RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 PHO91P27514 894 aa-3.14□□□□□ -2.91
snR40snR40 RPT5P33297 434 aaKnown RBP-3.14□□□□□ -2.91
snR40snR40 POP8P38208 133 aa-3.14□□□□□ -2.91
snR40snR40 OPY1P38271 328 aa-3.14□□□□□ -2.91
snR40snR40 CUE3P53137 624 aaKnown RBP-3.14□□□□□ -2.91
snR40snR40 IPK1Q06667 281 aa-3.14□□□□□ -2.91
snR40snR40 RDL2Q08742 149 aaKnown RBP-3.14□□□□□ -2.91
snR40snR40 PST1Q12355 444 aa-3.14□□□□□ -2.91
snR40snR40 SEC16P48415 2195 aaKnown RBP-3.15□□□□□ -2.91
snR40snR40 COT1P32798 439 aa-3.15□□□□□ -2.91
snR40snR40 VMA11P32842 164 aa-3.15□□□□□ -2.91
snR40snR40 YHR125WP38831 101 aa-3.15□□□□□ -2.91
snR40snR40 CAJ1P39101 391 aa-3.15□□□□□ -2.91
snR40snR40 YPR147CQ06522 304 aaKnown RBP-3.15□□□□□ -2.91
snR40snR40 YHR007C-AQ07074 71 aa-3.15□□□□□ -2.91
snR40snR40 RRS1Q08746 203 aaKnown RBP-3.15□□□□□ -2.91
snR40snR40 RPS16AP0CX51 143 aaKnown RBP-3.16□□□□□ -2.92
snR40snR40 RPS16BP0CX52 143 aaKnown RBP-3.16□□□□□ -2.92
snR40snR40 MSS116P15424 664 aaKnown RBP-3.16□□□□□ -2.92
snR40snR40 OCA4P25366 362 aa-3.16□□□□□ -2.92
snR40snR40 ADE1P27616 306 aa-3.16□□□□□ -2.92
snR40snR40 SHQ1P40486 507 aaPredicted RBP-3.16□□□□□ -2.92
snR40snR40 AGX1P43567 385 aa-3.16□□□□□ -2.92
snR40snR40 YJL028WP47062 111 aa-3.16□□□□□ -2.92
snR40snR40 HCH1P53834 153 aa-3.16□□□□□ -2.92
snR40snR40 NOP13P53883 403 aaKnown RBP RIP-Chip data-3.16□□□□□ -2.92not detected
snR40snR40 ACL4Q03771 387 aa-3.16□□□□□ -2.92
snR40snR40 SFG1Q12507 346 aa-3.16□□□□□ -2.92
snR40snR40 ERG9P29704 444 aa-3.17□□□□□ -2.92
snR40snR40 HTD2P38790 280 aaKnown RBP-3.17□□□□□ -2.92
snR40snR40 APE4P38821 490 aa-3.17□□□□□ -2.92
snR40snR40 RPT4P53549 437 aaKnown RBP-3.17□□□□□ -2.92
snR40snR40 YNR068CP53754 272 aa-3.17□□□□□ -2.92
snR40snR40 TRM12Q04235 462 aa-3.17□□□□□ -2.92
snR40snR40 BOP2Q06150 570 aa-3.17□□□□□ -2.92
snR40snR40 YPR117WQ06116 2489 aa-3.18□□□□□ -2.92
snR40snR40 GRX2P17695 143 aaKnown RBP-3.18□□□□□ -2.92
snR40snR40 RIM1P32445 135 aaKnown RBP-3.18□□□□□ -2.92
snR40snR40 EFB1P32471 206 aaKnown RBP-3.18□□□□□ -2.92
snR40snR40 RPS0AP32905 252 aaKnown RBP-3.18□□□□□ -2.92
snR40snR40 RCN1P36054 211 aa-3.18□□□□□ -2.92
snR40snR40 ECM13P38195 257 aa-3.18□□□□□ -2.92
snR40snR40 ERG28P40030 148 aa-3.18□□□□□ -2.92
snR40snR40 LYS12P40495 371 aaKnown RBP-3.18□□□□□ -2.92
snR40snR40 GPI8P49018 411 aa-3.18□□□□□ -2.92
snR40snR40 BNA7Q04066 261 aa-3.18□□□□□ -2.92
snR40snR40 NAT3Q06504 195 aa-3.18□□□□□ -2.92
snR40snR40 HEM25Q07534 307 aa-3.18□□□□□ -2.92
snR40snR40 FYV12Q08559 129 aa-3.18□□□□□ -2.92
snR40snR40 SIR4P11978 1358 aa-3.19□□□□□ -2.92
snR40snR40 REC107P21651 314 aa-3.19□□□□□ -2.92
snR40snR40 IFM1P25038 676 aa-3.19□□□□□ -2.92
snR40snR40 MEI4P29467 408 aa-3.19□□□□□ -2.92
snR40snR40 FAD1P38913 306 aa-3.19□□□□□ -2.92
snR40snR40 NPT1P39683 429 aaKnown RBP-3.19□□□□□ -2.92
snR40snR40 VAB2P40003 282 aa-3.19□□□□□ -2.92
snR40snR40 YRB2P40517 327 aa-3.19□□□□□ -2.92
snR40snR40 SAP185P40856 1058 aa-3.19□□□□□ -2.92
snR40snR40 UTP6Q02354 440 aaKnown RBP-3.19□□□□□ -2.92
snR40snR40 GAS3Q03655 524 aa-3.19□□□□□ -2.92
snR40snR40 YTA7P40340 1379 aa-3.2□□□□□ -2.92
snR40snR40 ARG3P05150 338 aa-3.2□□□□□ -2.92
snR40snR40 COS2P0CX12 379 aa-3.2□□□□□ -2.92
snR40snR40 COS3P0CX13 379 aa-3.2□□□□□ -2.92
snR40snR40 SEN2P16658 377 aa-3.2□□□□□ -2.92
snR40snR40 UBC6P33296 250 aaPredicted RBP-3.2□□□□□ -2.92
snR40snR40 PRS4P38063 326 aaPredicted RBP-3.2□□□□□ -2.92
snR40snR40 COS8P38723 381 aa-3.2□□□□□ -2.92
snR40snR40 SOP4P39543 234 aaPredicted RBP-3.2□□□□□ -2.92
snR40snR40 SEN34P39707 275 aa-3.2□□□□□ -2.92
snR40snR40 FIT1Q04433 528 aa-3.2□□□□□ -2.92
snR40snR40 PDR18P53756 1333 aa-3.2□□□□□ -2.92
snR40snR40 ERD1P16151 362 aa-3.21□□□□□ -2.92
snR40snR40 ARF2P19146 181 aaKnown RBP-3.21□□□□□ -2.92
snR40snR40 SMI1P32566 505 aa-3.21□□□□□ -2.92
snR40snR40 HMT1P38074 348 aa-3.21□□□□□ -2.92
snR40snR40 SMF1P38925 575 aa-3.21□□□□□ -2.92
snR40snR40 YLR446WQ06204 433 aa-3.21□□□□□ -2.92
snR40snR40 YLR012CQ07927 99 aa-3.21□□□□□ -2.92
snR40snR40 ROM2P51862 1356 aaKnown RBP-3.22□□□□□ -2.92
snR40snR40 ATP4P05626 244 aa-3.22□□□□□ -2.92
snR40snR40 SSA3P09435 649 aaKnown RBP-3.22□□□□□ -2.92
snR40snR40 LCP5P40079 357 aaPredicted RBP-3.22□□□□□ -2.92
snR40snR40 MEP1P40260 492 aa-3.22□□□□□ -2.92
snR40snR40 EMI1Q04406 187 aa-3.22□□□□□ -2.92
snR40snR40 TPO4Q12256 659 aa-3.22□□□□□ -2.92
snR40snR40 MSK1P32048 576 aa-3.23□□□□□ -2.93
snR40snR40 PXA2P34230 853 aa-3.23□□□□□ -2.93
snR40snR40 TEL1P38110 2787 aa-3.23□□□□□ -2.93
snR40snR40 HPA3P39979 161 aa-3.23□□□□□ -2.93
snR40snR40 SPO22P40511 975 aa-3.23□□□□□ -2.93
snR40snR40 RET3P53600 189 aa-3.23□□□□□ -2.93
snR40snR40 BBP1Q12365 385 aa-3.23□□□□□ -2.93
snR40snR40 GRX6Q12438 231 aa-3.23□□□□□ -2.93
snR40snR40 MDM35O60200 86 aa-3.24□□□□□ -2.93
snR40snR40 SEM1O94742 89 aa-3.24□□□□□ -2.93
snR40snR40 SIR2P06700 562 aa-3.24□□□□□ -2.93
snR40snR40 GAT4P40569 121 aa-3.24□□□□□ -2.93
snR40snR40 DOS2P54858 310 aa-3.24□□□□□ -2.93
snR40snR40 YPR078CQ06813 372 aa-3.24□□□□□ -2.93
Retrieved 100 of 5,963 RNA–protein pairs in 144.4 ms