RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	RMD8	P43620	662 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	ASN1	P49089	572 aa	Known RBP	4.18	□□□□□ -1.74
TFB3	YDR460W	MIC26	P50087	233 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	YGL114W	P53134	725 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	THG1	P53215	237 aa	Known RBP	4.18	□□□□□ -1.74
TFB3	YDR460W	BOR1	P53838	576 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	AAH1	P53909	347 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	NUP100	Q02629	959 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	YPL067C	Q02754	198 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	STD1	Q02794	444 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	GMC1	Q04399	608 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	SHH3	Q04487	196 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	YMR315W	Q04869	349 aa	Known RBP	4.18	□□□□□ -1.74
TFB3	YDR460W	RNH202	Q05635	350 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	VAM3	Q12241	283 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	HUT1	Q12520	339 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	YPR145C-A	Q2V2P0	78 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	TMA7	Q3E764	64 aa	Known RBP	4.18	□□□□□ -1.74
TFB3	YDR460W	BI3	Q9ZZW7	517 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	PAI3	P01094	68 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	RPL27A	P0C2H6	136 aa	Known RBP	4.17	□□□□□ -1.74
TFB3	YDR460W	RPL27B	P0C2H7	136 aa	Known RBP	4.17	□□□□□ -1.74
TFB3	YDR460W	TY2A-LR1	P0C2J4	438 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	TIR1	P10863	254 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	TY2A-C	P25383	438 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	PUT3	P25502	979 aa	Predicted RBP	4.17	□□□□□ -1.74
TFB3	YDR460W	POP5	P28005	173 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	OAC1	P32332	324 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	RML2	P32611	393 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	TAE1	P38340	232 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	RPP1	P38786	293 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	SFB3	P38810	929 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	YIL161W	P40449	235 aa	Known RBP	4.17	□□□□□ -1.74
TFB3	YDR460W	SSU1	P41930	458 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	PFS2	P42841	465 aa	Known RBP	4.17	□□□□□ -1.74
TFB3	YDR460W	ALK1	P43633	760 aa	Known RBP	4.17	□□□□□ -1.74
TFB3	YDR460W	SCS3	P53012	380 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	SMM1	P53720	384 aa	Known RBP	4.17	□□□□□ -1.74
TFB3	YDR460W	SMX3	P54999	86 aa	Predicted RBP	4.17	□□□□□ -1.74
TFB3	YDR460W	TY2A-DR2	Q03483	438 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	YML079W	Q03629	201 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	YMR166C	Q03829	368 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	ROY1	Q04847	553 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	LOA1	Q06508	300 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	MCH1	Q07376	486 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	YDL057W	Q07379	328 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	NRT1	Q08485	598 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	RAD28	Q12021	506 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	YTM1	Q12024	460 aa	Predicted RBP	4.17	□□□□□ -1.74
TFB3	YDR460W	PER33	Q12144	273 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	TY2A-B	Q12260	438 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	TY2A-OR2	Q12293	438 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	TY2A-DR1	Q12392	438 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	TY2A-OR1	Q12439	438 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	LAS17	Q12446	633 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	YIL134C-A	Q45U18	67 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	TY2A-DR3	Q99303	438 aa		4.17	□□□□□ -1.74
TFB3	YDR460W	MOT1	P32333	1867 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	YER190C-B	P0CX94	160 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	YEL077W-A	P0CX95	160 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	YGR296C-B	P0CX96	160 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	YPL283W-B	P0CX97	160 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	YPR204C-A	P0CX98	160 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	SCH9	P11792	824 aa	Known RBP	4.16	□□□□□ -1.74
TFB3	YDR460W	CDC42	P19073	191 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	YCL068C	P25593	260 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	OCH1	P31755	480 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	TMT1	P32643	299 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	FMT1	P32785	401 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	MSN4	P33749	630 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	ASK1	P35734	292 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	MIX23	P38162	196 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	WSS1	P38838	269 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	HAT2	P39984	401 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	COX15	P40086	486 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	COA1	P40452	197 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	LYS12	P40495	371 aa	Known RBP	4.16	□□□□□ -1.74
TFB3	YDR460W	SPG5	P42933	373 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	GZF3	P42944	551 aa	Known RBP	4.16	□□□□□ -1.74
TFB3	YDR460W	PTR3	P43606	678 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	GPI14	P47088	403 aa	Known RBP	4.16	□□□□□ -1.74
TFB3	YDR460W	YJR111C	P47148	283 aa	Known RBP	4.16	□□□□□ -1.74
TFB3	YDR460W	OST3	P48439	350 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	RIB4	P50861	169 aa	Predicted RBP	4.16	□□□□□ -1.74
TFB3	YDR460W	MTL1	P53214	551 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	YGR126W	P53274	230 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	MEP3	P53390	489 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	ACT1	P60010	375 aa	Known RBP	4.16	□□□□□ -1.74
TFB3	YDR460W	GRX5	Q02784	150 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	NRG1	Q03125	231 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	SNO1	Q03144	224 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	RIM13	Q03792	727 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	HNT1	Q04344	158 aa	Known RBP	4.16	□□□□□ -1.74
TFB3	YDR460W	ADH6	Q04894	360 aa	Known RBP	4.16	□□□□□ -1.74
TFB3	YDR460W	YLR040C	Q07988	224 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	COQ10	Q08058	207 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	AIM39	Q08223	395 aa		4.16	□□□□□ -1.74
TFB3	YDR460W	FSF1	Q12029	327 aa	Known RBP	4.16	□□□□□ -1.74
TFB3	YDR460W	PDH1	Q12428	516 aa	Known RBP	4.16	□□□□□ -1.74
TFB3	YDR460W	EAF3	Q12432	401 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms