RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W YJR111CP47148 283 aaKnown RBP1.8□□□□□ -2.12
SIR4YDR227W SKP1P52286 194 aa1.8□□□□□ -2.12
SIR4YDR227W PKP2P53170 491 aa1.8□□□□□ -2.12
SIR4YDR227W CTF19Q02732 369 aa1.8□□□□□ -2.12
SIR4YDR227W MRPL51Q06090 140 aaPredicted RBP1.8□□□□□ -2.12
SIR4YDR227W YML003WP0CF16 290 aa1.8□□□□□ -2.12
SIR4YDR227W TIP20P33891 701 aa1.8□□□□□ -2.12
SIR4YDR227W GOS1P38736 223 aa1.8□□□□□ -2.12
SIR4YDR227W AST2P39945 430 aaKnown RBP1.8□□□□□ -2.12
SIR4YDR227W AVT7P40501 490 aa1.8□□□□□ -2.12
SIR4YDR227W AVT1P47082 602 aa1.8□□□□□ -2.12
SIR4YDR227W SCS3P53012 380 aa1.8□□□□□ -2.12
SIR4YDR227W YPS5P53057 165 aa1.8□□□□□ -2.12
SIR4YDR227W SYF2P53277 215 aaPredicted RBP1.8□□□□□ -2.12
SIR4YDR227W YLR460CP54007 376 aa1.8□□□□□ -2.12
SIR4YDR227W SEI1Q06058 285 aa1.8□□□□□ -2.12
SIR4YDR227W YPR114WQ06107 315 aa1.8□□□□□ -2.12
SIR4YDR227W IZH3Q07959 543 aa1.8□□□□□ -2.12
SIR4YDR227W MLH3Q12083 715 aa1.8□□□□□ -2.12
SIR4YDR227W NTO1Q12311 748 aa1.8□□□□□ -2.12
SIR4YDR227W DSF1P0CX08 502 aa1.79□□□□□ -2.12
SIR4YDR227W YNR073CP0CX09 502 aa1.79□□□□□ -2.12
SIR4YDR227W MRP2P10663 115 aaPredicted RBP1.79□□□□□ -2.12
SIR4YDR227W STP22P25604 385 aa1.79□□□□□ -2.12
SIR4YDR227W RFA3P26755 122 aaKnown RBP1.79□□□□□ -2.12
SIR4YDR227W UBC6P33296 250 aaPredicted RBP1.79□□□□□ -2.12
SIR4YDR227W EGD2P38879 174 aaKnown RBP1.79□□□□□ -2.12
SIR4YDR227W YJL206CP39529 758 aa1.79□□□□□ -2.12
SIR4YDR227W GLE2P40066 365 aa1.79□□□□□ -2.12
SIR4YDR227W RRT5P43607 289 aa1.79□□□□□ -2.12
SIR4YDR227W IRC7P43623 340 aa1.79□□□□□ -2.12
SIR4YDR227W APT1P49435 187 aaKnown RBP1.79□□□□□ -2.12
SIR4YDR227W NQM1P53228 333 aaPredicted RBP1.79□□□□□ -2.12
SIR4YDR227W YGR164WP53291 111 aa1.79□□□□□ -2.12
SIR4YDR227W TIM44Q01852 431 aa1.79□□□□□ -2.12
SIR4YDR227W PRM6Q04705 352 aa1.79□□□□□ -2.12
SIR4YDR227W SGT1Q08446 395 aa1.79□□□□□ -2.12
SIR4YDR227W CSM4Q08955 156 aa1.79□□□□□ -2.12
SIR4YDR227W AGC1Q12482 902 aa1.79□□□□□ -2.12
SIR4YDR227W COS2P0CX12 379 aa1.79□□□□□ -2.12
SIR4YDR227W COS3P0CX13 379 aa1.79□□□□□ -2.12
SIR4YDR227W CNA1P23287 553 aa1.79□□□□□ -2.12
SIR4YDR227W QRI5P32344 111 aa1.79□□□□□ -2.12
SIR4YDR227W MDH3P32419 343 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
SIR4YDR227W KAR9P32526 644 aa1.79□□□□□ -2.12
SIR4YDR227W MLH1P38920 769 aa1.79□□□□□ -2.12
SIR4YDR227W FCY21P40039 528 aa1.79□□□□□ -2.12
SIR4YDR227W POG1P40473 351 aa1.79□□□□□ -2.12
SIR4YDR227W YPS6P40583 537 aa1.79□□□□□ -2.12
SIR4YDR227W CHA4P43634 648 aa1.79□□□□□ -2.12
SIR4YDR227W PUS4P48567 403 aaKnown RBP1.79□□□□□ -2.12
SIR4YDR227W PRP24P49960 444 aaKnown RBP1.79□□□□□ -2.12
SIR4YDR227W YNR066CP53752 436 aa1.79□□□□□ -2.12
SIR4YDR227W ERG5P54781 538 aa1.79□□□□□ -2.12
SIR4YDR227W YPR098CQ06089 161 aa1.79□□□□□ -2.12
SIR4YDR227W DTD1Q07648 150 aaKnown RBP1.79□□□□□ -2.12
SIR4YDR227W AAD15Q08361 143 aa1.79□□□□□ -2.12
SIR4YDR227W DPM1P14020 267 aaKnown RBP1.79□□□□□ -2.12
SIR4YDR227W BUB3P26449 341 aa1.79□□□□□ -2.12
SIR4YDR227W TPS2P31688 896 aaKnown RBP1.79□□□□□ -2.12
SIR4YDR227W PRX1P34227 261 aaKnown RBP1.79□□□□□ -2.12
SIR4YDR227W SPC34P36131 295 aa1.79□□□□□ -2.12
SIR4YDR227W YPC1P38298 316 aa1.79□□□□□ -2.12
SIR4YDR227W YBR285WP38354 144 aa1.79□□□□□ -2.12
SIR4YDR227W ERG10P41338 398 aaKnown RBP1.79□□□□□ -2.12
SIR4YDR227W HHO1P53551 258 aa1.79□□□□□ -2.12
SIR4YDR227W SRL4Q03085 281 aa1.79□□□□□ -2.12
SIR4YDR227W RAV2Q03956 351 aa1.79□□□□□ -2.12
SIR4YDR227W HTZ1Q12692 134 aaKnown RBP1.79□□□□□ -2.12
SIR4YDR227W OAC1P32332 324 aa1.78□□□□□ -2.12
SIR4YDR227W TFC1P32367 649 aa1.78□□□□□ -2.12
SIR4YDR227W CAT2P32796 670 aaKnown RBP1.78□□□□□ -2.12
SIR4YDR227W ECM15P35195 104 aa1.78□□□□□ -2.12
SIR4YDR227W YKR073CP36153 106 aa1.78□□□□□ -2.12
SIR4YDR227W RCK2P38623 610 aa1.78□□□□□ -2.12
SIR4YDR227W PAC2P39937 518 aa1.78□□□□□ -2.12
SIR4YDR227W PCI8P40512 444 aa1.78□□□□□ -2.12
SIR4YDR227W ATG27P46989 271 aa1.78□□□□□ -2.12
SIR4YDR227W CDH1P53197 566 aa1.78□□□□□ -2.12
SIR4YDR227W YLR152CP54072 576 aa1.78□□□□□ -2.12
SIR4YDR227W IZH1Q03419 316 aa1.78□□□□□ -2.12
SIR4YDR227W YLR122CQ12312 125 aa1.78□□□□□ -2.12
SIR4YDR227W CDC28P00546 298 aaKnown RBP1.78□□□□□ -2.12
SIR4YDR227W SIR2P06700 562 aa1.78□□□□□ -2.12
SIR4YDR227W AMD2P22580 549 aa1.78□□□□□ -2.12
SIR4YDR227W YSP3P25036 478 aa1.78□□□□□ -2.12
SIR4YDR227W RPS2P25443 254 aaKnown RBP1.78□□□□□ -2.12
SIR4YDR227W TRR1P29509 319 aaKnown RBP1.78□□□□□ -2.12
SIR4YDR227W AGA1P32323 725 aa1.78□□□□□ -2.12
SIR4YDR227W PTM1P32857 523 aa1.78□□□□□ -2.12
SIR4YDR227W MRPL39P36533 70 aa1.78□□□□□ -2.12
SIR4YDR227W YFR054CP43622 192 aa1.78□□□□□ -2.12
SIR4YDR227W FMP33P46998 180 aa1.78□□□□□ -2.12
SIR4YDR227W NUP57P48837 541 aa1.78□□□□□ -2.12
SIR4YDR227W YGL039WP53183 348 aaKnown RBP1.78□□□□□ -2.12
SIR4YDR227W YGR151CP53287 111 aa1.78□□□□□ -2.12
SIR4YDR227W MAL13P53338 473 aa1.78□□□□□ -2.12
SIR4YDR227W HST4P53688 370 aa1.78□□□□□ -2.12
SIR4YDR227W IST1P53843 298 aaPredicted RBP1.78□□□□□ -2.12
SIR4YDR227W PET191Q02772 108 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 55.4 ms