RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W SUA5P32579 426 aa1.09□□□□□ -2.23
HIT1YJR055W POP8P38208 133 aa1.09□□□□□ -2.23
HIT1YJR055W SPL2P38839 148 aa1.09□□□□□ -2.23
HIT1YJR055W YER084WP40057 128 aa1.09□□□□□ -2.23
HIT1YJR055W SHQ1P40486 507 aaPredicted RBP1.09□□□□□ -2.23
HIT1YJR055W UFD1P53044 361 aa1.09□□□□□ -2.23
HIT1YJR055W SYF2P53277 215 aaPredicted RBP1.09□□□□□ -2.23
HIT1YJR055W ACT1P60010 375 aaKnown RBP1.09□□□□□ -2.23
HIT1YJR055W OSH6Q02201 448 aa1.09□□□□□ -2.23
HIT1YJR055W YML018CQ03730 393 aa1.09□□□□□ -2.23
HIT1YJR055W TVP15Q03860 143 aa1.09□□□□□ -2.23
HIT1YJR055W SFH1Q06168 426 aa1.09□□□□□ -2.23
HIT1YJR055W CTR3Q06686 241 aa1.09□□□□□ -2.23
HIT1YJR055W PRR2Q12310 699 aa1.09□□□□□ -2.23
HIT1YJR055W ISD11Q6Q560 94 aa1.09□□□□□ -2.23
HIT1YJR055W SSK22P25390 1331 aaPredicted RBP1.09□□□□□ -2.24
HIT1YJR055W MSB2P32334 1306 aa1.09□□□□□ -2.24
HIT1YJR055W MYO1P08964 1928 aa1.09□□□□□ -2.24
HIT1YJR055W DUR1,2P32528 1835 aaKnown RBP1.08□□□□□ -2.24
HIT1YJR055W ATP6P00854 259 aa1.08□□□□□ -2.24
HIT1YJR055W MEK1P24719 497 aaPredicted RBP1.08□□□□□ -2.24
HIT1YJR055W EBP2P36049 427 aaKnown RBP1.08□□□□□ -2.24
HIT1YJR055W YKL070WP36087 169 aa1.08□□□□□ -2.24
HIT1YJR055W MRPL37P36532 105 aa1.08□□□□□ -2.24
HIT1YJR055W TRM7P38238 310 aaKnown RBP1.08□□□□□ -2.24
HIT1YJR055W SPT8P38915 602 aa1.08□□□□□ -2.24
HIT1YJR055W CDC40P40968 455 aaPredicted RBP1.08□□□□□ -2.24
HIT1YJR055W TAD2P47058 250 aa1.08□□□□□ -2.24
HIT1YJR055W DSK2P48510 373 aa1.08□□□□□ -2.24
HIT1YJR055W NIF3P53081 288 aa1.08□□□□□ -2.24
HIT1YJR055W YGL185CP53100 379 aa1.08□□□□□ -2.24
HIT1YJR055W MND1P53102 219 aa1.08□□□□□ -2.24
HIT1YJR055W SPP2Q02521 185 aa1.08□□□□□ -2.24
HIT1YJR055W VPS60Q03390 229 aa1.08□□□□□ -2.24
HIT1YJR055W ERV41Q04651 352 aa1.08□□□□□ -2.24
HIT1YJR055W PEX10Q05568 337 aa1.08□□□□□ -2.24
HIT1YJR055W RDS3Q06835 107 aaPredicted RBP1.08□□□□□ -2.24
HIT1YJR055W YDL144CQ07589 356 aa1.08□□□□□ -2.24
HIT1YJR055W YOL019WQ08157 551 aa1.08□□□□□ -2.24
HIT1YJR055W YOR114WQ12219 294 aa1.08□□□□□ -2.24
HIT1YJR055W PST1Q12355 444 aa1.08□□□□□ -2.24
HIT1YJR055W YAL063C-AQ3E791 96 aa1.08□□□□□ -2.24
HIT1YJR055W YBR056W-AI2HB52 66 aa1.07□□□□□ -2.24
HIT1YJR055W HIS1P00498 297 aaKnown RBP1.07□□□□□ -2.24
HIT1YJR055W RPL24AP04449 155 aaKnown RBP1.07□□□□□ -2.24
HIT1YJR055W RPL4AP10664 362 aaKnown RBP1.07□□□□□ -2.24
HIT1YJR055W MET16P18408 261 aaPredicted RBP1.07□□□□□ -2.24
HIT1YJR055W SSH1P38353 490 aaKnown RBP1.07□□□□□ -2.24
HIT1YJR055W YHL044WP38727 235 aa1.07□□□□□ -2.24
HIT1YJR055W YHI9P38765 294 aa1.07□□□□□ -2.24
HIT1YJR055W SUR2P38992 349 aa1.07□□□□□ -2.24
HIT1YJR055W RPL4BP49626 362 aaKnown RBP1.07□□□□□ -2.24
HIT1YJR055W TPN1P53099 579 aa1.07□□□□□ -2.24
HIT1YJR055W SLX9P53251 210 aaPredicted RBP1.07□□□□□ -2.24
HIT1YJR055W SEC10Q06245 871 aa1.07□□□□□ -2.24
HIT1YJR055W ATG5Q12380 294 aa1.07□□□□□ -2.24
HIT1YJR055W MLP1Q02455 1875 aaKnown RBP1.07□□□□□ -2.24
HIT1YJR055W YLR422WQ06409 1932 aa1.07□□□□□ -2.24
HIT1YJR055W YAL064W-BO13512 126 aa1.06□□□□□ -2.24
HIT1YJR055W TDH1P00360 332 aaKnown RBP1.06□□□□□ -2.24
HIT1YJR055W PET494P07390 489 aaPredicted RBP1.06□□□□□ -2.24
HIT1YJR055W SSA3P09435 649 aaKnown RBP1.06□□□□□ -2.24
HIT1YJR055W RPL43AP0CX25 92 aaKnown RBP1.06□□□□□ -2.24
HIT1YJR055W RPL43BP0CX26 92 aa1.06□□□□□ -2.24
HIT1YJR055W BMH1P29311 267 aaKnown RBP1.06□□□□□ -2.24
HIT1YJR055W COY1P34237 679 aa1.06□□□□□ -2.24
HIT1YJR055W MAL32P38158 584 aa1.06□□□□□ -2.24
HIT1YJR055W HEK2P38199 381 aaKnown RBP RIP-Chip data1.06□□□□□ -2.24not detected
HIT1YJR055W HSM3P38348 480 aa1.06□□□□□ -2.24
HIT1YJR055W VPS45P38932 577 aa1.06□□□□□ -2.24
HIT1YJR055W RTR1P40084 226 aaPredicted RBP1.06□□□□□ -2.24
HIT1YJR055W MPP10P47083 593 aaKnown RBP1.06□□□□□ -2.24
HIT1YJR055W YJR012CP47087 207 aa1.06□□□□□ -2.24
HIT1YJR055W YJR141WP47172 347 aaPredicted RBP1.06□□□□□ -2.24
HIT1YJR055W MAL12P53341 584 aa1.06□□□□□ -2.24
HIT1YJR055W YDR209CQ03480 137 aa1.06□□□□□ -2.24
HIT1YJR055W GRH1Q04410 372 aaKnown RBP1.06□□□□□ -2.24
HIT1YJR055W SPO77Q06134 477 aa1.06□□□□□ -2.24
HIT1YJR055W FEX1Q08913 375 aa1.06□□□□□ -2.24
HIT1YJR055W FEX2Q08991 375 aa1.06□□□□□ -2.24
HIT1YJR055W BTS1Q12051 335 aa1.06□□□□□ -2.24
HIT1YJR055W FMP16Q12497 93 aa1.06□□□□□ -2.24
HIT1YJR055W SWI1P09547 1314 aa1.06□□□□□ -2.24
HIT1YJR055W HFA1P32874 2273 aa1.05□□□□□ -2.24
HIT1YJR055W RIF1P29539 1916 aa1.05□□□□□ -2.24
HIT1YJR055W RPS3P05750 240 aaKnown RBP1.05□□□□□ -2.24
HIT1YJR055W HIS3P06633 220 aa1.05□□□□□ -2.24
HIT1YJR055W PEX3P28795 441 aa1.05□□□□□ -2.24
HIT1YJR055W CSG2P35206 410 aa1.05□□□□□ -2.24
HIT1YJR055W RPL10P41805 221 aaKnown RBP1.05□□□□□ -2.24
HIT1YJR055W GCD14P46959 383 aaPredicted RBP1.05□□□□□ -2.24
HIT1YJR055W MPP6P53725 186 aaPredicted RBP1.05□□□□□ -2.24
HIT1YJR055W FMP41P53889 259 aaKnown RBP1.05□□□□□ -2.24
HIT1YJR055W ALG11P53954 548 aaKnown RBP1.05□□□□□ -2.24
HIT1YJR055W VBA1Q04301 562 aa1.05□□□□□ -2.24
HIT1YJR055W ECM18Q04623 453 aa1.05□□□□□ -2.24
HIT1YJR055W GMC2Q06201 188 aa1.05□□□□□ -2.24
HIT1YJR055W SUE1Q06524 206 aa1.05□□□□□ -2.24
HIT1YJR055W YOS9Q99220 542 aa1.05□□□□□ -2.24
HIT1YJR055W LAA1P39526 2014 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms