RNA–Protein interactions for RNA: YDL172C

YDL172C, Transcript of Dubious open reading frame, yeast

Gene YDL172C, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL172C	YDL172C	RTC2	P38279	296 aa		4.6	□□□□□ -1.67
YDL172C	YDL172C	FZO1	P38297	855 aa		4.6	□□□□□ -1.67
YDL172C	YDL172C	YER079W	P40052	210 aa	Known RBP	4.6	□□□□□ -1.67
YDL172C	YDL172C	TIR3	P40552	269 aa		4.6	□□□□□ -1.67
YDL172C	YDL172C	MRH4	P53166	561 aa		4.6	□□□□□ -1.67
YDL172C	YDL172C	RSM27	P53305	110 aa		4.6	□□□□□ -1.67
YDL172C	YDL172C	SAM50	P53969	484 aa		4.6	□□□□□ -1.67
YDL172C	YDL172C	PEX12	Q04370	399 aa		4.6	□□□□□ -1.67
YDL172C	YDL172C	ECM18	Q04623	453 aa		4.6	□□□□□ -1.67
YDL172C	YDL172C	SFH1	Q06168	426 aa		4.6	□□□□□ -1.67
YDL172C	YDL172C	ISA2	Q12425	185 aa		4.6	□□□□□ -1.67
YDL172C	YDL172C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
YDL172C	YDL172C	RIB3	Q99258	208 aa		4.6	□□□□□ -1.67
YDL172C	YDL172C	OLE1	P21147	510 aa	Known RBP	4.59	□□□□□ -1.67
YDL172C	YDL172C	HXT2	P23585	541 aa		4.59	□□□□□ -1.67
YDL172C	YDL172C	RRP7	P25368	297 aa	Predicted RBP	4.59	□□□□□ -1.67
YDL172C	YDL172C	HIS6	P40545	261 aa		4.59	□□□□□ -1.67
YDL172C	YDL172C	PMT5	P52867	743 aa		4.59	□□□□□ -1.67
YDL172C	YDL172C	NQM1	P53228	333 aa	Predicted RBP	4.59	□□□□□ -1.67
YDL172C	YDL172C	MRX8	Q05473	314 aa		4.59	□□□□□ -1.67
YDL172C	YDL172C	LIP2	Q06005	328 aa		4.59	□□□□□ -1.67
YDL172C	YDL172C	MLC2	Q06580	163 aa		4.59	□□□□□ -1.67
YDL172C	YDL172C	AIM6	Q07716	390 aa		4.59	□□□□□ -1.67
YDL172C	YDL172C	NFI1	Q12216	726 aa		4.59	□□□□□ -1.67
YDL172C	YDL172C	MSS18	P08593	268 aa		4.58	□□□□□ -1.68
YDL172C	YDL172C	SPS4	P09937	338 aa		4.58	□□□□□ -1.68
YDL172C	YDL172C	INO2	P26798	304 aa		4.58	□□□□□ -1.68
YDL172C	YDL172C	NTG1	P31378	399 aa		4.58	□□□□□ -1.68
YDL172C	YDL172C	FRM2	P37261	193 aa		4.58	□□□□□ -1.68
YDL172C	YDL172C	NAT2	P37293	288 aa		4.58	□□□□□ -1.68
YDL172C	YDL172C	SDH4	P37298	181 aa		4.58	□□□□□ -1.68
YDL172C	YDL172C	CHL4	P38907	458 aa		4.58	□□□□□ -1.68
YDL172C	YDL172C	CCC1	P47818	322 aa		4.58	□□□□□ -1.68
YDL172C	YDL172C	GPI1	P53306	609 aa		4.58	□□□□□ -1.68
YDL172C	YDL172C	NRK1	P53915	240 aa		4.58	□□□□□ -1.68
YDL172C	YDL172C	YKR005C	Q02203	525 aa		4.58	□□□□□ -1.68
YDL172C	YDL172C	ABZ2	Q03266	374 aa		4.58	□□□□□ -1.68
YDL172C	YDL172C	SCW10	Q04951	389 aa		4.58	□□□□□ -1.68
YDL172C	YDL172C	GRC3	Q07845	632 aa		4.58	□□□□□ -1.68
YDL172C	YDL172C	FRE3	Q08905	711 aa		4.58	□□□□□ -1.68
YDL172C	YDL172C	TGS1	Q12052	315 aa		4.58	□□□□□ -1.68
YDL172C	YDL172C	TPK3	P05986	398 aa		4.57	□□□□□ -1.68
YDL172C	YDL172C	TFC1	P32367	649 aa		4.57	□□□□□ -1.68
YDL172C	YDL172C	CBT1	P36038	271 aa	Predicted RBP	4.57	□□□□□ -1.68
YDL172C	YDL172C	YPK3	P38070	525 aa		4.57	□□□□□ -1.68
YDL172C	YDL172C	RFC3	P38629	340 aa		4.57	□□□□□ -1.68
YDL172C	YDL172C	GET2	P40056	285 aa		4.57	□□□□□ -1.68
YDL172C	YDL172C	BUL1	P48524	976 aa		4.57	□□□□□ -1.68
YDL172C	YDL172C	OKP1	P53298	406 aa		4.57	□□□□□ -1.68
YDL172C	YDL172C	DSL1	P53847	754 aa		4.57	□□□□□ -1.68
YDL172C	YDL172C	SWA2	Q06677	668 aa		4.57	□□□□□ -1.68
YDL172C	YDL172C	YOR289W	Q12012	251 aa	Predicted RBP	4.57	□□□□□ -1.68
YDL172C	YDL172C	MDM10	P18409	493 aa		4.56	□□□□□ -1.68
YDL172C	YDL172C	CLB4	P24871	460 aa		4.56	□□□□□ -1.68
YDL172C	YDL172C	MTH1	P35198	433 aa		4.56	□□□□□ -1.68
YDL172C	YDL172C	PRS4	P38063	326 aa	Predicted RBP	4.56	□□□□□ -1.68
YDL172C	YDL172C	IPT1	P38954	527 aa		4.56	□□□□□ -1.68
YDL172C	YDL172C	VPS55	P47111	140 aa		4.56	□□□□□ -1.68
YDL172C	YDL172C	YJR056C	P47115	236 aa		4.56	□□□□□ -1.68
YDL172C	YDL172C	TIM44	Q01852	431 aa		4.56	□□□□□ -1.68
YDL172C	YDL172C	MSC3	Q05812	728 aa		4.56	□□□□□ -1.68
YDL172C	YDL172C	HOR7	Q05827	59 aa		4.56	□□□□□ -1.68
YDL172C	YDL172C	FCY1	Q12178	158 aa		4.56	□□□□□ -1.68
YDL172C	YDL172C	BBP1	Q12365	385 aa		4.56	□□□□□ -1.68
YDL172C	YDL172C	TDH1	P00360	332 aa	Known RBP	4.55	□□□□□ -1.68
YDL172C	YDL172C	COX2	P00410	251 aa		4.55	□□□□□ -1.68
YDL172C	YDL172C	PHO80	P20052	293 aa		4.55	□□□□□ -1.68
YDL172C	YDL172C	SWD2	P36104	329 aa	Predicted RBP	4.55	□□□□□ -1.68
YDL172C	YDL172C	NOP16	P40007	231 aa	Known RBP	4.55	□□□□□ -1.68
YDL172C	YDL172C	USE1	P53146	245 aa		4.55	□□□□□ -1.68
YDL172C	YDL172C	CAB4	P53332	305 aa		4.55	□□□□□ -1.68
YDL172C	YDL172C	AAH1	P53909	347 aa		4.55	□□□□□ -1.68
YDL172C	YDL172C	ACT1	P60010	375 aa	Known RBP	4.55	□□□□□ -1.68
YDL172C	YDL172C	YMR087W	Q04299	284 aa		4.55	□□□□□ -1.68
YDL172C	YDL172C	GAL83	Q04739	417 aa		4.55	□□□□□ -1.68
YDL172C	YDL172C	ATG26	Q06321	1198 aa		4.55	□□□□□ -1.68
YDL172C	YDL172C	YDL086W	Q07505	273 aa		4.55	□□□□□ -1.68
YDL172C	YDL172C	PRM3	Q08931	133 aa		4.55	□□□□□ -1.68
YDL172C	YDL172C	RFM1	Q12192	310 aa		4.55	□□□□□ -1.68
YDL172C	YDL172C	VCX1	Q99385	411 aa		4.55	□□□□□ -1.68
YDL172C	YDL172C	ADE8	P04161	214 aa		4.54	□□□□□ -1.68
YDL172C	YDL172C	YCP4	P25349	247 aa	Known RBP	4.54	□□□□□ -1.68
YDL172C	YDL172C	DOA4	P32571	926 aa		4.54	□□□□□ -1.68
YDL172C	YDL172C	YKL075C	P36083	450 aa		4.54	□□□□□ -1.68
YDL172C	YDL172C	SKG1	P36169	355 aa		4.54	□□□□□ -1.68
YDL172C	YDL172C	TRM5	P38793	499 aa		4.54	□□□□□ -1.68
YDL172C	YDL172C	URM1	P40554	99 aa	Predicted RBP	4.54	□□□□□ -1.68
YDL172C	YDL172C	TTI2	P47168	421 aa		4.54	□□□□□ -1.68
YDL172C	YDL172C	HMS2	P47175	358 aa		4.54	□□□□□ -1.68
YDL172C	YDL172C	PGA1	P53896	198 aa		4.54	□□□□□ -1.68
YDL172C	YDL172C	SPR6	Q01684	191 aa		4.54	□□□□□ -1.68
YDL172C	YDL172C	RPL21A	Q02753	160 aa	Known RBP	4.54	□□□□□ -1.68
YDL172C	YDL172C	GRH1	Q04410	372 aa	Known RBP	4.54	□□□□□ -1.68
YDL172C	YDL172C	ELP6	Q04868	273 aa		4.54	□□□□□ -1.68
YDL172C	YDL172C	RPL21B	Q12672	160 aa	Known RBP	4.54	□□□□□ -1.68
YDL172C	YDL172C	RPL25	P04456	142 aa	Known RBP	4.53	□□□□□ -1.68
YDL172C	YDL172C	SNF4	P12904	322 aa		4.53	□□□□□ -1.68
YDL172C	YDL172C	FUN19	P28003	413 aa	Predicted RBP	4.53	□□□□□ -1.68
YDL172C	YDL172C	UTR5	P32630	166 aa		4.53	□□□□□ -1.68
YDL172C	YDL172C	DUT1	P33317	147 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 73.8 ms