RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 TPS1Q00764 495 aaKnown RBP2.12□□□□□ -2.07
snR43snR43 YDC1Q02896 317 aa2.12□□□□□ -2.07
snR43snR43 SVL3Q03088 825 aaKnown RBP2.12□□□□□ -2.07
snR43snR43 VPS71Q03433 280 aa2.12□□□□□ -2.07
snR43snR43 DML1Q03652 475 aa2.12□□□□□ -2.07
snR43snR43 BNA7Q04066 261 aa2.12□□□□□ -2.07
snR43snR43 SNO4Q04902 237 aa2.12□□□□□ -2.07
snR43snR43 SFH1Q06168 426 aa2.12□□□□□ -2.07
snR43snR43 SKI7Q08491 747 aaPredicted RBP2.12□□□□□ -2.07
snR43snR43 HSP33Q08914 237 aaKnown RBP2.12□□□□□ -2.07
snR43snR43 HSP32Q08992 237 aa2.12□□□□□ -2.07
snR43snR43 WTM1Q12363 437 aaKnown RBP2.12□□□□□ -2.07
snR43snR43 YDL199CQ12407 687 aa2.12□□□□□ -2.07
snR43snR43 RTN2Q12443 393 aa2.12□□□□□ -2.07
snR43snR43 SCEIP03882 235 aa2.11□□□□□ -2.07
snR43snR43 GAL1P04385 528 aa2.11□□□□□ -2.07
snR43snR43 OPI3P05375 206 aa2.11□□□□□ -2.07
snR43snR43 ILV5P06168 395 aaKnown RBP2.11□□□□□ -2.07
snR43snR43 DSF1P0CX08 502 aa2.11□□□□□ -2.07
snR43snR43 YNR073CP0CX09 502 aa2.11□□□□□ -2.07
snR43snR43 PET9P18239 318 aaKnown RBP2.11□□□□□ -2.07
snR43snR43 STE50P25344 346 aa2.11□□□□□ -2.07
snR43snR43 ATP7P30902 174 aa2.11□□□□□ -2.07
snR43snR43 GSH1P32477 678 aa2.11□□□□□ -2.07
snR43snR43 IES6P32617 166 aa2.11□□□□□ -2.07
snR43snR43 NUF2P33895 451 aa2.11□□□□□ -2.07
snR43snR43 YOX1P34161 385 aa2.11□□□□□ -2.07
snR43snR43 RIB1P38066 345 aa2.11□□□□□ -2.07
snR43snR43 YBR063CP38083 404 aa2.11□□□□□ -2.07
snR43snR43 YBR241CP38142 488 aa2.11□□□□□ -2.07
snR43snR43 ARO9P38840 513 aaPredicted RBP2.11□□□□□ -2.07
snR43snR43 YHR218WP38899 603 aa2.11□□□□□ -2.07
snR43snR43 PSD1P39006 500 aa2.11□□□□□ -2.07
snR43snR43 SWD1P39706 426 aa2.11□□□□□ -2.07
snR43snR43 FLX1P40464 311 aa2.11□□□□□ -2.07
snR43snR43 HIS6P40545 261 aa2.11□□□□□ -2.07
snR43snR43 OST1P41543 476 aaKnown RBP2.11□□□□□ -2.07
snR43snR43 YJL055WP47044 245 aa2.11□□□□□ -2.07
snR43snR43 GPI8P49018 411 aa2.11□□□□□ -2.07
snR43snR43 YMR102CQ03177 834 aa2.11□□□□□ -2.07
snR43snR43 DYN3Q04949 312 aa2.11□□□□□ -2.07
snR43snR43 SRL1Q08673 210 aa2.11□□□□□ -2.07
snR43snR43 YLR108CQ12259 485 aa2.11□□□□□ -2.07
snR43snR43 RRI1Q12468 440 aa2.11□□□□□ -2.07
snR43snR43 MHF2Q3E829 80 aa2.11□□□□□ -2.07
snR43snR43 MSW1P04803 379 aa2.1□□□□□ -2.07
snR43snR43 BOS1P25385 244 aa2.1□□□□□ -2.07
snR43snR43 SUA7P29055 345 aaPredicted RBP2.1□□□□□ -2.07
snR43snR43 ACH1P32316 526 aa2.1□□□□□ -2.07
snR43snR43 SSE2P32590 693 aaKnown RBP2.1□□□□□ -2.07
snR43snR43 SUR1P33300 382 aa2.1□□□□□ -2.07
snR43snR43 HOT13P36078 116 aa2.1□□□□□ -2.07
snR43snR43 TCM62P38228 572 aaKnown RBP2.1□□□□□ -2.07
snR43snR43 CUE1P38428 203 aa2.1□□□□□ -2.07
snR43snR43 RFC3P38629 340 aa2.1□□□□□ -2.07
snR43snR43 RBG1P39729 369 aa2.1□□□□□ -2.07
snR43snR43 HPM1P40481 377 aa2.1□□□□□ -2.07
snR43snR43 STB1P42845 420 aa2.1□□□□□ -2.07
snR43snR43 LOH1P47055 219 aa2.1□□□□□ -2.07
snR43snR43 BNA1P47096 177 aa2.1□□□□□ -2.07
snR43snR43 YDL186WP48568 277 aa2.1□□□□□ -2.07
snR43snR43 UFD1P53044 361 aa2.1□□□□□ -2.07
snR43snR43 YGL101WP53144 215 aa2.1□□□□□ -2.07
snR43snR43 YNL033WP53964 284 aa2.1□□□□□ -2.07
snR43snR43 YNL019CP53975 284 aa2.1□□□□□ -2.07
snR43snR43 HHT1P61830 136 aa2.1□□□□□ -2.07
snR43snR43 RSM23Q01163 450 aa2.1□□□□□ -2.07
snR43snR43 AIM36Q03798 255 aa2.1□□□□□ -2.07
snR43snR43 MSS11Q03825 758 aa2.1□□□□□ -2.07
snR43snR43 MRPL51Q06090 140 aaPredicted RBP2.1□□□□□ -2.07
snR43snR43 DBP9Q06218 594 aaKnown RBP2.1□□□□□ -2.07
snR43snR43 TGS1Q12052 315 aa2.1□□□□□ -2.07
snR43snR43 FCY22Q12119 530 aa2.1□□□□□ -2.07
snR43snR43 USB1Q12208 290 aaKnown RBP2.1□□□□□ -2.07
snR43snR43 TDH2P00358 332 aaKnown RBP2.09□□□□□ -2.07
snR43snR43 TDH3P00359 332 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
snR43snR43 COX5BP00425 151 aa2.09□□□□□ -2.07
snR43snR43 RAD52P06778 471 aaKnown RBP2.09□□□□□ -2.07
snR43snR43 PCL1P24867 279 aa2.09□□□□□ -2.07
snR43snR43 BUD5P25300 642 aaPredicted RBP2.09□□□□□ -2.07
snR43snR43 RER1P25560 188 aa2.09□□□□□ -2.07
snR43snR43 TCA17P32613 152 aa2.09□□□□□ -2.07
snR43snR43 ARC19P33204 171 aaKnown RBP2.09□□□□□ -2.07
snR43snR43 TIF3P34167 436 aaKnown RBP2.09□□□□□ -2.07
snR43snR43 SDS22P36047 338 aa2.09□□□□□ -2.07
snR43snR43 YCR041WP37265 110 aa2.09□□□□□ -2.07
snR43snR43 SDH8P38345 138 aa2.09□□□□□ -2.07
snR43snR43 VBA2P38358 474 aaKnown RBP2.09□□□□□ -2.07
snR43snR43 FLO5P38894 1075 aa2.09□□□□□ -2.07
snR43snR43 SLM1P40485 686 aa2.09□□□□□ -2.07
snR43snR43 DUO1P53168 247 aaKnown RBP2.09□□□□□ -2.07
snR43snR43 RRN5Q02983 363 aa2.09□□□□□ -2.07
snR43snR43 SPC19Q03954 165 aa2.09□□□□□ -2.07
snR43snR43 GTB1Q04924 702 aa2.09□□□□□ -2.07
snR43snR43 GPI11Q06636 219 aa2.09□□□□□ -2.07
snR43snR43 YDL114WQ07530 308 aa2.09□□□□□ -2.07
snR43snR43 IRC25Q07951 179 aa2.09□□□□□ -2.07
snR43snR43 SYC1Q08553 188 aaPredicted RBP2.09□□□□□ -2.07
snR43snR43 SNX3Q08826 162 aaKnown RBP2.09□□□□□ -2.07
snR43snR43 RKM1Q08961 583 aaPredicted RBP2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms