RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W GDS1P41913 522 aa1.76□□□□□ -2.13
RTT107YHR154W YJR054WP47114 497 aa1.76□□□□□ -2.13
RTT107YHR154W HOC1P47124 396 aa1.76□□□□□ -2.13
RTT107YHR154W YDR476CQ03362 224 aa1.76□□□□□ -2.13
RTT107YHR154W VHS1Q03785 461 aa1.76□□□□□ -2.13
RTT107YHR154W GAS2Q06135 555 aa1.76□□□□□ -2.13
RTT107YHR154W ESA1Q08649 445 aa1.76□□□□□ -2.13
RTT107YHR154W YDL009CQ12210 107 aa1.76□□□□□ -2.13
RTT107YHR154W QCR7P00128 127 aa1.76□□□□□ -2.13
RTT107YHR154W MRPL20P22354 195 aaPredicted RBP1.76□□□□□ -2.13
RTT107YHR154W TRX3P25372 127 aa1.76□□□□□ -2.13
RTT107YHR154W GRE3P38715 327 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
RTT107YHR154W CTK3P46963 296 aaPredicted RBP1.76□□□□□ -2.13
RTT107YHR154W LCB3P47013 409 aa1.76□□□□□ -2.13
RTT107YHR154W RPC17P47076 161 aa1.76□□□□□ -2.13
RTT107YHR154W JHD2P47156 728 aaPredicted RBP1.76□□□□□ -2.13
RTT107YHR154W MMS2P53152 137 aa1.76□□□□□ -2.13
RTT107YHR154W MAL13P53338 473 aa1.76□□□□□ -2.13
RTT107YHR154W GMC1Q04399 608 aa1.76□□□□□ -2.13
RTT107YHR154W NNT1Q05874 261 aa1.76□□□□□ -2.13
RTT107YHR154W GRX8Q05926 109 aa1.76□□□□□ -2.13
RTT107YHR154W MHR1Q06630 226 aa1.76□□□□□ -2.13
RTT107YHR154W WTM1Q12363 437 aaKnown RBP1.76□□□□□ -2.13
RTT107YHR154W YMR316C-AI2HB70 103 aa1.76□□□□□ -2.13
RTT107YHR154W HOT13P36078 116 aa1.76□□□□□ -2.13
RTT107YHR154W RFT1P38206 574 aaPredicted RBP1.76□□□□□ -2.13
RTT107YHR154W POG1P40473 351 aa1.76□□□□□ -2.13
RTT107YHR154W BMT5P40493 336 aa1.76□□□□□ -2.13
RTT107YHR154W OST1P41543 476 aaKnown RBP1.76□□□□□ -2.13
RTT107YHR154W HAC1P41546 238 aa1.76□□□□□ -2.13
RTT107YHR154W CIS3P47001 227 aa1.76□□□□□ -2.13
RTT107YHR154W YJR079WP47126 109 aa1.76□□□□□ -2.13
RTT107YHR154W NUP57P48837 541 aa1.76□□□□□ -2.13
RTT107YHR154W TRM9P49957 279 aa1.76□□□□□ -2.13
RTT107YHR154W SKI8Q02793 397 aaPredicted RBP1.76□□□□□ -2.13
RTT107YHR154W RDL2Q08742 149 aaKnown RBP1.76□□□□□ -2.13
RTT107YHR154W NDD1Q08887 554 aa1.76□□□□□ -2.13
RTT107YHR154W YOR114WQ12219 294 aa1.76□□□□□ -2.13
RTT107YHR154W YCT1Q12235 531 aa1.76□□□□□ -2.13
RTT107YHR154W YLR111WQ12528 110 aa1.76□□□□□ -2.13
RTT107YHR154W CDC8P00572 216 aa1.75□□□□□ -2.13
RTT107YHR154W SPT15P13393 240 aaKnown RBP1.75□□□□□ -2.13
RTT107YHR154W EHD3P28817 500 aa1.75□□□□□ -2.13
RTT107YHR154W VPH2P32341 215 aa1.75□□□□□ -2.13
RTT107YHR154W YBP1P38315 674 aa1.75□□□□□ -2.13
RTT107YHR154W IKS1P47042 667 aa1.75□□□□□ -2.13
RTT107YHR154W YGL260WP53056 76 aa1.75□□□□□ -2.13
RTT107YHR154W YGL204CP53089 101 aa1.75□□□□□ -2.13
RTT107YHR154W CDC14Q00684 551 aa1.75□□□□□ -2.13
RTT107YHR154W ECI1Q05871 280 aa1.75□□□□□ -2.13
RTT107YHR154W LSO2Q3E772 92 aaKnown RBP1.75□□□□□ -2.13
RTT107YHR154W PET20Q99373 253 aa1.75□□□□□ -2.13
RTT107YHR154W TRA1P38811 3744 aa1.75□□□□□ -2.13
RTT107YHR154W JIP3O13555 125 aa1.75□□□□□ -2.13
RTT107YHR154W YAP1P19880 650 aaKnown RBP1.75□□□□□ -2.13
RTT107YHR154W CHA1P25379 360 aaKnown RBP1.75□□□□□ -2.13
RTT107YHR154W TOA2P32774 122 aa1.75□□□□□ -2.13
RTT107YHR154W CDC13P32797 924 aaKnown RBP1.75□□□□□ -2.13
RTT107YHR154W SRP102P36057 244 aaPredicted RBP1.75□□□□□ -2.13
RTT107YHR154W MRP21P38175 177 aa1.75□□□□□ -2.13
RTT107YHR154W YHR127WP38833 243 aaKnown RBP1.75□□□□□ -2.13
RTT107YHR154W SMB1P40018 196 aaKnown RBP1.75□□□□□ -2.13
RTT107YHR154W YMR144WP40214 342 aaKnown RBP1.75□□□□□ -2.13
RTT107YHR154W ALG8P40351 577 aa1.75□□□□□ -2.13
RTT107YHR154W SER33P40510 469 aa1.75□□□□□ -2.13
RTT107YHR154W PRP24P49960 444 aaKnown RBP1.75□□□□□ -2.13
RTT107YHR154W BRR6P53062 197 aa1.75□□□□□ -2.13
RTT107YHR154W FYV6P53913 173 aa1.75□□□□□ -2.13
RTT107YHR154W YLR152CP54072 576 aa1.75□□□□□ -2.13
RTT107YHR154W SNO1Q03144 224 aa1.75□□□□□ -2.13
RTT107YHR154W MZM1Q03429 123 aaPredicted RBP1.75□□□□□ -2.13
RTT107YHR154W YPR147CQ06522 304 aaKnown RBP1.75□□□□□ -2.13
RTT107YHR154W YLR012CQ07927 99 aa1.75□□□□□ -2.13
RTT107YHR154W DCN1Q12395 269 aa1.75□□□□□ -2.13
RTT107YHR154W CPR1P14832 162 aaKnown RBP1.74□□□□□ -2.13
RTT107YHR154W YCR102CP25608 368 aa1.74□□□□□ -2.13
RTT107YHR154W ACP1P32463 125 aa1.74□□□□□ -2.13
RTT107YHR154W UBC6P33296 250 aaPredicted RBP1.74□□□□□ -2.13
RTT107YHR154W HEK2P38199 381 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
RTT107YHR154W SHG1P38337 142 aa1.74□□□□□ -2.13
RTT107YHR154W RCK1P38622 512 aa1.74□□□□□ -2.13
RTT107YHR154W URA8P38627 578 aaPredicted RBP1.74□□□□□ -2.13
RTT107YHR154W MST28P39552 234 aa1.74□□□□□ -2.13
RTT107YHR154W KRE29P40026 464 aa1.74□□□□□ -2.13
RTT107YHR154W YNL208WP40159 199 aaKnown RBP1.74□□□□□ -2.13
RTT107YHR154W PHB1P40961 287 aa1.74□□□□□ -2.13
RTT107YHR154W SNO3P43544 222 aa1.74□□□□□ -2.13
RTT107YHR154W COG7P53195 279 aa1.74□□□□□ -2.13
RTT107YHR154W VHT1P53241 593 aa1.74□□□□□ -2.13
RTT107YHR154W RIM13Q03792 727 aa1.74□□□□□ -2.13
RTT107YHR154W ARO80Q04052 950 aa1.74□□□□□ -2.13
RTT107YHR154W YMR253CQ04835 414 aa1.74□□□□□ -2.13
RTT107YHR154W FSH2Q05015 223 aa1.74□□□□□ -2.13
RTT107YHR154W YDL114WQ07530 308 aa1.74□□□□□ -2.13
RTT107YHR154W YEH2Q07950 538 aa1.74□□□□□ -2.13
RTT107YHR154W RPL23AP0CX41 137 aaKnown RBP1.74□□□□□ -2.13
RTT107YHR154W RPL23BP0CX42 137 aaKnown RBP1.74□□□□□ -2.13
RTT107YHR154W NHP6AP11632 93 aaKnown RBP1.74□□□□□ -2.13
RTT107YHR154W GCY1P14065 312 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
RTT107YHR154W CUP2P15315 225 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 162.3 ms