RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W AIM25P47140 327 aa2.18□□□□□ -2.06
SNX41YDR425W YJR111CP47148 283 aaKnown RBP2.18□□□□□ -2.06
SNX41YDR425W TIS11P47977 285 aa2.18□□□□□ -2.06
SNX41YDR425W AVT4P50944 713 aa2.18□□□□□ -2.06
SNX41YDR425W SDT1P53078 280 aa2.18□□□□□ -2.06
SNX41YDR425W YNR062CP53748 327 aa2.18□□□□□ -2.06
SNX41YDR425W IGO1P53897 168 aa2.18□□□□□ -2.06
SNX41YDR425W SEN15Q04675 128 aa2.18□□□□□ -2.06
SNX41YDR425W YLR446WQ06204 433 aa2.18□□□□□ -2.06
SNX41YDR425W YLR173WQ06247 608 aa2.18□□□□□ -2.06
SNX41YDR425W YPD1Q07688 167 aa2.18□□□□□ -2.06
SNX41YDR425W YOR387CQ08910 206 aa2.18□□□□□ -2.06
SNX41YDR425W ATG41Q12048 136 aa2.18□□□□□ -2.06
SNX41YDR425W SPC3Q12133 184 aa2.18□□□□□ -2.06
SNX41YDR425W YPL245WQ12179 454 aaKnown RBP2.18□□□□□ -2.06
SNX41YDR425W RPN5Q12250 445 aaKnown RBP2.18□□□□□ -2.06
SNX41YDR425W YLR046CQ12253 270 aa2.18□□□□□ -2.06
SNX41YDR425W SFG1Q12507 346 aa2.18□□□□□ -2.06
SNX41YDR425W AFI1Q99222 893 aa2.18□□□□□ -2.06
SNX41YDR425W HIS1P00498 297 aaKnown RBP2.17□□□□□ -2.06
SNX41YDR425W SCEIP03882 235 aa2.17□□□□□ -2.06
SNX41YDR425W SPS4P09937 338 aa2.17□□□□□ -2.06
SNX41YDR425W NAM2P11325 894 aa2.17□□□□□ -2.06
SNX41YDR425W MET8P15807 274 aa2.17□□□□□ -2.06
SNX41YDR425W SEC22P22214 214 aa2.17□□□□□ -2.06
SNX41YDR425W RRP7P25368 297 aaPredicted RBP2.17□□□□□ -2.06
SNX41YDR425W FAA1P30624 700 aaKnown RBP2.17□□□□□ -2.06
SNX41YDR425W SUA5P32579 426 aa2.17□□□□□ -2.06
SNX41YDR425W GLC7P32598 312 aaKnown RBP2.17□□□□□ -2.06
SNX41YDR425W ECT1P33412 323 aa2.17□□□□□ -2.06
SNX41YDR425W MSN4P33749 630 aa2.17□□□□□ -2.06
SNX41YDR425W MCR1P36060 302 aaKnown RBP2.17□□□□□ -2.06
SNX41YDR425W SRO77P38163 1010 aa2.17□□□□□ -2.06
SNX41YDR425W SHE1P38200 338 aa2.17□□□□□ -2.06
SNX41YDR425W YBR013CP38215 129 aa2.17□□□□□ -2.06
SNX41YDR425W RTC2P38279 296 aa2.17□□□□□ -2.06
SNX41YDR425W RTC3P38804 111 aaPredicted RBP2.17□□□□□ -2.06
SNX41YDR425W PRM9P39551 298 aa2.17□□□□□ -2.06
SNX41YDR425W BMT5P40493 336 aa2.17□□□□□ -2.06
SNX41YDR425W REE1P40893 198 aa2.17□□□□□ -2.06
SNX41YDR425W PFS2P42841 465 aaKnown RBP2.17□□□□□ -2.06
SNX41YDR425W AGX1P43567 385 aa2.17□□□□□ -2.06
SNX41YDR425W PET130P47065 347 aa2.17□□□□□ -2.06
SNX41YDR425W PEX31P53203 462 aa2.17□□□□□ -2.06
SNX41YDR425W SAY1P53324 424 aa2.17□□□□□ -2.06
SNX41YDR425W CDC14Q00684 551 aa2.17□□□□□ -2.06
SNX41YDR425W TPS1Q00764 495 aaKnown RBP2.17□□□□□ -2.06
SNX41YDR425W MET31Q03081 177 aa2.17□□□□□ -2.06
SNX41YDR425W PIR3Q03180 325 aa2.17□□□□□ -2.06
SNX41YDR425W ATG38Q05789 226 aaKnown RBP2.17□□□□□ -2.06
SNX41YDR425W DCR2Q05924 578 aa2.17□□□□□ -2.06
SNX41YDR425W PML1Q07930 204 aaPredicted RBP2.17□□□□□ -2.06
SNX41YDR425W TMS1Q12116 473 aa2.17□□□□□ -2.06
SNX41YDR425W RRG1Q12167 365 aaPredicted RBP2.17□□□□□ -2.06
SNX41YDR425W PSF1Q12488 208 aa2.17□□□□□ -2.06
SNX41YDR425W YLR099W-AQ3E798 87 aa2.17□□□□□ -2.06
SNX41YDR425W YRF1-3P0CX14 1859 aa2.17□□□□□ -2.06
SNX41YDR425W YRF1-7P0CX15 1859 aa2.17□□□□□ -2.06
SNX41YDR425W YRF1-6P53819 1859 aa2.17□□□□□ -2.06
SNX41YDR425W PET9P18239 318 aaKnown RBP2.16□□□□□ -2.06
SNX41YDR425W ZRC1P20107 442 aa2.16□□□□□ -2.06
SNX41YDR425W PRE7P23724 241 aaKnown RBP2.16□□□□□ -2.06
SNX41YDR425W POF1P25576 258 aa2.16□□□□□ -2.06
SNX41YDR425W ARO2P28777 376 aaKnown RBP2.16□□□□□ -2.06
SNX41YDR425W KRE6P32486 720 aa2.16□□□□□ -2.06
SNX41YDR425W VPH1P32563 840 aaKnown RBP2.16□□□□□ -2.06
SNX41YDR425W SEC17P32602 292 aa2.16□□□□□ -2.06
SNX41YDR425W PAD1P33751 242 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
SNX41YDR425W PMT1P33775 817 aa2.16□□□□□ -2.06
SNX41YDR425W SHE2P36068 246 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
SNX41YDR425W DTR1P38125 572 aa2.16□□□□□ -2.06
SNX41YDR425W GCV3P39726 170 aaPredicted RBP2.16□□□□□ -2.06
SNX41YDR425W HMF1P40037 129 aaKnown RBP2.16□□□□□ -2.06
SNX41YDR425W RTT105P40063 208 aa2.16□□□□□ -2.06
SNX41YDR425W POG1P40473 351 aa2.16□□□□□ -2.06
SNX41YDR425W CAT5P41735 233 aa2.16□□□□□ -2.06
SNX41YDR425W VMA21P41806 77 aa2.16□□□□□ -2.06
SNX41YDR425W STE24P47154 453 aa2.16□□□□□ -2.06
SNX41YDR425W IBA57P47158 497 aa2.16□□□□□ -2.06
SNX41YDR425W DAN1P47178 298 aa2.16□□□□□ -2.06
SNX41YDR425W PHB2P50085 310 aa2.16□□□□□ -2.06
SNX41YDR425W HCH1P53834 153 aa2.16□□□□□ -2.06
SNX41YDR425W FMP41P53889 259 aaKnown RBP2.16□□□□□ -2.06
SNX41YDR425W SPP2Q02521 185 aa2.16□□□□□ -2.06
SNX41YDR425W ERO1Q03103 563 aa2.16□□□□□ -2.06
SNX41YDR425W RRP45Q05636 305 aaKnown RBP2.16□□□□□ -2.06
SNX41YDR425W YOR114WQ12219 294 aa2.16□□□□□ -2.06
SNX41YDR425W MRX4Q12467 430 aa2.16□□□□□ -2.06
SNX41YDR425W YPR014CQ6B0W2 109 aa2.16□□□□□ -2.06
SNX41YDR425W CDC28P00546 298 aaKnown RBP2.16□□□□□ -2.06
SNX41YDR425W CAR2P07991 424 aaKnown RBP2.16□□□□□ -2.06
SNX41YDR425W MSF1P08425 469 aa2.16□□□□□ -2.06
SNX41YDR425W YOL163WP0CF20 169 aa2.16□□□□□ -2.06
SNX41YDR425W MRP1P10662 321 aaKnown RBP2.16□□□□□ -2.06
SNX41YDR425W FUN14P18411 198 aa2.16□□□□□ -2.06
SNX41YDR425W YPK2P18961 677 aa2.16□□□□□ -2.06
SNX41YDR425W CDC50P25656 391 aa2.16□□□□□ -2.06
SNX41YDR425W YEL045CP32616 141 aa2.16□□□□□ -2.06
SNX41YDR425W SUI1P32911 108 aaKnown RBP2.16□□□□□ -2.06
SNX41YDR425W YBL059WP34224 193 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 70.9 ms