RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W RLP24Q07915 199 aaKnown RBP1.55□□□□□ -2.16
SMD1YGR074W COQ10Q08058 207 aa1.55□□□□□ -2.16
SMD1YGR074W SYC1Q08553 188 aaPredicted RBP1.55□□□□□ -2.16
SMD1YGR074W VPS21P36017 210 aaKnown RBP1.54□□□□□ -2.16
SMD1YGR074W GOS1P38736 223 aa1.54□□□□□ -2.16
SMD1YGR074W MSS2P40990 351 aa1.54□□□□□ -2.16
SMD1YGR074W YJL028WP47062 111 aa1.54□□□□□ -2.16
SMD1YGR074W ILM1P47155 203 aa1.54□□□□□ -2.16
SMD1YGR074W NSA1P53136 463 aaPredicted RBP1.54□□□□□ -2.16
SMD1YGR074W YPL039WQ03080 316 aa1.54□□□□□ -2.16
SMD1YGR074W YML108WQ03759 105 aa1.54□□□□□ -2.16
SMD1YGR074W BNA7Q04066 261 aa1.54□□□□□ -2.16
SMD1YGR074W YDR222WQ04925 415 aa1.54□□□□□ -2.16
SMD1YGR074W SPO77Q06134 477 aa1.54□□□□□ -2.16
SMD1YGR074W LOA1Q06508 300 aa1.54□□□□□ -2.16
SMD1YGR074W HEM25Q07534 307 aa1.54□□□□□ -2.16
SMD1YGR074W PRM7Q12459 698 aa1.54□□□□□ -2.16
SMD1YGR074W YDL012CQ12489 107 aa1.54□□□□□ -2.16
SMD1YGR074W DRS2P39524 1355 aa1.54□□□□□ -2.16
SMD1YGR074W THP2O13539 261 aaKnown RBP1.53□□□□□ -2.16
SMD1YGR074W IPP1P00817 287 aaKnown RBP1.53□□□□□ -2.16
SMD1YGR074W RHO1P06780 209 aaKnown RBP1.53□□□□□ -2.16
SMD1YGR074W RPS23AP0CX29 145 aaKnown RBP1.53□□□□□ -2.16
SMD1YGR074W RPS23BP0CX30 145 aa1.53□□□□□ -2.16
SMD1YGR074W ZWF1P11412 505 aaKnown RBP1.53□□□□□ -2.16
SMD1YGR074W STE18P18852 110 aa1.53□□□□□ -2.16
SMD1YGR074W COQ1P18900 473 aa1.53□□□□□ -2.16
SMD1YGR074W CDC10P25342 322 aaKnown RBP1.53□□□□□ -2.16
SMD1YGR074W PBN1P25580 416 aa1.53□□□□□ -2.16
SMD1YGR074W DOA4P32571 926 aa1.53□□□□□ -2.16
SMD1YGR074W GDH2P33327 1092 aaKnown RBP1.53□□□□□ -2.16
SMD1YGR074W MIC12P38341 106 aa1.53□□□□□ -2.16
SMD1YGR074W YGP1P38616 354 aaKnown RBP1.53□□□□□ -2.16
SMD1YGR074W YRB1P41920 201 aaKnown RBP1.53□□□□□ -2.16
SMD1YGR074W RPC17P47076 161 aa1.53□□□□□ -2.16
SMD1YGR074W JHD2P47156 728 aaPredicted RBP1.53□□□□□ -2.16
SMD1YGR074W MRH4P53166 561 aa1.53□□□□□ -2.16
SMD1YGR074W CTF19Q02732 369 aa1.53□□□□□ -2.16
SMD1YGR074W YMR166CQ03829 368 aa1.53□□□□□ -2.16
SMD1YGR074W YPR011CQ12251 326 aa1.53□□□□□ -2.16
SMD1YGR074W YLR126CQ12288 251 aa1.53□□□□□ -2.16
SMD1YGR074W SEY1Q99287 776 aa1.53□□□□□ -2.16
SMD1YGR074W RPL28P02406 149 aaKnown RBP1.52□□□□□ -2.17
SMD1YGR074W YBR121C-AP0C5L4 52 aa1.52□□□□□ -2.17
SMD1YGR074W YKT6P36015 200 aaKnown RBP1.52□□□□□ -2.17
SMD1YGR074W PRY2P36110 329 aa1.52□□□□□ -2.17
SMD1YGR074W YER189WP40104 122 aa1.52□□□□□ -2.17
SMD1YGR074W YJR141WP47172 347 aaPredicted RBP1.52□□□□□ -2.17
SMD1YGR074W OST3P48439 350 aa1.52□□□□□ -2.17
SMD1YGR074W FYV6P53913 173 aa1.52□□□□□ -2.17
SMD1YGR074W YMR226CQ05016 267 aaKnown RBP1.52□□□□□ -2.17
SMD1YGR074W CDC123Q05791 360 aa1.52□□□□□ -2.17
SMD1YGR074W DCR2Q05924 578 aa1.52□□□□□ -2.17
SMD1YGR074W SSQ1Q05931 657 aaPredicted RBP1.52□□□□□ -2.17
SMD1YGR074W YBL112CQ3E7Y4 105 aa1.52□□□□□ -2.17
SMD1YGR074W NCB2Q92317 146 aa1.52□□□□□ -2.17
SMD1YGR074W HIS3P06633 220 aa1.51□□□□□ -2.17
SMD1YGR074W RAD10P06838 210 aa1.51□□□□□ -2.17
SMD1YGR074W ADH3P07246 375 aaKnown RBP1.51□□□□□ -2.17
SMD1YGR074W MET2P08465 486 aa1.51□□□□□ -2.17
SMD1YGR074W COS2P0CX12 379 aa1.51□□□□□ -2.17
SMD1YGR074W COS3P0CX13 379 aa1.51□□□□□ -2.17
SMD1YGR074W YMR31P19955 123 aa1.51□□□□□ -2.17
SMD1YGR074W RPO26P20435 155 aa1.51□□□□□ -2.17
SMD1YGR074W RSA4P25382 515 aaKnown RBP1.51□□□□□ -2.17
SMD1YGR074W YCR102CP25608 368 aa1.51□□□□□ -2.17
SMD1YGR074W RCN1P36054 211 aa1.51□□□□□ -2.17
SMD1YGR074W YBR096WP38256 230 aa1.51□□□□□ -2.17
SMD1YGR074W COS8P38723 381 aa1.51□□□□□ -2.17
SMD1YGR074W CPR7P47103 393 aa1.51□□□□□ -2.17
SMD1YGR074W MCM22P47167 239 aa1.51□□□□□ -2.17
SMD1YGR074W TRM9P49957 279 aa1.51□□□□□ -2.17
SMD1YGR074W MIC26P50087 233 aa1.51□□□□□ -2.17
SMD1YGR074W RMR1P53060 241 aa1.51□□□□□ -2.17
SMD1YGR074W YGL088WP53151 121 aa1.51□□□□□ -2.17
SMD1YGR074W SYF2P53277 215 aaPredicted RBP1.51□□□□□ -2.17
SMD1YGR074W EMI1Q04406 187 aa1.51□□□□□ -2.17
SMD1YGR074W SEI1Q06058 285 aa1.51□□□□□ -2.17
SMD1YGR074W YLR179CQ06252 201 aaKnown RBP1.51□□□□□ -2.17
SMD1YGR074W YOR186WQ08560 144 aa1.51□□□□□ -2.17
SMD1YGR074W YPL257WQ08974 193 aa1.51□□□□□ -2.17
SMD1YGR074W BBP1Q12365 385 aa1.51□□□□□ -2.17
SMD1YGR074W GEP5Q12393 293 aa1.51□□□□□ -2.17
SMD1YGR074W GIS3Q12418 502 aa1.51□□□□□ -2.17
SMD1YGR074W SWI1P09547 1314 aa1.5□□□□□ -2.17
SMD1YGR074W YLR462WO13556 202 aa1.5□□□□□ -2.17
SMD1YGR074W BCY1P07278 416 aaKnown RBP1.5□□□□□ -2.17
SMD1YGR074W URA6P15700 204 aa1.5□□□□□ -2.17
SMD1YGR074W SEC22P22214 214 aa1.5□□□□□ -2.17
SMD1YGR074W PPH21P23594 369 aa1.5□□□□□ -2.17
SMD1YGR074W RPS5P26783 225 aaKnown RBP1.5□□□□□ -2.17
SMD1YGR074W IDH1P28834 360 aaKnown RBP RIP-Chip data1.5□□□□□ -2.17not detected
SMD1YGR074W AGA2P32781 87 aa1.5□□□□□ -2.17
SMD1YGR074W PRP18P33411 251 aaPredicted RBP1.5□□□□□ -2.17
SMD1YGR074W CBT1P36038 271 aaPredicted RBP1.5□□□□□ -2.17
SMD1YGR074W YKL075CP36083 450 aa1.5□□□□□ -2.17
SMD1YGR074W YKR032WP36127 104 aa1.5□□□□□ -2.17
SMD1YGR074W RIB1P38066 345 aa1.5□□□□□ -2.17
SMD1YGR074W ECM13P38195 257 aa1.5□□□□□ -2.17
SMD1YGR074W YEL075CP39972 122 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms