RNA–Protein interactions for RNA: YKL125W

RRN3, Transcript of Protein required for transcription of rDNA by RNA polymerase I, yeast

Gene RRN3, Length 1,884 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN3	YKL125W	COT1	P32798	439 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	LSM2	P38203	95 aa	Known RBP	4.81	□□□□□ -1.64
RRN3	YKL125W	LDB7	P38210	180 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	CHL4	P38907	458 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	GAA1	P39012	614 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	EMC5	P40540	141 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	POP1	P41812	875 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	AIM25	P47140	327 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	YGR149W	P48236	432 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	YIF1	P53845	314 aa	Known RBP	4.81	□□□□□ -1.64
RRN3	YKL125W	GIS1	Q03833	894 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	CNL1	Q06333	122 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	HEM25	Q07534	307 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	RRG1	Q12167	365 aa	Predicted RBP	4.81	□□□□□ -1.64
RRN3	YKL125W	RPL13A	Q12690	199 aa	Predicted RBP	4.81	□□□□□ -1.64
RRN3	YKL125W	ILV5	P06168	395 aa	Known RBP	4.81	□□□□□ -1.64
RRN3	YKL125W	MSF1	P08425	469 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	BGL2	P15703	313 aa	Known RBP	4.81	□□□□□ -1.64
RRN3	YKL125W	MEK1	P24719	497 aa	Predicted RBP	4.81	□□□□□ -1.64
RRN3	YKL125W	FEN2	P25621	512 aa	Known RBP	4.81	□□□□□ -1.64
RRN3	YKL125W	AAR2	P32357	355 aa	Predicted RBP	4.81	□□□□□ -1.64
RRN3	YKL125W	RIM1	P32445	135 aa	Known RBP	4.81	□□□□□ -1.64
RRN3	YKL125W	RTC2	P38279	296 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	COA1	P40452	197 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	PAM16	P42949	149 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	ASI3	P53983	676 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	SMX3	P54999	86 aa	Predicted RBP	4.81	□□□□□ -1.64
RRN3	YKL125W	RSM23	Q01163	450 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	INM2	Q05533	292 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	CTR3	Q06686	241 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	THI72	Q08579	599 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	MCA1	Q08601	432 aa		4.81	□□□□□ -1.64
RRN3	YKL125W	FCF2	Q12035	217 aa	Predicted RBP	4.81	□□□□□ -1.64
RRN3	YKL125W	QCR2	P07257	368 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	GAL7	P08431	366 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	TIR1	P10863	254 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
RRN3	YKL125W	SAG1	P20840	650 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	SGF29	P25554	259 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	UPS2	P35200	230 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	AXL2	P38928	823 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	SHO1	P40073	367 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	RRG9	P40156	214 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	NIT1	P40447	199 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	HMS2	P47175	358 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	NIF3	P53081	288 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	VPS73	P53142	486 aa	Known RBP	4.8	□□□□□ -1.64
RRN3	YKL125W	YAP1802	P53309	568 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	YNL260C	P53846	198 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	TPS1	Q00764	495 aa	Known RBP	4.8	□□□□□ -1.64
RRN3	YKL125W	ELC1	Q03071	99 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	EST3	Q03096	181 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	YMR087W	Q04299	284 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	YML053C	Q04978	212 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	YOL114C	Q12322	202 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	YLR118C	Q12354	227 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	YIR021W-A	Q3E739	70 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	ECM29	P38737	1868 aa		4.8	□□□□□ -1.64
RRN3	YKL125W	MBF1	O14467	151 aa	Known RBP	4.79	□□□□□ -1.64
RRN3	YKL125W	TDH2	P00358	332 aa	Known RBP	4.79	□□□□□ -1.64
RRN3	YKL125W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
RRN3	YKL125W	SPT15	P13393	240 aa	Known RBP	4.79	□□□□□ -1.64
RRN3	YKL125W	CBS1	P14066	229 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	NOP1	P15646	327 aa	Known RBP	4.79	□□□□□ -1.64
RRN3	YKL125W	OAC1	P32332	324 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	MNS1	P32906	549 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	TIP20	P33891	701 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	PMU1	P36069	295 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	YBR063C	P38083	404 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	SPG5	P42933	373 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	BIT61	P47041	543 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	PMT3	P47190	753 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	BNS1	P50084	137 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	THG1	P53215	237 aa	Known RBP	4.79	□□□□□ -1.64
RRN3	YKL125W	YNR014W	P53719	212 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	RCR2	Q03446	210 aa	Known RBP	4.79	□□□□□ -1.64
RRN3	YKL125W	EMI1	Q04406	187 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	YLR446W	Q06204	433 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	PAU23	Q07987	124 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	IRC10	Q08118	586 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	IRC13	Q08630	104 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	YPL260W	Q08977	551 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	ALG6	Q12001	544 aa	Known RBP	4.79	□□□□□ -1.64
RRN3	YKL125W	TIR4	Q12218	487 aa	Predicted RBP	4.79	□□□□□ -1.64
RRN3	YKL125W	PAU17	Q12370	124 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	COX3	P00420	269 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	RAS2	P01120	322 aa	Known RBP	4.79	□□□□□ -1.64
RRN3	YKL125W	PAU19	P0CE85	124 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	PAU21	P0CE86	164 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	PAU22	P0CE87	164 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	UBI4	P0CG63	381 aa	Known RBP	4.79	□□□□□ -1.64
RRN3	YKL125W	RPB5	P20434	215 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	DAL82	P21705	255 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	PAU3	P25610	124 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	URK1	P27515	501 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	CUE1	P38428	203 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	WSC4	P38739	605 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	ARO9	P38840	513 aa	Predicted RBP	4.79	□□□□□ -1.64
RRN3	YKL125W	MOB1	P40484	314 aa		4.79	□□□□□ -1.64
RRN3	YKL125W	CAT5	P41735	233 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 65.5 ms