RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W AVT6P40074 448 aa2.01□□□□□ -2.09
UBP16YPL072W YRB1P41920 201 aaKnown RBP2.01□□□□□ -2.09
UBP16YPL072W RPE1P46969 238 aa2.01□□□□□ -2.09
UBP16YPL072W HOC1P47124 396 aa2.01□□□□□ -2.09
UBP16YPL072W CAX4P53223 239 aa2.01□□□□□ -2.09
UBP16YPL072W ZRG17P53735 605 aa2.01□□□□□ -2.09
UBP16YPL072W GIM3P53900 129 aa2.01□□□□□ -2.09
UBP16YPL072W YPR147CQ06522 304 aaKnown RBP2.01□□□□□ -2.09
UBP16YPL072W SEY1Q99287 776 aa2.01□□□□□ -2.09
UBP16YPL072W THP2O13539 261 aaKnown RBP2□□□□□ -2.09
UBP16YPL072W CKA2P19454 339 aa2□□□□□ -2.09
UBP16YPL072W PBN1P25580 416 aa2□□□□□ -2.09
UBP16YPL072W ERG2P32352 222 aa2□□□□□ -2.09
UBP16YPL072W VPS21P36017 210 aaKnown RBP2□□□□□ -2.09
UBP16YPL072W MRPL39P36533 70 aa2□□□□□ -2.09
UBP16YPL072W MIC12P38341 106 aa2□□□□□ -2.09
UBP16YPL072W FRT2P39734 528 aa2□□□□□ -2.09
UBP16YPL072W RRG9P40156 214 aa2□□□□□ -2.09
UBP16YPL072W SER33P40510 469 aa2□□□□□ -2.09
UBP16YPL072W UFE1P41834 346 aa2□□□□□ -2.09
UBP16YPL072W GLG2P47011 380 aa2□□□□□ -2.09
UBP16YPL072W COQ5P49017 307 aa2□□□□□ -2.09
UBP16YPL072W NBP35P52920 328 aa2□□□□□ -2.09
UBP16YPL072W SWT21P53873 357 aaPredicted RBP2□□□□□ -2.09
UBP16YPL072W SWS2P53937 143 aa2□□□□□ -2.09
UBP16YPL072W TLG1Q03322 224 aa2□□□□□ -2.09
UBP16YPL072W NNT1Q05874 261 aa2□□□□□ -2.09
UBP16YPL072W SSQ1Q05931 657 aaPredicted RBP2□□□□□ -2.09
UBP16YPL072W DXO1Q06349 442 aa2□□□□□ -2.09
UBP16YPL072W YDL144CQ07589 356 aa2□□□□□ -2.09
UBP16YPL072W TIR4Q12218 487 aaPredicted RBP2□□□□□ -2.09
UBP16YPL072W DFM1Q12743 341 aaKnown RBP2□□□□□ -2.09
UBP16YPL072W NCB2Q92317 146 aa2□□□□□ -2.09
UBP16YPL072W AI5_BETAQ9ZZX0 354 aa2□□□□□ -2.09
UBP16YPL072W QCR6P00127 147 aa1.99□□□□□ -2.09
UBP16YPL072W CDC36P06100 191 aaPredicted RBP1.99□□□□□ -2.09
UBP16YPL072W ARG80P07249 177 aa1.99□□□□□ -2.09
UBP16YPL072W PHO80P20052 293 aa1.99□□□□□ -2.09
UBP16YPL072W ATG15P25641 520 aa1.99□□□□□ -2.09
UBP16YPL072W PRE6P40303 254 aaKnown RBP1.99□□□□□ -2.09
UBP16YPL072W RPC17P47076 161 aa1.99□□□□□ -2.09
UBP16YPL072W YJR079WP47126 109 aa1.99□□□□□ -2.09
UBP16YPL072W JHD2P47156 728 aaPredicted RBP1.99□□□□□ -2.09
UBP16YPL072W RSM27P53305 110 aa1.99□□□□□ -2.09
UBP16YPL072W YMR226CQ05016 267 aaKnown RBP1.99□□□□□ -2.09
UBP16YPL072W MRX8Q05473 314 aa1.99□□□□□ -2.09
UBP16YPL072W DCR2Q05924 578 aa1.99□□□□□ -2.09
UBP16YPL072W RRP40Q08285 240 aaKnown RBP1.99□□□□□ -2.09
UBP16YPL072W SPA2P23201 1466 aaKnown RBP1.99□□□□□ -2.09
UBP16YPL072W YBR121C-AP0C5L4 52 aa1.98□□□□□ -2.09
UBP16YPL072W YMR31P19955 123 aa1.98□□□□□ -2.09
UBP16YPL072W YCR025CP25352 136 aa1.98□□□□□ -2.09
UBP16YPL072W RPS5P26783 225 aaKnown RBP1.98□□□□□ -2.09
UBP16YPL072W PRP18P33411 251 aaPredicted RBP1.98□□□□□ -2.09
UBP16YPL072W PRY2P36110 329 aa1.98□□□□□ -2.09
UBP16YPL072W FMP41P53889 259 aaKnown RBP1.98□□□□□ -2.09
UBP16YPL072W SDC1Q03323 175 aa1.98□□□□□ -2.09
UBP16YPL072W ATG38Q05789 226 aaKnown RBP1.98□□□□□ -2.09
UBP16YPL072W YPR195CQ06594 109 aa1.98□□□□□ -2.09
UBP16YPL072W HEM25Q07534 307 aa1.98□□□□□ -2.09
UBP16YPL072W PLB3Q08108 686 aa1.98□□□□□ -2.09
UBP16YPL072W TCB3Q03640 1545 aaKnown RBP1.98□□□□□ -2.09
UBP16YPL072W AUS1Q08409 1394 aa1.98□□□□□ -2.09
UBP16YPL072W YEL009C-AA0A023PZF2 135 aa1.97□□□□□ -2.09
UBP16YPL072W YKR104WP0CE69 306 aa1.97□□□□□ -2.09
UBP16YPL072W DBP7P36120 742 aaKnown RBP1.97□□□□□ -2.09
UBP16YPL072W RIB1P38066 345 aa1.97□□□□□ -2.09
UBP16YPL072W SSH1P38353 490 aaKnown RBP1.97□□□□□ -2.09
UBP16YPL072W YHR127WP38833 243 aaKnown RBP1.97□□□□□ -2.09
UBP16YPL072W BDH1P39714 382 aa1.97□□□□□ -2.09
UBP16YPL072W RFC4P40339 323 aaKnown RBP1.97□□□□□ -2.09
UBP16YPL072W GOT1Q03554 138 aa1.97□□□□□ -2.09
UBP16YPL072W SPG4Q04438 115 aa1.97□□□□□ -2.09
UBP16YPL072W YDR124WQ04608 324 aa1.97□□□□□ -2.09
UBP16YPL072W ECM19Q06011 112 aa1.97□□□□□ -2.09
UBP16YPL072W DIB1Q06819 143 aaPredicted RBP1.97□□□□□ -2.09
UBP16YPL072W SLD7Q08457 257 aa1.97□□□□□ -2.09
UBP16YPL072W GET4Q12125 312 aa1.97□□□□□ -2.09
UBP16YPL072W YRA1Q12159 226 aaKnown RBP1.97□□□□□ -2.09
UBP16YPL072W YAL063C-AQ3E791 96 aa1.97□□□□□ -2.09
UBP16YPL072W NUP157P40064 1391 aaKnown RBP1.97□□□□□ -2.09
UBP16YPL072W RPL28P02406 149 aaKnown RBP1.96□□□□□ -2.09
UBP16YPL072W RPO26P20435 155 aa1.96□□□□□ -2.09
UBP16YPL072W YCR102CP25608 368 aa1.96□□□□□ -2.09
UBP16YPL072W IDH1P28834 360 aaKnown RBP RIP-Chip data1.96□□□□□ -2.09not detected
UBP16YPL072W CBT1P36038 271 aaPredicted RBP1.96□□□□□ -2.09
UBP16YPL072W YHL049CP38722 271 aa1.96□□□□□ -2.09
UBP16YPL072W YHB1P39676 399 aaKnown RBP1.96□□□□□ -2.09
UBP16YPL072W YMR144WP40214 342 aaKnown RBP1.96□□□□□ -2.09
UBP16YPL072W SNZ3P43545 298 aa1.96□□□□□ -2.09
UBP16YPL072W RAD17P48581 401 aa1.96□□□□□ -2.09
UBP16YPL072W SNZ2P53824 298 aa1.96□□□□□ -2.09
UBP16YPL072W AAH1P53909 347 aa1.96□□□□□ -2.09
UBP16YPL072W MRPS17Q03246 237 aaPredicted RBP1.96□□□□□ -2.09
UBP16YPL072W YDL211CQ12121 372 aa1.96□□□□□ -2.09
UBP16YPL072W YLR126CQ12288 251 aa1.96□□□□□ -2.09
UBP16YPL072W YOL085CQ99345 113 aa1.96□□□□□ -2.09
UBP16YPL072W CDC33P07260 213 aaKnown RBP1.96□□□□□ -2.1
UBP16YPL072W FUS3P16892 353 aaKnown RBP1.96□□□□□ -2.1
UBP16YPL072W CPT1P17898 393 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms