RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	SOD2	P00447	233 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	FLP1	P03870	423 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	CAN1	P04817	590 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	RAD52	P06778	471 aa	Known RBP	4.21	□□□□□ -1.74
SSB2	YNL209W	HAP4	P14064	554 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	YCR102C	P25608	368 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	AHC2	P25649	128 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	VMA5	P31412	392 aa	Known RBP	4.21	□□□□□ -1.74
SSB2	YNL209W	THI4	P32318	326 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	HYM1	P32464	399 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	MRPL3	P36516	390 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	PTH1	P38876	190 aa	Known RBP	4.21	□□□□□ -1.74
SSB2	YNL209W	SKN7	P38889	622 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	PHO90	P39535	881 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	YER085C	P40058	173 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	YER121W	P40076	114 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	YIL152W	P40455	235 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	OTU1	P43558	301 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	YFR054C	P43622	192 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	PAU12	P53343	120 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	MPA43	P53583	542 aa	Predicted RBP	4.21	□□□□□ -1.74
SSB2	YNL209W	LSM7	P53905	115 aa	Known RBP	4.21	□□□□□ -1.74
SSB2	YNL209W	TPO3	Q06451	622 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	YOL073C	Q08232	322 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	HRT1	Q08273	121 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	YOR365C	Q08844	703 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	RDR1	Q08904	546 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	ENV7	Q12003	364 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	YPR063C	Q12160	140 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	MDM32	Q12171	622 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	RTN2	Q12443	393 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	FSH3	Q99369	266 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	CYC1	P00044	109 aa	Predicted RBP	4.21	□□□□□ -1.74
SSB2	YNL209W	AI1	P03875	834 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	ADK1	P07170	222 aa	Known RBP	4.21	□□□□□ -1.74
SSB2	YNL209W	DAT1	P13483	248 aa	Known RBP	4.21	□□□□□ -1.74
SSB2	YNL209W	AIM17	P23180	465 aa	Known RBP	4.21	□□□□□ -1.74
SSB2	YNL209W	YCR006C	P25350	157 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	PUT3	P25502	979 aa	Predicted RBP	4.21	□□□□□ -1.74
SSB2	YNL209W	LDS1	P31379	325 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
SSB2	YNL209W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
SSB2	YNL209W	STS1	P38637	319 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	RPP1	P38786	293 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	HTD2	P38790	280 aa	Known RBP	4.21	□□□□□ -1.74
SSB2	YNL209W	ATF1	P40353	525 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	TIR3	P40552	269 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	YAR1	P46683	200 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	SFH5	P47008	294 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	YGL235W	P53071	178 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	ERG13	P54839	491 aa	Known RBP	4.21	□□□□□ -1.74
SSB2	YNL209W	YCL001W-A	P87012	153 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	CTF19	Q02732	369 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	TDA1	Q03533	586 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	SEC13	Q04491	297 aa	Known RBP	4.21	□□□□□ -1.74
SSB2	YNL209W	YML053C	Q04978	212 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	SNT309	Q06091	175 aa	Predicted RBP	4.21	□□□□□ -1.74
SSB2	YNL209W	ASR1	Q06834	288 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	SCP1	Q08873	200 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	YOP1	Q12402	180 aa		4.21	□□□□□ -1.74
SSB2	YNL209W	CDC28	P00546	298 aa	Known RBP	4.2	□□□□□ -1.74
SSB2	YNL209W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
SSB2	YNL209W	YSF3	P0C074	85 aa	Predicted RBP	4.2	□□□□□ -1.74
SSB2	YNL209W	DEG1	P31115	442 aa	Known RBP	4.2	□□□□□ -1.74
SSB2	YNL209W	YBR220C	P38318	560 aa		4.2	□□□□□ -1.74
SSB2	YNL209W	MLH1	P38920	769 aa		4.2	□□□□□ -1.74
SSB2	YNL209W	YJR115W	P47152	169 aa		4.2	□□□□□ -1.74
SSB2	YNL209W	TPN1	P53099	579 aa		4.2	□□□□□ -1.74
SSB2	YNL209W	ERV14	P53173	138 aa		4.2	□□□□□ -1.74
SSB2	YNL209W	NCE101	Q02820	53 aa		4.2	□□□□□ -1.74
SSB2	YNL209W	YAP6	Q03935	383 aa		4.2	□□□□□ -1.74
SSB2	YNL209W	TMA10	Q06177	86 aa		4.2	□□□□□ -1.74
SSB2	YNL209W	CSM4	Q08955	156 aa		4.2	□□□□□ -1.74
SSB2	YNL209W	BTS1	Q12051	335 aa		4.2	□□□□□ -1.74
SSB2	YNL209W	PEP4	P07267	405 aa	Known RBP	4.19	□□□□□ -1.74
SSB2	YNL209W	NHP6A	P11632	93 aa	Known RBP	4.19	□□□□□ -1.74
SSB2	YNL209W	SEC12	P11655	471 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	RPB8	P20436	146 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	FUN19	P28003	413 aa	Predicted RBP	4.19	□□□□□ -1.74
SSB2	YNL209W	ERG3	P32353	365 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	ARO4	P32449	370 aa	Known RBP	4.19	□□□□□ -1.74
SSB2	YNL209W	DCG1	P32460	244 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	ECT1	P33412	323 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	HIS7	P33734	552 aa	Known RBP	4.19	□□□□□ -1.74
SSB2	YNL209W	CBT1	P36038	271 aa	Predicted RBP	4.19	□□□□□ -1.74
SSB2	YNL209W	ADH5	P38113	351 aa	Known RBP	4.19	□□□□□ -1.74
SSB2	YNL209W	ICS2	P38284	255 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	MTC4	P38335	694 aa	Known RBP	4.19	□□□□□ -1.74
SSB2	YNL209W	RRP4	P38792	359 aa	Known RBP	4.19	□□□□□ -1.74
SSB2	YNL209W	YHR122W	P38829	231 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	FET3	P38993	636 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	RMD6	P39975	231 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	PHM8	P40025	321 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	YIL086C	P40503	102 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	SNO3	P43544	222 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	ACS2	P52910	683 aa	Known RBP	4.19	□□□□□ -1.74
SSB2	YNL209W	BRR6	P53062	197 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	HCH1	P53834	153 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	TPP1	Q03796	238 aa		4.19	□□□□□ -1.74
SSB2	YNL209W	BNA5	Q05979	453 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms