RNA–Protein interactions for RNA: YOL148C

SPT20, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT20, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT20YOL148C AVO2Q04749 426 aa8.63□□□□□ -1.03
SPT20YOL148C HEM25Q07534 307 aa8.63□□□□□ -1.03
SPT20YOL148C AIM45Q12480 344 aaKnown RBP8.63□□□□□ -1.03
SPT20YOL148C YIL134C-AQ45U18 67 aa8.63□□□□□ -1.03
SPT20YOL148C ODC2Q99297 307 aa8.63□□□□□ -1.03
SPT20YOL148C SCL1P21243 252 aaKnown RBP8.62□□□□□ -1.03
SPT20YOL148C CPR4P25334 318 aa8.62□□□□□ -1.03
SPT20YOL148C DCG1P32460 244 aa8.62□□□□□ -1.03
SPT20YOL148C NRP1P32770 719 aaKnown RBP RIP-Chip data8.62□□□□□ -1.03not detected
SPT20YOL148C ECM15P35195 104 aa8.62□□□□□ -1.03
SPT20YOL148C PTC7P38797 343 aa8.62□□□□□ -1.03
SPT20YOL148C YPT35P38815 214 aaKnown RBP8.62□□□□□ -1.03
SPT20YOL148C GGC1P38988 300 aa8.62□□□□□ -1.03
SPT20YOL148C MXR1P40029 184 aa8.62□□□□□ -1.03
SPT20YOL148C NEO1P40527 1151 aa8.62□□□□□ -1.03
SPT20YOL148C RAD17P48581 401 aa8.62□□□□□ -1.03
SPT20YOL148C YGR012WP53206 393 aa8.62□□□□□ -1.03
SPT20YOL148C CTL1Q03220 320 aaKnown RBP8.62□□□□□ -1.03
SPT20YOL148C YOR387CQ08910 206 aa8.62□□□□□ -1.03
SPT20YOL148C GAL4P04386 881 aa8.61□□□□□ -1.03
SPT20YOL148C RTC3P38804 111 aaPredicted RBP8.61□□□□□ -1.03
SPT20YOL148C GLC8P41818 229 aa8.61□□□□□ -1.03
SPT20YOL148C MOB2P43563 287 aa8.61□□□□□ -1.03
SPT20YOL148C YMR206WQ03695 313 aa8.61□□□□□ -1.03
SPT20YOL148C RTN1Q04947 295 aaKnown RBP8.61□□□□□ -1.03
SPT20YOL148C TAZ1Q06510 381 aa8.61□□□□□ -1.03
SPT20YOL148C AIM6Q07716 390 aa8.61□□□□□ -1.03
SPT20YOL148C REX4Q08237 289 aa8.61□□□□□ -1.03
SPT20YOL148C YLR118CQ12354 227 aa8.61□□□□□ -1.03
SPT20YOL148C YNR034W-AQ3E841 98 aa8.61□□□□□ -1.03
SPT20YOL148C ATP5P09457 212 aa8.61□□□□□ -1.03
SPT20YOL148C EHD3P28817 500 aa8.61□□□□□ -1.03
SPT20YOL148C SEF1P34228 1148 aa8.61□□□□□ -1.03
SPT20YOL148C ELF1P36053 145 aa8.61□□□□□ -1.03
SPT20YOL148C SDS24P38314 527 aa8.61□□□□□ -1.03
SPT20YOL148C GIP2P40036 548 aa8.61□□□□□ -1.03
SPT20YOL148C DLS1P40366 167 aa8.61□□□□□ -1.03
SPT20YOL148C AVT7P40501 490 aa8.61□□□□□ -1.03
SPT20YOL148C UBP8P50102 471 aa8.61□□□□□ -1.03
SPT20YOL148C BUD25P85052 153 aa8.61□□□□□ -1.03
SPT20YOL148C YML083CQ04526 418 aa8.61□□□□□ -1.03
SPT20YOL148C YDL085C-AQ3E7B7 68 aaKnown RBP8.61□□□□□ -1.03
SPT20YOL148C TRS20P38334 175 aa8.6□□□□□ -1.03
SPT20YOL148C YER158CP40095 573 aa8.6□□□□□ -1.03
SPT20YOL148C RPA34P47006 233 aaPredicted RBP8.6□□□□□ -1.03
SPT20YOL148C TOS2P50078 622 aa8.6□□□□□ -1.03
SPT20YOL148C UFD1P53044 361 aa8.6□□□□□ -1.03
SPT20YOL148C SAE3P89114 91 aa8.6□□□□□ -1.03
SPT20YOL148C ADD37Q03233 198 aa8.6□□□□□ -1.03
SPT20YOL148C ATC1Q04005 294 aa8.6□□□□□ -1.03
SPT20YOL148C SEC13Q04491 297 aaKnown RBP8.6□□□□□ -1.03
SPT20YOL148C NAT4Q04751 285 aa8.6□□□□□ -1.03
SPT20YOL148C CTR3Q06686 241 aa8.6□□□□□ -1.03
SPT20YOL148C SRO7Q12038 1033 aa8.6□□□□□ -1.03
SPT20YOL148C URA6P15700 204 aa8.59□□□□□ -1.03
SPT20YOL148C CKA1P15790 372 aa8.59□□□□□ -1.03
SPT20YOL148C TRR1P29509 319 aaKnown RBP8.59□□□□□ -1.03
SPT20YOL148C OMA1P36163 345 aa8.59□□□□□ -1.03
SPT20YOL148C MRPL11P36521 249 aaPredicted RBP8.59□□□□□ -1.03
SPT20YOL148C FAT1P38225 669 aa8.59□□□□□ -1.03
SPT20YOL148C CHS7P38843 316 aa8.59□□□□□ -1.03
SPT20YOL148C JHD1P40034 492 aa8.59□□□□□ -1.03
SPT20YOL148C SLS1P42900 643 aa8.59□□□□□ -1.03
SPT20YOL148C NSA1P53136 463 aaPredicted RBP8.59□□□□□ -1.03
SPT20YOL148C NPY1P53164 384 aa8.59□□□□□ -1.03
SPT20YOL148C CWC27Q02770 301 aa8.59□□□□□ -1.03
SPT20YOL148C MRP51Q02950 344 aa8.59□□□□□ -1.03
SPT20YOL148C RTT103Q05543 409 aa8.59□□□□□ -1.03
SPT20YOL148C BNA5Q05979 453 aa8.59□□□□□ -1.03
SPT20YOL148C RTK1Q12100 620 aaPredicted RBP8.59□□□□□ -1.03
SPT20YOL148C YPR064WQ12492 139 aa8.59□□□□□ -1.03
SPT20YOL148C PET20Q99373 253 aa8.59□□□□□ -1.03
SPT20YOL148C RPL31AP0C2H8 113 aaKnown RBP8.59□□□□□ -1.03
SPT20YOL148C RPL31BP0C2H9 113 aaKnown RBP8.59□□□□□ -1.03
SPT20YOL148C HNM1P19807 563 aa8.59□□□□□ -1.03
SPT20YOL148C KRR1P25586 316 aaPredicted RBP8.59□□□□□ -1.03
SPT20YOL148C KKQ8P36004 724 aa8.59□□□□□ -1.03
SPT20YOL148C GPI14P47088 403 aaKnown RBP8.59□□□□□ -1.03
SPT20YOL148C YGL262WP53054 175 aa8.59□□□□□ -1.03
SPT20YOL148C HNT1Q04344 158 aaKnown RBP8.59□□□□□ -1.03
SPT20YOL148C GMC1Q04399 608 aa8.59□□□□□ -1.03
SPT20YOL148C YLR456WQ06199 204 aa8.59□□□□□ -1.03
SPT20YOL148C TDA6Q06466 467 aa8.59□□□□□ -1.03
SPT20YOL148C FUR4P05316 633 aaKnown RBP8.58□□□□□ -1.04
SPT20YOL148C SGA1P08019 549 aa8.58□□□□□ -1.04
SPT20YOL148C HVG1P0CE11 249 aa8.58□□□□□ -1.04
SPT20YOL148C MTF1P14908 341 aaKnown RBP8.58□□□□□ -1.04
SPT20YOL148C ARF2P19146 181 aaKnown RBP8.58□□□□□ -1.04
SPT20YOL148C ERG4P25340 473 aa8.58□□□□□ -1.04
SPT20YOL148C DEG1P31115 442 aaKnown RBP8.58□□□□□ -1.04
SPT20YOL148C MRPS9P38120 278 aa8.58□□□□□ -1.04
SPT20YOL148C IML3P38265 245 aa8.58□□□□□ -1.04
SPT20YOL148C NOP16P40007 231 aaKnown RBP8.58□□□□□ -1.04
SPT20YOL148C GAT2P40209 560 aa8.58□□□□□ -1.04
SPT20YOL148C BTT1P40314 149 aaPredicted RBP8.58□□□□□ -1.04
SPT20YOL148C COX16P47081 118 aa8.58□□□□□ -1.04
SPT20YOL148C PRM1P53835 661 aa8.58□□□□□ -1.04
SPT20YOL148C SNT309Q06091 175 aaPredicted RBP8.58□□□□□ -1.04
SPT20YOL148C FDH1Q08911 376 aa8.58□□□□□ -1.04
SPT20YOL148C PAU19P0CE85 124 aa8.57□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms