RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C YGL034CP53186 121 aa2.95□□□□□ -1.94
SHU2YDR078C YDR124WQ04608 324 aa2.95□□□□□ -1.94
SHU2YDR078C SEI1Q06058 285 aa2.95□□□□□ -1.94
SHU2YDR078C SYC1Q08553 188 aaPredicted RBP2.95□□□□□ -1.94
SHU2YDR078C YLR126CQ12288 251 aa2.95□□□□□ -1.94
SHU2YDR078C SMT3Q12306 101 aaKnown RBP2.95□□□□□ -1.94
SHU2YDR078C TIM22Q12328 207 aa2.95□□□□□ -1.94
SHU2YDR078C ISD11Q6Q560 94 aa2.95□□□□□ -1.94
SHU2YDR078C NCB2Q92317 146 aa2.95□□□□□ -1.94
SHU2YDR078C NUP157P40064 1391 aaKnown RBP2.95□□□□□ -1.94
SHU2YDR078C ZWF1P11412 505 aaKnown RBP2.94□□□□□ -1.94
SHU2YDR078C YMR31P19955 123 aa2.94□□□□□ -1.94
SHU2YDR078C AST1P35183 429 aa2.94□□□□□ -1.94
SHU2YDR078C MRPL39P36533 70 aa2.94□□□□□ -1.94
SHU2YDR078C MAL32P38158 584 aa2.94□□□□□ -1.94
SHU2YDR078C URA8P38627 578 aaPredicted RBP2.94□□□□□ -1.94
SHU2YDR078C YJL028WP47062 111 aa2.94□□□□□ -1.94
SHU2YDR078C MAL12P53341 584 aa2.94□□□□□ -1.94
SHU2YDR078C GOT1Q03554 138 aa2.94□□□□□ -1.94
SHU2YDR078C BNA7Q04066 261 aa2.94□□□□□ -1.94
SHU2YDR078C EMI1Q04406 187 aa2.94□□□□□ -1.94
SHU2YDR078C YOL019WQ08157 551 aa2.94□□□□□ -1.94
SHU2YDR078C YOR186WQ08560 144 aa2.94□□□□□ -1.94
SHU2YDR078C IES4Q08561 116 aa2.94□□□□□ -1.94
SHU2YDR078C YPR063CQ12160 140 aa2.94□□□□□ -1.94
SHU2YDR078C YKL183C-AQ3E765 70 aa2.94□□□□□ -1.94
SHU2YDR078C YBL008W-AQ3E821 79 aa2.94□□□□□ -1.94
SHU2YDR078C CDC36P06100 191 aaPredicted RBP2.93□□□□□ -1.94
SHU2YDR078C CDC33P07260 213 aaKnown RBP2.93□□□□□ -1.94
SHU2YDR078C NTF2P33331 125 aaKnown RBP2.93□□□□□ -1.94
SHU2YDR078C ECM13P38195 257 aa2.93□□□□□ -1.94
SHU2YDR078C SIP3P38717 1229 aa2.93□□□□□ -1.94
SHU2YDR078C TEM1P38987 245 aa2.93□□□□□ -1.94
SHU2YDR078C ERG28P40030 148 aa2.93□□□□□ -1.94
SHU2YDR078C PRE6P40303 254 aaKnown RBP2.93□□□□□ -1.94
SHU2YDR078C YIL059CP40520 121 aa2.93□□□□□ -1.94
SHU2YDR078C ECO1P43605 281 aa2.93□□□□□ -1.94
SHU2YDR078C CGR1P53188 120 aa2.93□□□□□ -1.94
SHU2YDR078C ALG9P53868 555 aaKnown RBP2.93□□□□□ -1.94
SHU2YDR078C YPL247CQ12523 523 aa2.93□□□□□ -1.94
SHU2YDR078C JIP3O13555 125 aa2.92□□□□□ -1.94
SHU2YDR078C BCY1P07278 416 aaKnown RBP2.92□□□□□ -1.94
SHU2YDR078C YBR121C-AP0C5L4 52 aa2.92□□□□□ -1.94
SHU2YDR078C STE18P18852 110 aa2.92□□□□□ -1.94
SHU2YDR078C CDC10P25342 322 aaKnown RBP2.92□□□□□ -1.94
SHU2YDR078C SFC1P33303 322 aa2.92□□□□□ -1.94
SHU2YDR078C GDH2P33327 1092 aaKnown RBP2.92□□□□□ -1.94
SHU2YDR078C PRP18P33411 251 aaPredicted RBP2.92□□□□□ -1.94
SHU2YDR078C MIC26P50087 233 aa2.92□□□□□ -1.94
SHU2YDR078C YNL046WP53956 172 aa2.92□□□□□ -1.94
SHU2YDR078C YPR011CQ12251 326 aa2.92□□□□□ -1.94
SHU2YDR078C YDL012CQ12489 107 aa2.92□□□□□ -1.94
SHU2YDR078C SPT3P06844 337 aa2.91□□□□□ -1.94
SHU2YDR078C SNA3P14359 133 aa2.91□□□□□ -1.94
SHU2YDR078C PPH21P23594 369 aa2.91□□□□□ -1.94
SHU2YDR078C SSO1P32867 290 aa2.91□□□□□ -1.94
SHU2YDR078C TKL2P33315 681 aa2.91□□□□□ -1.94
SHU2YDR078C CBT1P36038 271 aaPredicted RBP2.91□□□□□ -1.94
SHU2YDR078C PRY2P36110 329 aa2.91□□□□□ -1.94
SHU2YDR078C SSH1P38353 490 aaKnown RBP2.91□□□□□ -1.94
SHU2YDR078C ECM14P38836 430 aa2.91□□□□□ -1.94
SHU2YDR078C MCM22P47167 239 aa2.91□□□□□ -1.94
SHU2YDR078C YJR149WP47177 404 aa2.91□□□□□ -1.94
SHU2YDR078C RAD17P48581 401 aa2.91□□□□□ -1.94
SHU2YDR078C MIG2P53035 382 aa2.91□□□□□ -1.94
SHU2YDR078C NSA1P53136 463 aaPredicted RBP2.91□□□□□ -1.94
SHU2YDR078C YMR114CQ04471 368 aaKnown RBP2.91□□□□□ -1.94
SHU2YDR078C CDC123Q05791 360 aa2.91□□□□□ -1.94
SHU2YDR078C ERD2P18414 219 aa2.9□□□□□ -1.95
SHU2YDR078C TOM40P23644 387 aaKnown RBP2.9□□□□□ -1.95
SHU2YDR078C YNL194CP40169 301 aa2.9□□□□□ -1.95
SHU2YDR078C YMR144WP40214 342 aaKnown RBP2.9□□□□□ -1.95
SHU2YDR078C BUD13P46947 266 aaPredicted RBP2.9□□□□□ -1.95
SHU2YDR078C TRM9P49957 279 aa2.9□□□□□ -1.95
SHU2YDR078C MRPS17Q03246 237 aaPredicted RBP2.9□□□□□ -1.95
SHU2YDR078C FCF1Q05498 189 aaPredicted RBP2.9□□□□□ -1.95
SHU2YDR078C SLD7Q08457 257 aa2.9□□□□□ -1.95
SHU2YDR078C EMP46Q12396 444 aa2.9□□□□□ -1.95
SHU2YDR078C SWI1P09547 1314 aa2.9□□□□□ -1.95
SHU2YDR078C RPS23AP0CX29 145 aaKnown RBP2.89□□□□□ -1.95
SHU2YDR078C RPS23BP0CX30 145 aa2.89□□□□□ -1.95
SHU2YDR078C AGA2P32781 87 aa2.89□□□□□ -1.95
SHU2YDR078C CWC23P52868 283 aaPredicted RBP2.89□□□□□ -1.95
SHU2YDR078C MDM34P53083 459 aa2.89□□□□□ -1.95
SHU2YDR078C PST1Q12355 444 aa2.89□□□□□ -1.95
SHU2YDR078C DCN1Q12395 269 aa2.89□□□□□ -1.95
SHU2YDR078C MRX4Q12467 430 aa2.89□□□□□ -1.95
SHU2YDR078C NOT5Q12514 560 aaPredicted RBP2.89□□□□□ -1.95
SHU2YDR078C YPL229WQ99395 206 aa2.89□□□□□ -1.95
SHU2YDR078C RNP1P32385 249 aa2.88□□□□□ -1.95
SHU2YDR078C PRX1P34227 261 aaKnown RBP2.88□□□□□ -1.95
SHU2YDR078C YER189WP40104 122 aa2.88□□□□□ -1.95
SHU2YDR078C MGA1P53050 456 aa2.88□□□□□ -1.95
SHU2YDR078C TOS8P53147 276 aa2.88□□□□□ -1.95
SHU2YDR078C SSQ1Q05931 657 aaPredicted RBP2.88□□□□□ -1.95
SHU2YDR078C TPO4Q12256 659 aa2.88□□□□□ -1.95
SHU2YDR078C SIR4P11978 1358 aa2.87□□□□□ -1.95
SHU2YDR078C HIS3P06633 220 aa2.87□□□□□ -1.95
SHU2YDR078C SEC22P22214 214 aa2.87□□□□□ -1.95
SHU2YDR078C FMT1P32785 401 aa2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 78.9 ms