RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W PEX22P39718 180 aa1.79□□□□□ -2.12
NIC96YFR002W IBA57P47158 497 aa1.79□□□□□ -2.12
NIC96YFR002W YPT32P51996 222 aaKnown RBP1.79□□□□□ -2.12
NIC96YFR002W PEX31P53203 462 aa1.79□□□□□ -2.12
NIC96YFR002W ZRG17P53735 605 aa1.79□□□□□ -2.12
NIC96YFR002W CDC123Q05791 360 aa1.79□□□□□ -2.12
NIC96YFR002W SFH1Q06168 426 aa1.79□□□□□ -2.12
NIC96YFR002W MRX9Q07349 420 aaKnown RBP1.79□□□□□ -2.12
NIC96YFR002W YOR114WQ12219 294 aa1.79□□□□□ -2.12
NIC96YFR002W YCL042WP25572 119 aa1.78□□□□□ -2.12
NIC96YFR002W YCR102CP25608 368 aa1.78□□□□□ -2.12
NIC96YFR002W ADE1P27616 306 aa1.78□□□□□ -2.12
NIC96YFR002W QRI5P32344 111 aa1.78□□□□□ -2.12
NIC96YFR002W ECM4P36156 370 aa1.78□□□□□ -2.12
NIC96YFR002W YBR096WP38256 230 aa1.78□□□□□ -2.12
NIC96YFR002W RFC4P40339 323 aaKnown RBP1.78□□□□□ -2.12
NIC96YFR002W YIA6P40556 373 aa1.78□□□□□ -2.12
NIC96YFR002W YJR079WP47126 109 aa1.78□□□□□ -2.12
NIC96YFR002W CTF19Q02732 369 aa1.78□□□□□ -2.12
NIC96YFR002W PEX30Q06169 523 aa1.78□□□□□ -2.12
NIC96YFR002W YLR446WQ06204 433 aa1.78□□□□□ -2.12
NIC96YFR002W MIM1Q08176 113 aa1.78□□□□□ -2.12
NIC96YFR002W ATP16Q12165 160 aa1.78□□□□□ -2.12
NIC96YFR002W SME1Q12330 94 aaPredicted RBP1.78□□□□□ -2.12
NIC96YFR002W YCL012CQ8J0M4 134 aa1.78□□□□□ -2.12
NIC96YFR002W NCB2Q92317 146 aa1.78□□□□□ -2.12
NIC96YFR002W YDR157WA0A023PZE8 133 aa1.78□□□□□ -2.12
NIC96YFR002W RPS3P05750 240 aaKnown RBP1.78□□□□□ -2.12
NIC96YFR002W PET494P07390 489 aaPredicted RBP1.78□□□□□ -2.12
NIC96YFR002W CTA1P15202 515 aa1.78□□□□□ -2.12
NIC96YFR002W ERD1P16151 362 aa1.78□□□□□ -2.12
NIC96YFR002W STE18P18852 110 aa1.78□□□□□ -2.12
NIC96YFR002W YMR31P19955 123 aa1.78□□□□□ -2.12
NIC96YFR002W FPR1P20081 114 aaKnown RBP1.78□□□□□ -2.12
NIC96YFR002W RNA15P25299 296 aaPredicted RBP1.78□□□□□ -2.12
NIC96YFR002W PEX3P28795 441 aa1.78□□□□□ -2.12
NIC96YFR002W HOM6P31116 359 aaKnown RBP1.78□□□□□ -2.12
NIC96YFR002W THO1P40040 218 aaKnown RBP1.78□□□□□ -2.12
NIC96YFR002W YNL194CP40169 301 aa1.78□□□□□ -2.12
NIC96YFR002W SER33P40510 469 aa1.78□□□□□ -2.12
NIC96YFR002W DSN1P40568 576 aa1.78□□□□□ -2.12
NIC96YFR002W RPL10P41805 221 aaKnown RBP1.78□□□□□ -2.12
NIC96YFR002W YRB1P41920 201 aaKnown RBP1.78□□□□□ -2.12
NIC96YFR002W MOB2P43563 287 aa1.78□□□□□ -2.12
NIC96YFR002W ASG7P46993 209 aa1.78□□□□□ -2.12
NIC96YFR002W AIM23P47015 356 aa1.78□□□□□ -2.12
NIC96YFR002W YNL095CP53932 642 aa1.78□□□□□ -2.12
NIC96YFR002W SWS2P53937 143 aa1.78□□□□□ -2.12
NIC96YFR002W VAC7P53950 1165 aa1.78□□□□□ -2.12
NIC96YFR002W EBS1Q03466 884 aaKnown RBP1.78□□□□□ -2.12
NIC96YFR002W CTR3Q06686 241 aa1.78□□□□□ -2.12
NIC96YFR002W YOR376WQ08900 122 aa1.78□□□□□ -2.12
NIC96YFR002W BI3Q9ZZW7 517 aa1.78□□□□□ -2.12
NIC96YFR002W RAD50P12753 1312 aa1.77□□□□□ -2.13
NIC96YFR002W HAP2P06774 265 aa1.77□□□□□ -2.13
NIC96YFR002W MATALPHA2P0CY08 210 aa1.77□□□□□ -2.13
NIC96YFR002W HMLALPHA2P0CY09 210 aa1.77□□□□□ -2.13
NIC96YFR002W INO2P26798 304 aa1.77□□□□□ -2.13
NIC96YFR002W KTI12P34253 313 aaKnown RBP1.77□□□□□ -2.13
NIC96YFR002W GPX1P36014 167 aa1.77□□□□□ -2.13
NIC96YFR002W PHO88P38264 188 aaPredicted RBP1.77□□□□□ -2.13
NIC96YFR002W YJR012CP47087 207 aa1.77□□□□□ -2.13
NIC96YFR002W NBP35P52920 328 aa1.77□□□□□ -2.13
NIC96YFR002W RMR1P53060 241 aa1.77□□□□□ -2.13
NIC96YFR002W YDR209CQ03480 137 aa1.77□□□□□ -2.13
NIC96YFR002W YMR166CQ03829 368 aa1.77□□□□□ -2.13
NIC96YFR002W YMR321CQ04898 105 aa1.77□□□□□ -2.13
NIC96YFR002W DPP1Q05521 289 aa1.77□□□□□ -2.13
NIC96YFR002W PRM7Q12459 698 aa1.77□□□□□ -2.13
NIC96YFR002W HTZ1Q12692 134 aaKnown RBP1.77□□□□□ -2.13
NIC96YFR002W YBR121C-AP0C5L4 52 aa1.77□□□□□ -2.13
NIC96YFR002W CMK2P22517 447 aa1.77□□□□□ -2.13
NIC96YFR002W GMC1Q04399 608 aa1.77□□□□□ -2.13
NIC96YFR002W MCH1Q07376 486 aa1.77□□□□□ -2.13
NIC96YFR002W RRP42Q12277 265 aaPredicted RBP1.77□□□□□ -2.13
NIC96YFR002W SFM1Q12314 213 aa1.77□□□□□ -2.13
NIC96YFR002W TPI1P00942 248 aaKnown RBP1.76□□□□□ -2.13
NIC96YFR002W CBF1P17106 351 aa1.76□□□□□ -2.13
NIC96YFR002W MRPL20P22354 195 aaPredicted RBP1.76□□□□□ -2.13
NIC96YFR002W YFL012WP43580 148 aa1.76□□□□□ -2.13
NIC96YFR002W NIF3P53081 288 aa1.76□□□□□ -2.13
NIC96YFR002W NOP19P53317 196 aaPredicted RBP1.76□□□□□ -2.13
NIC96YFR002W YRA1Q12159 226 aaKnown RBP1.76□□□□□ -2.13
NIC96YFR002W LAG2Q92325 660 aa1.76□□□□□ -2.13
NIC96YFR002W UTP20P35194 2493 aaKnown RBP1.76□□□□□ -2.13
NIC96YFR002W GIT1P25346 518 aa1.76□□□□□ -2.13
NIC96YFR002W ATG15P25641 520 aa1.76□□□□□ -2.13
NIC96YFR002W ERG10P41338 398 aaKnown RBP1.76□□□□□ -2.13
NIC96YFR002W PFS2P42841 465 aaKnown RBP1.76□□□□□ -2.13
NIC96YFR002W USE1P53146 245 aa1.76□□□□□ -2.13
NIC96YFR002W ASI3P53983 676 aa1.76□□□□□ -2.13
NIC96YFR002W RPL21AQ02753 160 aaKnown RBP1.76□□□□□ -2.13
NIC96YFR002W YDR222WQ04925 415 aa1.76□□□□□ -2.13
NIC96YFR002W ABP140Q08641 628 aaKnown RBP1.76□□□□□ -2.13
NIC96YFR002W PER33Q12144 273 aa1.76□□□□□ -2.13
NIC96YFR002W RFM1Q12192 310 aa1.76□□□□□ -2.13
NIC96YFR002W YCT1Q12235 531 aa1.76□□□□□ -2.13
NIC96YFR002W YPS3Q12303 508 aa1.76□□□□□ -2.13
NIC96YFR002W RPL21BQ12672 160 aaKnown RBP1.76□□□□□ -2.13
NIC96YFR002W BRR2P32639 2163 aaKnown RBP1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms