RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W RPS18AP0CX55 146 aaKnown RBP5.85□□□□□ -1.47
NUP49YGL172W RPS18BP0CX56 146 aaPredicted RBP5.85□□□□□ -1.47
NUP49YGL172W UTP11P34247 250 aaPredicted RBP5.85□□□□□ -1.47
NUP49YGL172W TAT1P38085 619 aa5.85□□□□□ -1.47
NUP49YGL172W YBR137WP38276 179 aa5.85□□□□□ -1.47
NUP49YGL172W YBR220CP38318 560 aa5.85□□□□□ -1.47
NUP49YGL172W SSH1P38353 490 aaKnown RBP5.85□□□□□ -1.47
NUP49YGL172W YGP1P38616 354 aaKnown RBP5.85□□□□□ -1.47
NUP49YGL172W NRK1P53915 240 aa5.85□□□□□ -1.47
NUP49YGL172W YPL077CQ02831 240 aa5.85□□□□□ -1.47
NUP49YGL172W MSS11Q03825 758 aa5.85□□□□□ -1.47
NUP49YGL172W RSC58Q07979 502 aa5.85□□□□□ -1.47
NUP49YGL172W TDH3P00359 332 aaKnown RBP RIP-Chip data5.84□□□□□ -1.47not detected
NUP49YGL172W ERG24P32462 438 aaKnown RBP5.84□□□□□ -1.47
NUP49YGL172W CLB6P32943 380 aa5.84□□□□□ -1.47
NUP49YGL172W TMA19P35691 167 aaKnown RBP5.84□□□□□ -1.47
NUP49YGL172W PRS3P38689 320 aaKnown RBP5.84□□□□□ -1.47
NUP49YGL172W RTT105P40063 208 aa5.84□□□□□ -1.47
NUP49YGL172W FLX1P40464 311 aa5.84□□□□□ -1.47
NUP49YGL172W ATG18P43601 500 aa5.84□□□□□ -1.47
NUP49YGL172W ERJ5P43613 295 aaPredicted RBP5.84□□□□□ -1.47
NUP49YGL172W CIN2P46670 268 aa5.84□□□□□ -1.47
NUP49YGL172W UBC13P52490 153 aa5.84□□□□□ -1.47
NUP49YGL172W SLI1P53304 468 aa5.84□□□□□ -1.47
NUP49YGL172W SRL4Q03085 281 aa5.84□□□□□ -1.47
NUP49YGL172W PEX30Q06169 523 aa5.84□□□□□ -1.47
NUP49YGL172W PEX27Q08580 376 aa5.84□□□□□ -1.47
NUP49YGL172W ISA2Q12425 185 aa5.84□□□□□ -1.47
NUP49YGL172W DCP1Q12517 231 aaPredicted RBP5.84□□□□□ -1.47
NUP49YGL172W SUS1Q6WNK7 96 aa5.84□□□□□ -1.47
NUP49YGL172W CDC39P25655 2108 aaKnown RBP5.84□□□□□ -1.47
NUP49YGL172W QCR7P00128 127 aa5.83□□□□□ -1.48
NUP49YGL172W HIS3P06633 220 aa5.83□□□□□ -1.48
NUP49YGL172W CLB2P24869 491 aa5.83□□□□□ -1.48
NUP49YGL172W MTR2P34232 184 aaKnown RBP5.83□□□□□ -1.48
NUP49YGL172W ZRT3P34240 503 aa5.83□□□□□ -1.48
NUP49YGL172W RCN1P36054 211 aa5.83□□□□□ -1.48
NUP49YGL172W CCZ1P38273 704 aa5.83□□□□□ -1.48
NUP49YGL172W YNR048WP53740 393 aa5.83□□□□□ -1.48
NUP49YGL172W CIK1Q01649 594 aa5.83□□□□□ -1.48
NUP49YGL172W TDA1Q03533 586 aa5.83□□□□□ -1.48
NUP49YGL172W GPI17Q04080 534 aa5.83□□□□□ -1.48
NUP49YGL172W YDR391CQ04170 232 aa5.83□□□□□ -1.48
NUP49YGL172W HEM25Q07534 307 aa5.83□□□□□ -1.48
NUP49YGL172W FRE3Q08905 711 aa5.83□□□□□ -1.48
NUP49YGL172W ORT1Q12375 292 aa5.83□□□□□ -1.48
NUP49YGL172W RPN13O13563 156 aa5.82□□□□□ -1.48
NUP49YGL172W MATALPHA1P0CY06 175 aa5.82□□□□□ -1.48
NUP49YGL172W HMLALPHA1P0CY07 175 aa5.82□□□□□ -1.48
NUP49YGL172W ARO3P14843 370 aaKnown RBP5.82□□□□□ -1.48
NUP49YGL172W ERS1P17261 260 aa5.82□□□□□ -1.48
NUP49YGL172W CNE1P27825 502 aa5.82□□□□□ -1.48
NUP49YGL172W AFG1P32317 509 aa5.82□□□□□ -1.48
NUP49YGL172W GLC7P32598 312 aaKnown RBP5.82□□□□□ -1.48
NUP49YGL172W MCH2P36032 473 aa5.82□□□□□ -1.48
NUP49YGL172W YIL029CP40538 142 aa5.82□□□□□ -1.48
NUP49YGL172W PHB2P50085 310 aa5.82□□□□□ -1.48
NUP49YGL172W YIP5P53108 310 aa5.82□□□□□ -1.48
NUP49YGL172W MTL1P53214 551 aa5.82□□□□□ -1.48
NUP49YGL172W POP6P53218 158 aa5.82□□□□□ -1.48
NUP49YGL172W CRZ1P53968 678 aa5.82□□□□□ -1.48
NUP49YGL172W ATG41Q12048 136 aa5.82□□□□□ -1.48
NUP49YGL172W MSH5Q12175 901 aa5.82□□□□□ -1.48
NUP49YGL172W RPL30P14120 105 aaKnown RBP5.82□□□□□ -1.48
NUP49YGL172W HOM6P31116 359 aaKnown RBP5.82□□□□□ -1.48
NUP49YGL172W SNC2P33328 115 aa5.82□□□□□ -1.48
NUP49YGL172W NNK1P36003 928 aa5.82□□□□□ -1.48
NUP49YGL172W TCM62P38228 572 aaKnown RBP5.82□□□□□ -1.48
NUP49YGL172W BNA2P47125 453 aa5.82□□□□□ -1.48
NUP49YGL172W YGL159WP53110 370 aa5.82□□□□□ -1.48
NUP49YGL172W RNH201P53942 307 aa5.82□□□□□ -1.48
NUP49YGL172W HHT1P61830 136 aa5.82□□□□□ -1.48
NUP49YGL172W SKO1Q02100 647 aa5.82□□□□□ -1.48
NUP49YGL172W RSM28Q03430 361 aa5.82□□□□□ -1.48
NUP49YGL172W MRPL35Q06678 367 aa5.82□□□□□ -1.48
NUP49YGL172W NGL1Q08213 363 aaKnown RBP5.82□□□□□ -1.48
NUP49YGL172W RRS1Q08746 203 aaKnown RBP5.82□□□□□ -1.48
NUP49YGL172W TGS1Q12052 315 aa5.82□□□□□ -1.48
NUP49YGL172W NCE102Q12207 173 aaRIP-Chip data5.82□□□□□ -1.48not detected
NUP49YGL172W USB1Q12208 290 aaKnown RBP5.82□□□□□ -1.48
NUP49YGL172W UTP20P35194 2493 aaKnown RBP5.81□□□□□ -1.48
NUP49YGL172W DIF1O13577 133 aa5.81□□□□□ -1.48
NUP49YGL172W MSI1P13712 422 aa5.81□□□□□ -1.48
NUP49YGL172W PDA1P16387 420 aaKnown RBP5.81□□□□□ -1.48
NUP49YGL172W PRE4P30657 266 aa5.81□□□□□ -1.48
NUP49YGL172W DEG1P31115 442 aaKnown RBP5.81□□□□□ -1.48
NUP49YGL172W YHK8P38776 514 aa5.81□□□□□ -1.48
NUP49YGL172W ARO9P38840 513 aaPredicted RBP5.81□□□□□ -1.48
NUP49YGL172W MIT1P40002 666 aa5.81□□□□□ -1.48
NUP49YGL172W OST1P41543 476 aaKnown RBP5.81□□□□□ -1.48
NUP49YGL172W SER2P42941 309 aa5.81□□□□□ -1.48
NUP49YGL172W YFL054CP43549 646 aa5.81□□□□□ -1.48
NUP49YGL172W AVT4P50944 713 aa5.81□□□□□ -1.48
NUP49YGL172W CWC23P52868 283 aaPredicted RBP5.81□□□□□ -1.48
NUP49YGL172W RAI1P53063 387 aaKnown RBP5.81□□□□□ -1.48
NUP49YGL172W YGR054WP53235 642 aaKnown RBP5.81□□□□□ -1.48
NUP49YGL172W SCW4P53334 386 aaKnown RBP5.81□□□□□ -1.48
NUP49YGL172W BUD25P85052 153 aa5.81□□□□□ -1.48
NUP49YGL172W LRS4Q04087 347 aaKnown RBP5.81□□□□□ -1.48
NUP49YGL172W YLR283WQ05867 314 aa5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms