RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC3	YAL011W	GDS1	P41913	522 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	LSB3	P43603	459 aa	Known RBP	4.11	□□□□□ -1.75
SWC3	YAL011W	MTL1	P53214	551 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	RHO3	Q00245	231 aa	Known RBP	4.11	□□□□□ -1.75
SWC3	YAL011W	NRG1	Q03125	231 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	NUP53	Q03790	475 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	COA4	Q05809	96 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	OPT2	Q06593	877 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	YDL242W	Q07746	117 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	SOR2	Q07786	357 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	RKM5	Q12367	367 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	YKL033W-A	Q86ZR7	236 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	ATP10	P18496	279 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	YMR31	P19955	123 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	CDC13	P32797	924 aa	Known RBP	4.11	□□□□□ -1.75
SWC3	YAL011W	MSN2	P33748	704 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	YOX1	P34161	385 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	YBR137W	P38276	179 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	YAL037W	P39728	267 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	CIN5	P40917	295 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	PAM16	P42949	149 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	IRC18	P47056	224 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	YJR011C	P47086	261 aa	Predicted RBP	4.11	□□□□□ -1.75
SWC3	YAL011W	RPS12	P48589	143 aa	Known RBP	4.11	□□□□□ -1.75
SWC3	YAL011W	CUZ1	P53899	274 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	APM1	Q00776	475 aa	Predicted RBP	4.11	□□□□□ -1.75
SWC3	YAL011W	PFA5	Q03289	374 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	RVB1	Q03940	463 aa	Known RBP	4.11	□□□□□ -1.75
SWC3	YAL011W	HPF1	Q05164	967 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	TRM13	Q12383	476 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	TY1A-NL1	Q12391	440 aa	Known RBP	4.11	□□□□□ -1.75
SWC3	YAL011W	PCL9	Q12477	304 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	YDR034W-B	Q6Q5X2	51 aa		4.11	□□□□□ -1.75
SWC3	YAL011W	SIR2	P06700	562 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	RPL12A	P0CX53	165 aa	Known RBP	4.1	□□□□□ -1.75
SWC3	YAL011W	RPL12B	P0CX54	165 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	GRX2	P17695	143 aa	Known RBP	4.1	□□□□□ -1.75
SWC3	YAL011W	HSP30	P25619	332 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	RFA3	P26755	122 aa	Known RBP	4.1	□□□□□ -1.75
SWC3	YAL011W	NAM9	P27929	486 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	LAC1	P28496	418 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	RNP1	P32385	249 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	TOD6	P34219	525 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	CLG1	P35190	452 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	YBR063C	P38083	404 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	MBA1	P38300	278 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	CHL4	P38907	458 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	COX15	P40086	486 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	SYG1	P40528	902 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	PFS2	P42841	465 aa	Known RBP	4.1	□□□□□ -1.75
SWC3	YAL011W	ATG18	P43601	500 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	LYS20	P48570	428 aa	Known RBP	4.1	□□□□□ -1.75
SWC3	YAL011W	MNN10	P50108	393 aa	Known RBP	4.1	□□□□□ -1.75
SWC3	YAL011W	PGA1	P53896	198 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	INP1	Q03694	420 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	GIS1	Q03833	894 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	NDE2	Q07500	545 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	YPL199C	Q08954	240 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	TPO4	Q12256	659 aa		4.1	□□□□□ -1.75
SWC3	YAL011W	PEP4	P07267	405 aa	Known RBP	4.09	□□□□□ -1.75
SWC3	YAL011W	DSF1	P0CX08	502 aa		4.09	□□□□□ -1.75
SWC3	YAL011W	YNR073C	P0CX09	502 aa		4.09	□□□□□ -1.75
SWC3	YAL011W	SKN1	P33336	771 aa		4.09	□□□□□ -1.75
SWC3	YAL011W	UTP30	P36144	274 aa	Known RBP	4.09	□□□□□ -1.75
SWC3	YAL011W	RPP1	P38786	293 aa		4.09	□□□□□ -1.75
SWC3	YAL011W	RRP4	P38792	359 aa	Known RBP	4.09	□□□□□ -1.75
SWC3	YAL011W	IKI1	P38874	309 aa		4.09	□□□□□ -1.75
SWC3	YAL011W	BAT1	P38891	393 aa	Known RBP	4.09	□□□□□ -1.75
SWC3	YAL011W	PKP2	P53170	491 aa		4.09	□□□□□ -1.75
SWC3	YAL011W	PLM2	Q04383	521 aa		4.09	□□□□□ -1.75
SWC3	YAL011W	RGC1	Q06108	1083 aa	Known RBP	4.09	□□□□□ -1.75
SWC3	YAL011W	YPD1	Q07688	167 aa		4.09	□□□□□ -1.75
SWC3	YAL011W	YDL211C	Q12121	372 aa		4.09	□□□□□ -1.75
SWC3	YAL011W	NCE102	Q12207	173 aa	RIP-Chip data	4.09	□□□□□ -1.75	not detected
SWC3	YAL011W	FRE7	Q12333	620 aa		4.09	□□□□□ -1.75
SWC3	YAL011W	KIN28	P06242	306 aa		4.09	□□□□□ -1.76
SWC3	YAL011W	MRP1	P10662	321 aa	Known RBP	4.09	□□□□□ -1.76
SWC3	YAL011W	MCK1	P21965	375 aa	Known RBP	4.09	□□□□□ -1.76
SWC3	YAL011W	PTP1	P25044	335 aa		4.09	□□□□□ -1.76
SWC3	YAL011W	RNQ1	P25367	405 aa		4.09	□□□□□ -1.76
SWC3	YAL011W	VMA5	P31412	392 aa	Known RBP	4.09	□□□□□ -1.76
SWC3	YAL011W	MNS1	P32906	549 aa		4.09	□□□□□ -1.76
SWC3	YAL011W	RIB5	P38145	238 aa		4.09	□□□□□ -1.76
SWC3	YAL011W	FMO1	P38866	432 aa		4.09	□□□□□ -1.76
SWC3	YAL011W	PHB1	P40961	287 aa		4.09	□□□□□ -1.76
SWC3	YAL011W	YFR057W	P43625	151 aa		4.09	□□□□□ -1.76
SWC3	YAL011W	CIS3	P47001	227 aa		4.09	□□□□□ -1.76
SWC3	YAL011W	MDV1	P47025	714 aa		4.09	□□□□□ -1.76
SWC3	YAL011W	PMT5	P52867	743 aa		4.09	□□□□□ -1.76
SWC3	YAL011W	COS10	P52924	374 aa		4.09	□□□□□ -1.76
SWC3	YAL011W	YNL092W	P53934	400 aa		4.09	□□□□□ -1.76
SWC3	YAL011W	MSS11	Q03825	758 aa		4.09	□□□□□ -1.76
SWC3	YAL011W	PLP1	Q04004	230 aa		4.09	□□□□□ -1.76
SWC3	YAL011W	ASR1	Q06834	288 aa		4.09	□□□□□ -1.76
SWC3	YAL011W	TPT1	Q12272	230 aa	Known RBP	4.09	□□□□□ -1.76
SWC3	YAL011W	YLR099W-A	Q3E798	87 aa		4.09	□□□□□ -1.76
SWC3	YAL011W	MEX67	Q99257	599 aa	Known RBP	4.09	□□□□□ -1.76
SWC3	YAL011W	YDR157W	A0A023PZE8	133 aa		4.08	□□□□□ -1.76
SWC3	YAL011W	RPS18A	P0CX55	146 aa	Known RBP	4.08	□□□□□ -1.76
SWC3	YAL011W	RPS18B	P0CX56	146 aa	Predicted RBP	4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 122.9 ms