RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W SLD7Q08457 257 aa2.25□□□□□ -2.05
UBC9YDL064W TY3A-GQ12173 290 aa2.25□□□□□ -2.05
UBC9YDL064W TY3A-IQ99219 290 aa2.25□□□□□ -2.05
UBC9YDL064W RNA15P25299 296 aaPredicted RBP2.24□□□□□ -2.05
UBC9YDL064W RGM1Q00453 211 aa2.24□□□□□ -2.05
UBC9YDL064W ATG17Q06410 417 aa2.24□□□□□ -2.05
UBC9YDL064W VPS68Q12016 184 aa2.24□□□□□ -2.05
UBC9YDL064W YKR104WP0CE69 306 aa2.23□□□□□ -2.05
UBC9YDL064W JHD2P47156 728 aaPredicted RBP2.23□□□□□ -2.05
UBC9YDL064W DSK2P48510 373 aa2.23□□□□□ -2.05
UBC9YDL064W USE1P53146 245 aa2.23□□□□□ -2.05
UBC9YDL064W MYO5Q04439 1219 aaKnown RBP2.23□□□□□ -2.05
UBC9YDL064W YPR098CQ06089 161 aa2.23□□□□□ -2.05
UBC9YDL064W SUE1Q06524 206 aa2.23□□□□□ -2.05
UBC9YDL064W CDD1Q06549 142 aa2.23□□□□□ -2.05
UBC9YDL064W RPL26AP05743 127 aaKnown RBP2.22□□□□□ -2.05
UBC9YDL064W SGA1P08019 549 aa2.22□□□□□ -2.05
UBC9YDL064W SGE1P33335 543 aa2.22□□□□□ -2.05
UBC9YDL064W SPT8P38915 602 aa2.22□□□□□ -2.05
UBC9YDL064W RPL26BP53221 127 aaKnown RBP2.22□□□□□ -2.05
UBC9YDL064W SLM2P53955 656 aa2.22□□□□□ -2.05
UBC9YDL064W SPG4Q04438 115 aa2.22□□□□□ -2.05
UBC9YDL064W PAM18Q07914 168 aa2.22□□□□□ -2.05
UBC9YDL064W RRS1Q08746 203 aaKnown RBP2.22□□□□□ -2.05
UBC9YDL064W YCT1Q12235 531 aa2.22□□□□□ -2.05
UBC9YDL064W EMP46Q12396 444 aa2.22□□□□□ -2.05
UBC9YDL064W SEC22P22214 214 aa2.21□□□□□ -2.06
UBC9YDL064W RCN1P36054 211 aa2.21□□□□□ -2.06
UBC9YDL064W BFR1P38934 470 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
UBC9YDL064W THO1P40040 218 aaKnown RBP2.21□□□□□ -2.06
UBC9YDL064W HOC1P47124 396 aa2.21□□□□□ -2.06
UBC9YDL064W MRH4P53166 561 aa2.21□□□□□ -2.06
UBC9YDL064W CSM4Q08955 156 aa2.21□□□□□ -2.06
UBC9YDL064W SNF6P18888 332 aa2.2□□□□□ -2.06
UBC9YDL064W MSA2P36157 363 aa2.2□□□□□ -2.06
UBC9YDL064W LDB7P38210 180 aa2.2□□□□□ -2.06
UBC9YDL064W SSH1P38353 490 aaKnown RBP2.2□□□□□ -2.06
UBC9YDL064W COG3P40094 801 aa2.2□□□□□ -2.06
UBC9YDL064W YJL016WP47072 561 aa2.2□□□□□ -2.06
UBC9YDL064W YJR079WP47126 109 aa2.2□□□□□ -2.06
UBC9YDL064W YDR124WQ04608 324 aa2.2□□□□□ -2.06
UBC9YDL064W RRP40Q08285 240 aaKnown RBP2.2□□□□□ -2.06
UBC9YDL064W YOR186WQ08560 144 aa2.2□□□□□ -2.06
UBC9YDL064W CFT1Q06632 1357 aaKnown RBP2.2□□□□□ -2.06
UBC9YDL064W CLB6P32943 380 aa2.19□□□□□ -2.06
UBC9YDL064W DRE2P36152 348 aa2.19□□□□□ -2.06
UBC9YDL064W YER189WP40104 122 aa2.19□□□□□ -2.06
UBC9YDL064W YNL046WP53956 172 aa2.19□□□□□ -2.06
UBC9YDL064W RHO3Q00245 231 aaKnown RBP2.19□□□□□ -2.06
UBC9YDL064W PET117Q02771 107 aa2.19□□□□□ -2.06
UBC9YDL064W SRL4Q03085 281 aa2.19□□□□□ -2.06
UBC9YDL064W GOT1Q03554 138 aa2.19□□□□□ -2.06
UBC9YDL064W SPO77Q06134 477 aa2.19□□□□□ -2.06
UBC9YDL064W MED4Q12343 284 aa2.19□□□□□ -2.06
UBC9YDL064W BBP1Q12365 385 aa2.19□□□□□ -2.06
UBC9YDL064W YPL229WQ99395 206 aa2.19□□□□□ -2.06
UBC9YDL064W MRPL39P36533 70 aa2.18□□□□□ -2.06
UBC9YDL064W YGP1P38616 354 aaKnown RBP2.18□□□□□ -2.06
UBC9YDL064W YHR127WP38833 243 aaKnown RBP2.18□□□□□ -2.06
UBC9YDL064W YHB1P39676 399 aaKnown RBP2.18□□□□□ -2.06
UBC9YDL064W TIF34P40217 347 aaKnown RBP2.18□□□□□ -2.06
UBC9YDL064W FMC1P40491 155 aa2.18□□□□□ -2.06
UBC9YDL064W OST2P46964 130 aa2.18□□□□□ -2.06
UBC9YDL064W PEX12Q04370 399 aa2.18□□□□□ -2.06
UBC9YDL064W MSA1Q08471 629 aa2.18□□□□□ -2.06
UBC9YDL064W SYC1Q08553 188 aaPredicted RBP2.18□□□□□ -2.06
UBC9YDL064W SNU23Q12368 194 aaPredicted RBP2.18□□□□□ -2.06
UBC9YDL064W SAS5Q99314 248 aa2.18□□□□□ -2.06
UBC9YDL064W MATALPHA1P0CY06 175 aa2.17□□□□□ -2.06
UBC9YDL064W HMLALPHA1P0CY07 175 aa2.17□□□□□ -2.06
UBC9YDL064W RPS5P26783 225 aaKnown RBP2.17□□□□□ -2.06
UBC9YDL064W FZO1P38297 855 aa2.17□□□□□ -2.06
UBC9YDL064W MRPL50P53724 139 aa2.17□□□□□ -2.06
UBC9YDL064W YLR030WQ07967 263 aa2.17□□□□□ -2.06
UBC9YDL064W YLR462WO13556 202 aa2.16□□□□□ -2.06
UBC9YDL064W YHR032W-AP0C5N6 59 aa2.16□□□□□ -2.06
UBC9YDL064W YCR016WP25617 290 aaKnown RBP2.16□□□□□ -2.06
UBC9YDL064W YKL075CP36083 450 aa2.16□□□□□ -2.06
UBC9YDL064W YEL075CP39972 122 aa2.16□□□□□ -2.06
UBC9YDL064W SMD3P43321 101 aaKnown RBP2.16□□□□□ -2.06
UBC9YDL064W YGL159WP53110 370 aa2.16□□□□□ -2.06
UBC9YDL064W COS6P53344 381 aa2.16□□□□□ -2.06
UBC9YDL064W YLR126CQ12288 251 aa2.16□□□□□ -2.06
UBC9YDL064W YHR139C-AO13536 103 aa2.15□□□□□ -2.07
UBC9YDL064W RPO26P20435 155 aa2.15□□□□□ -2.07
UBC9YDL064W SCO1P23833 295 aa2.15□□□□□ -2.07
UBC9YDL064W YCR102CP25608 368 aa2.15□□□□□ -2.07
UBC9YDL064W DAN1P47178 298 aa2.15□□□□□ -2.07
UBC9YDL064W SEI1Q06058 285 aa2.15□□□□□ -2.07
UBC9YDL064W ERG24P32462 438 aaKnown RBP2.14□□□□□ -2.07
UBC9YDL064W MSN4P33749 630 aa2.14□□□□□ -2.07
UBC9YDL064W COS8P38723 381 aa2.14□□□□□ -2.07
UBC9YDL064W MRPL49P40858 161 aaPredicted RBP2.14□□□□□ -2.07
UBC9YDL064W KRE28Q04431 385 aa2.14□□□□□ -2.07
UBC9YDL064W YPR172WQ06608 200 aa2.14□□□□□ -2.07
UBC9YDL064W ERD2P18414 219 aa2.13□□□□□ -2.07
UBC9YDL064W YHL026CP38740 315 aa2.13□□□□□ -2.07
UBC9YDL064W YHR125WP38831 101 aa2.13□□□□□ -2.07
UBC9YDL064W CTR2P38865 189 aa2.13□□□□□ -2.07
UBC9YDL064W MNN5P46982 586 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms