□□ -1.78
RCL1YOL010W NSA1P53136 463 aaPredicted RBP3.95□□□□□ -1.78
RCL1YOL010W YNL046WP53956 172 aa3.95□□□□□ -1.78
RCL1YOL010W YMR279CQ03263 540 aa3.95□□□□□ -1.78
RCL1YOL010W BNA7Q04066 261 aa3.95□□□□□ -1.78
RCL1YOL010W GMC1Q04399 608 aa3.95□□□□□ -1.78
RCL1YOL010W TPO3Q06451 622 aa3.95□□□□□ -1.78
RCL1YOL010W GPI11Q06636 219 aa3.95□□□□□ -1.78
RCL1YOL010W SNX3Q08826 162 aaKnown RBP3.95□□□□□ -1.78
RCL1YOL010W BTS1Q12051 335 aa3.95□□□□□ -1.78
RCL1YOL010W WTM1Q12363 437 aaKnown RBP3.95□□□□□ -1.78
RCL1YOL010W RTN2Q12443 393 aa3.95□□□□□ -1.78
RCL1YOL010W MRPL23Q12487 163 aaPredicted RBP3.95□□□□□ -1.78
RCL1YOL010W KIN28P06242 306 aa3.94□□□□□ -1.78
RCL1YOL010W EXG1P23776 448 aaKnown RBP3.94□□□□□ -1.78
RCL1YOL010W VAM7P32912 316 aa3.94□□□□□ -1.78
RCL1YOL010W CDS1P38221 457 aa3.94□□□□□ -1.78
RCL1YOL010W FIG1P38224 298 aa3.94□□□□□ -1.78
RCL1YOL010W GDT1P38301 280 aaPredicted RBP3.94□□□□□ -1.78
RCL1YOL010W PSD1P39006 500 aa3.94□□□□□ -1.78
RCL1YOL010W GZF3P42944 551 aaKnown RBP3.94□□□□□ -1.78
RCL1YOL010W OTU1P43558 301 aa3.94□□□□□ -1.78
RCL1YOL010W SSY5P47002 699 aa3.94□□□□□ -1.78
RCL1YOL010W AIM24P47127 394 aa3.94□□□□□ -1.78
RCL1YOL010W BAT2P47176 376 aaKnown RBP3.94□□□□□ -1.78
RCL1YOL010W COS1P53822 381 aa3.94□□□□□ -1.78
RCL1YOL010W YNL095CP53932 642 aa3.94□□□□□ -1.78
RCL1YOL010W YKR005CQ02203 525 aa3.94□□□□□ -1.78
RCL1YOL010W YPL108WQ02872 168 aaPredicted RBP3.94□□□□□ -1.78
RCL1YOL010W NGL2Q03264 515 aaKnown RBP3.94□□□□□ -1.78
RCL1YOL010W YMD8Q03697 442 aa3.94□□□□□ -1.78
RCL1YOL010W ACL4Q03771 387 aa3.94□□□□□ -1.78
RCL1YOL010W MSC3Q05812 728 aa3.94□□□□□ -1.78
RCL1YOL010W SNT309Q06091 175 aaPredicted RBP3.94□□□□□ -1.78
RCL1YOL010W TAZ1Q06510 381 aa3.94□□□□□ -1.78
RCL1YOL010W SRL1Q08673 210 aa3.94□□□□□ -1.78
RCL1YOL010W FIT3Q08907 204 aa3.94□□□□□ -1.78
RCL1YOL010W RLM1Q12224 676 aa3.94□□□□□ -1.78
RCL1YOL010W BBP1Q12365 385 aa3.94□□□□□ -1.78
RCL1YOL010W YOR343CQ12484 108 aa3.94□□□□□ -1.78
RCL1YOL010W YCL001W-BQ96VH2 84 aa3.94□□□□□ -1.78
RCL1YOL010W RPL25P04456 142 aaKnown RBP3.93□□□□□ -1.78
RCL1YOL010W CNA1P23287 553 aa3.93□□□□□ -1.78
RCL1YOL010W MIG1P27705 504 aa3.93□□□□□ -1.78
RCL1YOL010W IDH1P28834 360 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
RCL1YOL010W TFC1P32367 649 aa3.93□□□□□ -1.78
RCL1YOL010W SPT10P35208 640 aa3.93□□□□□ -1.78
RCL1YOL010W YKL071WP36086 256 aa3.93□□□□□ -1.78
RCL1YOL010W SKG1P36169 355 aa3.93□□□□□ -1.78
RCL1YOL010W RIB1P38066 345 aa3.93□□□□□ -1.78
RCL1YOL010W YBR241CP38142 488 aa3.93□□□□□ -1.78
RCL1YOL010W KRE29P40026 464 aa3.93□□□□□ -1.78
RCL1YOL010W YNL195CP40168 261 aa3.93□□□□□ -1.78
RCL1YOL010W MPM1P40364 252 aa3.93□□□□□ -1.78
RCL1YOL010W YGL101WP53144 215 aa3.93□□□□□ -1.78
RCL1YOL010W ERP6P53198 216 aa3.93□□□□□ -1.78
RCL1YOL010W YNR062CP53748 327 aa3.93□□□□□ -1.78
RCL1YOL010W DIA1P54005 336 aa3.93□□□□□ -1.78
RCL1YOL010W FIN1Q03898 291 aa3.93□□□□□ -1.78
RCL1YOL010W SNO4Q04902 237 aa3.93□□□□□ -1.78
RCL1YOL010W LUC7Q07508 261 aaPredicted RBP3.93□□□□□ -1.78
RCL1YOL010W HSP33Q08914 237 aaKnown RBP3.93□□□□□ -1.78
RCL1YOL010W HSP32Q08992 237 aa3.93□□□□□ -1.78
RCL1YOL010W TIM9O74700 87 aa3.92□□□□□ -1.78
RCL1YOL010W RPS16AP0CX51 143 aaKnown RBP3.92□□□□□ -1.78
RCL1YOL010W RPS16BP0CX52 143 aaKnown RBP3.92□□□□□ -1.78
RCL1YOL010W SEC12P11655 471 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms