RNA–Protein interactions for RNA: YBR161W

CSH1, Transcript of Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit, yeastyeast

Gene CSH1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSH1YBR161W RIB7P33312 244 aa2.37□□□□□ -2.03
CSH1YBR161W ECM13P38195 257 aa2.37□□□□□ -2.03
CSH1YBR161W ALG11P53954 548 aaKnown RBP2.37□□□□□ -2.03
CSH1YBR161W YPR011CQ12251 326 aa2.37□□□□□ -2.03
CSH1YBR161W YBL008W-AQ3E821 79 aa2.37□□□□□ -2.03
CSH1YBR161W POX1P13711 748 aa2.36□□□□□ -2.03
CSH1YBR161W RPL10P41805 221 aaKnown RBP2.36□□□□□ -2.03
CSH1YBR161W CAB4P53332 305 aa2.36□□□□□ -2.03
CSH1YBR161W YOR283WQ12040 230 aaKnown RBP2.36□□□□□ -2.03
CSH1YBR161W POL1P13382 1468 aa2.36□□□□□ -2.03
CSH1YBR161W CDC25P04821 1589 aa2.36□□□□□ -2.03
CSH1YBR161W SMC4Q12267 1418 aa2.35□□□□□ -2.03
CSH1YBR161W SCO1P23833 295 aa2.35□□□□□ -2.03
CSH1YBR161W QRI5P32344 111 aa2.35□□□□□ -2.03
CSH1YBR161W PRS2P38620 318 aaKnown RBP2.35□□□□□ -2.03
CSH1YBR161W YHL026CP38740 315 aa2.35□□□□□ -2.03
CSH1YBR161W YDR209CQ03480 137 aa2.35□□□□□ -2.03
CSH1YBR161W CGI121Q03705 181 aaKnown RBP2.35□□□□□ -2.03
CSH1YBR161W TRM732Q03496 1420 aa2.34□□□□□ -2.03
CSH1YBR161W MMS22Q06164 1454 aa2.34□□□□□ -2.03
CSH1YBR161W DAL82P21705 255 aa2.34□□□□□ -2.03
CSH1YBR161W VPS3P23643 1011 aa2.34□□□□□ -2.03
CSH1YBR161W SSH1P38353 490 aaKnown RBP2.34□□□□□ -2.03
CSH1YBR161W TIF34P40217 347 aaKnown RBP2.34□□□□□ -2.03
CSH1YBR161W MEP1P40260 492 aa2.34□□□□□ -2.03
CSH1YBR161W MRPL49P40858 161 aaPredicted RBP2.34□□□□□ -2.03
CSH1YBR161W PEX12Q04370 399 aa2.34□□□□□ -2.03
CSH1YBR161W ATG17Q06410 417 aa2.34□□□□□ -2.03
CSH1YBR161W YPR147CQ06522 304 aaKnown RBP2.34□□□□□ -2.03
CSH1YBR161W DNF1P32660 1571 aa2.34□□□□□ -2.03
CSH1YBR161W GEA2P39993 1459 aaKnown RBP2.33□□□□□ -2.04
CSH1YBR161W YOR1P53049 1477 aa2.33□□□□□ -2.04
CSH1YBR161W RKR1Q04781 1562 aa2.33□□□□□ -2.04
CSH1YBR161W POL30P15873 258 aaKnown RBP2.33□□□□□ -2.04
CSH1YBR161W SEC22P22214 214 aa2.33□□□□□ -2.04
CSH1YBR161W YAR1P46683 200 aa2.33□□□□□ -2.04
CSH1YBR161W COS6P53344 381 aa2.33□□□□□ -2.04
CSH1YBR161W BTS1Q12051 335 aa2.33□□□□□ -2.04
CSH1YBR161W SAS5Q99314 248 aa2.33□□□□□ -2.04
CSH1YBR161W SPP41P38904 1435 aa2.33□□□□□ -2.04
CSH1YBR161W DAN1P47178 298 aa2.32□□□□□ -2.04
CSH1YBR161W ASI3P53983 676 aa2.32□□□□□ -2.04
CSH1YBR161W YDR124WQ04608 324 aa2.32□□□□□ -2.04
CSH1YBR161W YLR179CQ06252 201 aaKnown RBP2.32□□□□□ -2.04
CSH1YBR161W SNF8Q12483 233 aa2.32□□□□□ -2.04
CSH1YBR161W TSC11P40061 1430 aa2.32□□□□□ -2.04
CSH1YBR161W KAP95Q06142 861 aaKnown RBP2.31□□□□□ -2.04
CSH1YBR161W BBP1Q12365 385 aa2.31□□□□□ -2.04
CSH1YBR161W EMC6Q12431 108 aa2.31□□□□□ -2.04
CSH1YBR161W RRP36Q12481 300 aaPredicted RBP2.31□□□□□ -2.04
CSH1YBR161W MYO4P32492 1471 aa2.31□□□□□ -2.04
CSH1YBR161W NUP159P40477 1460 aa2.31□□□□□ -2.04
CSH1YBR161W STU1P38198 1513 aa2.31□□□□□ -2.04
CSH1YBR161W SGA1P08019 549 aa2.3□□□□□ -2.04
CSH1YBR161W YKR104WP0CE69 306 aa2.3□□□□□ -2.04
CSH1YBR161W JEN1P36035 616 aa2.3□□□□□ -2.04
CSH1YBR161W SMB1P40018 196 aaKnown RBP2.3□□□□□ -2.04
CSH1YBR161W YGL034CP53186 121 aa2.3□□□□□ -2.04
CSH1YBR161W RSM10Q03201 203 aa2.3□□□□□ -2.04
CSH1YBR161W GOT1Q03554 138 aa2.3□□□□□ -2.04
CSH1YBR161W RRP40Q08285 240 aaKnown RBP2.3□□□□□ -2.04
CSH1YBR161W YOL107WQ12239 342 aa2.3□□□□□ -2.04
CSH1YBR161W SWI1P09547 1314 aa2.3□□□□□ -2.04
CSH1YBR161W DRS2P39524 1355 aa2.3□□□□□ -2.04
CSH1YBR161W VPS15P22219 1454 aa2.29□□□□□ -2.04
CSH1YBR161W SNT2P53127 1403 aa2.29□□□□□ -2.04
CSH1YBR161W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
CSH1YBR161W RCN1P36054 211 aa2.29□□□□□ -2.04
CSH1YBR161W PRS4P38063 326 aaPredicted RBP2.29□□□□□ -2.04
CSH1YBR161W BIG1P38813 335 aa2.29□□□□□ -2.04
CSH1YBR161W OST2P46964 130 aa2.29□□□□□ -2.04
CSH1YBR161W YPR098CQ06089 161 aa2.29□□□□□ -2.04
CSH1YBR161W RPA190P10964 1664 aaKnown RBP2.28□□□□□ -2.04
CSH1YBR161W VTH1P40438 1549 aa2.28□□□□□ -2.04
CSH1YBR161W VTH2P40890 1549 aa2.28□□□□□ -2.04
CSH1YBR161W RSR1P13856 272 aa2.28□□□□□ -2.04
CSH1YBR161W RNA15P25299 296 aaPredicted RBP2.28□□□□□ -2.04
CSH1YBR161W HOM6P31116 359 aaKnown RBP2.28□□□□□ -2.04
CSH1YBR161W SGE1P33335 543 aa2.28□□□□□ -2.04
CSH1YBR161W NRG2P38082 220 aa2.28□□□□□ -2.04
CSH1YBR161W GRE3P38715 327 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
CSH1YBR161W SNZ3P43545 298 aa2.28□□□□□ -2.04
CSH1YBR161W SNX4P47057 423 aa2.28□□□□□ -2.04
CSH1YBR161W USE1P53146 245 aa2.28□□□□□ -2.04
CSH1YBR161W MRH4P53166 561 aa2.28□□□□□ -2.04
CSH1YBR161W EMP46Q12396 444 aa2.28□□□□□ -2.04
CSH1YBR161W ESC1Q03661 1658 aaKnown RBP2.28□□□□□ -2.05
CSH1YBR161W MMS1Q06211 1407 aa2.27□□□□□ -2.05
CSH1YBR161W MSF1P08425 469 aa2.27□□□□□ -2.05
CSH1YBR161W YCR102CP25608 368 aa2.27□□□□□ -2.05
CSH1YBR161W SCM4P32564 187 aa2.27□□□□□ -2.05
CSH1YBR161W YOR062CP36025 268 aa2.27□□□□□ -2.05
CSH1YBR161W MRPL39P36533 70 aa2.27□□□□□ -2.05
CSH1YBR161W MRX3P38172 270 aa2.27□□□□□ -2.05
CSH1YBR161W SPG4Q04438 115 aa2.27□□□□□ -2.05
CSH1YBR161W SDO1Q07953 250 aaKnown RBP2.27□□□□□ -2.05
CSH1YBR161W COQ10Q08058 207 aa2.27□□□□□ -2.05
CSH1YBR161W SYC1Q08553 188 aaPredicted RBP2.27□□□□□ -2.05
CSH1YBR161W YHR086W-AQ3E746 53 aa2.27□□□□□ -2.05
CSH1YBR161W TY2B-LR1P0C2J3 1770 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms