RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C VAB2P40003 282 aa2.2□□□□□ -2.06
RTG3YBL103C COX15P40086 486 aa2.2□□□□□ -2.06
RTG3YBL103C YNL194CP40169 301 aa2.2□□□□□ -2.06
RTG3YBL103C RPC17P47076 161 aa2.2□□□□□ -2.06
RTG3YBL103C JHD2P47156 728 aaPredicted RBP2.2□□□□□ -2.06
RTG3YBL103C USE1P53146 245 aa2.2□□□□□ -2.06
RTG3YBL103C CSM4Q08955 156 aa2.2□□□□□ -2.06
RTG3YBL103C YOR114WQ12219 294 aa2.2□□□□□ -2.06
RTG3YBL103C AI5_BETAQ9ZZX0 354 aa2.2□□□□□ -2.06
RTG3YBL103C STH1P32597 1359 aa2.2□□□□□ -2.06
RTG3YBL103C CLB6P32943 380 aa2.2□□□□□ -2.06
RTG3YBL103C JEN1P36035 616 aa2.2□□□□□ -2.06
RTG3YBL103C MBA1P38300 278 aa2.2□□□□□ -2.06
RTG3YBL103C AVT6P40074 448 aa2.2□□□□□ -2.06
RTG3YBL103C YRB1P41920 201 aaKnown RBP2.2□□□□□ -2.06
RTG3YBL103C YJR079WP47126 109 aa2.2□□□□□ -2.06
RTG3YBL103C TPN1P53099 579 aa2.2□□□□□ -2.06
RTG3YBL103C SEC10Q06245 871 aa2.2□□□□□ -2.06
RTG3YBL103C RRS1Q08746 203 aaKnown RBP2.2□□□□□ -2.06
RTG3YBL103C SME1Q12330 94 aaPredicted RBP2.2□□□□□ -2.06
RTG3YBL103C YPL119C-AQ3E751 87 aa2.2□□□□□ -2.06
RTG3YBL103C NCB2Q92317 146 aa2.2□□□□□ -2.06
RTG3YBL103C PET494P07390 489 aaPredicted RBP2.19□□□□□ -2.06
RTG3YBL103C RPL27AP0C2H6 136 aaKnown RBP2.19□□□□□ -2.06
RTG3YBL103C RPL27BP0C2H7 136 aaKnown RBP2.19□□□□□ -2.06
RTG3YBL103C IDH1P28834 360 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
RTG3YBL103C HOM6P31116 359 aaKnown RBP2.19□□□□□ -2.06
RTG3YBL103C KRE29P40026 464 aa2.19□□□□□ -2.06
RTG3YBL103C IBA57P47158 497 aa2.19□□□□□ -2.06
RTG3YBL103C CWC23P52868 283 aaPredicted RBP2.19□□□□□ -2.06
RTG3YBL103C MRS2Q01926 470 aa2.19□□□□□ -2.06
RTG3YBL103C TRM44Q02648 567 aaKnown RBP2.19□□□□□ -2.06
RTG3YBL103C TAF9Q05027 157 aa2.19□□□□□ -2.06
RTG3YBL103C VPS68Q12016 184 aa2.19□□□□□ -2.06
RTG3YBL103C YCT1Q12235 531 aa2.19□□□□□ -2.06
RTG3YBL103C SNU23Q12368 194 aaPredicted RBP2.19□□□□□ -2.06
RTG3YBL103C YKL183C-AQ3E765 70 aa2.19□□□□□ -2.06
RTG3YBL103C YAL064W-BO13512 126 aa2.18□□□□□ -2.06
RTG3YBL103C KSS1P14681 368 aa2.18□□□□□ -2.06
RTG3YBL103C YCR102CP25608 368 aa2.18□□□□□ -2.06
RTG3YBL103C ECM4P36156 370 aa2.18□□□□□ -2.06
RTG3YBL103C CUE1P38428 203 aa2.18□□□□□ -2.06
RTG3YBL103C URA8P38627 578 aaPredicted RBP2.18□□□□□ -2.06
RTG3YBL103C SER33P40510 469 aa2.18□□□□□ -2.06
RTG3YBL103C DSN1P40568 576 aa2.18□□□□□ -2.06
RTG3YBL103C COG7P53195 279 aa2.18□□□□□ -2.06
RTG3YBL103C CTF19Q02732 369 aa2.18□□□□□ -2.06
RTG3YBL103C YPR098CQ06089 161 aa2.18□□□□□ -2.06
RTG3YBL103C SMD2Q06217 110 aaKnown RBP2.18□□□□□ -2.06
RTG3YBL103C YDL144CQ07589 356 aa2.18□□□□□ -2.06
RTG3YBL103C YOR283WQ12040 230 aaKnown RBP2.18□□□□□ -2.06
RTG3YBL103C ATG5Q12380 294 aa2.18□□□□□ -2.06
RTG3YBL103C YDR157WA0A023PZE8 133 aa2.17□□□□□ -2.06
RTG3YBL103C HTB1P02293 131 aaKnown RBP2.17□□□□□ -2.06
RTG3YBL103C HTB2P02294 131 aa2.17□□□□□ -2.06
RTG3YBL103C PEX3P28795 441 aa2.17□□□□□ -2.06
RTG3YBL103C AEP1P32493 518 aa2.17□□□□□ -2.06
RTG3YBL103C HEK2P38199 381 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06 RIP-Chip
RTG3YBL103C RMR1P53060 241 aa2.17□□□□□ -2.06
RTG3YBL103C SWS2P53937 143 aa2.17□□□□□ -2.06
RTG3YBL103C RHO3Q00245 231 aaKnown RBP2.17□□□□□ -2.06
RTG3YBL103C VPS60Q03390 229 aa2.17□□□□□ -2.06
RTG3YBL103C YML018CQ03730 393 aa2.17□□□□□ -2.06
RTG3YBL103C TVP15Q03860 143 aa2.17□□□□□ -2.06
RTG3YBL103C CDC123Q05791 360 aa2.17□□□□□ -2.06
RTG3YBL103C YMR316C-AI2HB70 103 aa2.16□□□□□ -2.06
RTG3YBL103C RPL28P02406 149 aaKnown RBP2.16□□□□□ -2.06
RTG3YBL103C CDC10P25342 322 aaKnown RBP2.16□□□□□ -2.06
RTG3YBL103C SSO1P32867 290 aa2.16□□□□□ -2.06
RTG3YBL103C TAF14P35189 244 aa2.16□□□□□ -2.06
RTG3YBL103C YBR096WP38256 230 aa2.16□□□□□ -2.06
RTG3YBL103C SEN34P39707 275 aa2.16□□□□□ -2.06
RTG3YBL103C ADO1P47143 340 aaKnown RBP2.16□□□□□ -2.06
RTG3YBL103C NBP35P52920 328 aa2.16□□□□□ -2.06
RTG3YBL103C HOP2P53187 214 aa2.16□□□□□ -2.06
RTG3YBL103C SWT21P53873 357 aaPredicted RBP2.16□□□□□ -2.06
RTG3YBL103C YMR166CQ03829 368 aa2.16□□□□□ -2.06
RTG3YBL103C BEM2P39960 2167 aaKnown RBP2.16□□□□□ -2.06
RTG3YBL103C RPL4AP10664 362 aaKnown RBP2.15□□□□□ -2.06
RTG3YBL103C SGE1P33335 543 aa2.15□□□□□ -2.06
RTG3YBL103C FZO1P38297 855 aa2.15□□□□□ -2.06
RTG3YBL103C YJR141WP47172 347 aaPredicted RBP2.15□□□□□ -2.06
RTG3YBL103C YJR146WP47174 117 aa2.15□□□□□ -2.06
RTG3YBL103C RPL4BP49626 362 aaKnown RBP2.15□□□□□ -2.06
RTG3YBL103C ALG13P53178 202 aa2.15□□□□□ -2.06
RTG3YBL103C NOP19P53317 196 aaPredicted RBP2.15□□□□□ -2.06
RTG3YBL103C CGI121Q03705 181 aaKnown RBP2.15□□□□□ -2.06
RTG3YBL103C PEX10Q05568 337 aa2.15□□□□□ -2.06
RTG3YBL103C SUE1Q06524 206 aa2.15□□□□□ -2.06
RTG3YBL103C HEM25Q07534 307 aa2.15□□□□□ -2.06
RTG3YBL103C ABP140Q08641 628 aaKnown RBP2.15□□□□□ -2.06
RTG3YBL103C YLR126CQ12288 251 aa2.15□□□□□ -2.06
RTG3YBL103C JLP1Q12358 412 aa2.15□□□□□ -2.06
RTG3YBL103C AGC1Q12482 902 aa2.15□□□□□ -2.06
RTG3YBL103C PAN1P32521 1480 aa2.15□□□□□ -2.06
RTG3YBL103C SIR4P11978 1358 aa2.15□□□□□ -2.07
RTG3YBL103C PPH21P23594 369 aa2.14□□□□□ -2.07
RTG3YBL103C RFA3P26755 122 aaKnown RBP2.14□□□□□ -2.07
RTG3YBL103C CAM1P29547 415 aaKnown RBP2.14□□□□□ -2.07
RTG3YBL103C SPL2P38839 148 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms