RNA–Protein interactions for RNA: YNL086W

SNN1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene SNN1, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNN1YNL086W PRM15Q03262 622 aa5.05□□□□□ -1.6
SNN1YNL086W YOL131WQ08270 108 aa5.05□□□□□ -1.6
SNN1YNL086W RPN6Q12377 434 aa5.05□□□□□ -1.6
SNN1YNL086W YKL018C-AQ3E7A7 99 aa5.05□□□□□ -1.6
SNN1YNL086W PMR1P13586 950 aa5.04□□□□□ -1.6
SNN1YNL086W MER1P16523 270 aa5.04□□□□□ -1.6
SNN1YNL086W GIT1P25346 518 aa5.04□□□□□ -1.6
SNN1YNL086W RPS2P25443 254 aaKnown RBP5.04□□□□□ -1.6
SNN1YNL086W LHP1P33399 275 aaKnown RBP5.04□□□□□ -1.6
SNN1YNL086W FLO5P38894 1075 aa5.04□□□□□ -1.6
SNN1YNL086W RTS2P40962 232 aa5.04□□□□□ -1.6
SNN1YNL086W GAB1P41733 394 aa5.04□□□□□ -1.6
SNN1YNL086W GPI1P53306 609 aa5.04□□□□□ -1.6
SNN1YNL086W HSP31Q04432 237 aa5.04□□□□□ -1.6
SNN1YNL086W SNA4Q07549 140 aa5.04□□□□□ -1.6
SNN1YNL086W GSH2Q08220 491 aa5.04□□□□□ -1.6
SNN1YNL086W FIT3Q08907 204 aa5.04□□□□□ -1.6
SNN1YNL086W UIP4Q08926 304 aa5.04□□□□□ -1.6
SNN1YNL086W NIP7Q08962 181 aaKnown RBP5.04□□□□□ -1.6
SNN1YNL086W SCEIP03882 235 aa5.03□□□□□ -1.6
SNN1YNL086W RPS23AP0CX29 145 aaKnown RBP5.03□□□□□ -1.6
SNN1YNL086W RPS23BP0CX30 145 aa5.03□□□□□ -1.6
SNN1YNL086W UGA1P17649 471 aa5.03□□□□□ -1.6
SNN1YNL086W HSP30P25619 332 aa5.03□□□□□ -1.6
SNN1YNL086W RPS5P26783 225 aaKnown RBP5.03□□□□□ -1.6
SNN1YNL086W MDH3P32419 343 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
SNN1YNL086W CLB6P32943 380 aa5.03□□□□□ -1.6
SNN1YNL086W BIG1P38813 335 aa5.03□□□□□ -1.6
SNN1YNL086W RGI1P40043 161 aaPredicted RBP5.03□□□□□ -1.6
SNN1YNL086W DSL1P53847 754 aa5.03□□□□□ -1.6
SNN1YNL086W YPL077CQ02831 240 aa5.03□□□□□ -1.6
SNN1YNL086W IZH1Q03419 316 aa5.03□□□□□ -1.6
SNN1YNL086W SCS7Q03529 384 aa5.03□□□□□ -1.6
SNN1YNL086W YDR102CQ03864 110 aa5.03□□□□□ -1.6
SNN1YNL086W KRE28Q04431 385 aa5.03□□□□□ -1.6
SNN1YNL086W ADH6Q04894 360 aaKnown RBP5.03□□□□□ -1.6
SNN1YNL086W PHO92Q06390 306 aa5.03□□□□□ -1.6
SNN1YNL086W MUM3Q08750 479 aa5.03□□□□□ -1.6
SNN1YNL086W ATX2Q12067 313 aa5.03□□□□□ -1.6
SNN1YNL086W TFB5Q3E7C1 72 aaPredicted RBP5.03□□□□□ -1.6
SNN1YNL086W FSH3Q99369 266 aa5.03□□□□□ -1.6
SNN1YNL086W RPS16AP0CX51 143 aaKnown RBP5.02□□□□□ -1.61
SNN1YNL086W RPS16BP0CX52 143 aaKnown RBP5.02□□□□□ -1.61
SNN1YNL086W YCR007CP25354 239 aa5.02□□□□□ -1.61
SNN1YNL086W MRPL4P36517 319 aa5.02□□□□□ -1.61
SNN1YNL086W MRPL17P36528 281 aa5.02□□□□□ -1.61
SNN1YNL086W RFC3P38629 340 aa5.02□□□□□ -1.61
SNN1YNL086W GLR1P41921 483 aaKnown RBP5.02□□□□□ -1.61
SNN1YNL086W YJR011CP47086 261 aaPredicted RBP5.02□□□□□ -1.61
SNN1YNL086W YDL186WP48568 277 aa5.02□□□□□ -1.61
SNN1YNL086W BRR6P53062 197 aa5.02□□□□□ -1.61
SNN1YNL086W YMR279CQ03263 540 aa5.02□□□□□ -1.61
SNN1YNL086W YPR147CQ06522 304 aaKnown RBP5.02□□□□□ -1.61
SNN1YNL086W GAT3Q07928 141 aa5.02□□□□□ -1.61
SNN1YNL086W YCL048W-AQ2V2Q2 79 aa5.02□□□□□ -1.61
SNN1YNL086W YHR214C-EQ8TGK0 99 aa5.02□□□□□ -1.61
SNN1YNL086W ARO3P14843 370 aaKnown RBP5.01□□□□□ -1.61
SNN1YNL086W DBP3P20447 523 aaKnown RBP5.01□□□□□ -1.61
SNN1YNL086W VPS17P32913 551 aa5.01□□□□□ -1.61
SNN1YNL086W SPT10P35208 640 aa5.01□□□□□ -1.61
SNN1YNL086W ADH5P38113 351 aaKnown RBP5.01□□□□□ -1.61
SNN1YNL086W SYF2P53277 215 aaPredicted RBP5.01□□□□□ -1.61
SNN1YNL086W APJ1P53940 528 aa5.01□□□□□ -1.61
SNN1YNL086W SAM50P53969 484 aa5.01□□□□□ -1.61
SNN1YNL086W LAP3Q01532 483 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
SNN1YNL086W MSS11Q03825 758 aa5.01□□□□□ -1.61
SNN1YNL086W RVB1Q03940 463 aaKnown RBP5.01□□□□□ -1.61
SNN1YNL086W DBP9Q06218 594 aaKnown RBP5.01□□□□□ -1.61
SNN1YNL086W TAZ1Q06510 381 aa5.01□□□□□ -1.61
SNN1YNL086W HMS1Q12398 434 aa5.01□□□□□ -1.61
SNN1YNL086W YOR343CQ12484 108 aa5.01□□□□□ -1.61
SNN1YNL086W EXO70P19658 623 aa5□□□□□ -1.61
SNN1YNL086W YNK1P36010 153 aaKnown RBP5□□□□□ -1.61
SNN1YNL086W FRE2P36033 711 aa5□□□□□ -1.61
SNN1YNL086W SPC34P36131 295 aa5□□□□□ -1.61
SNN1YNL086W RRP4P38792 359 aaKnown RBP5□□□□□ -1.61
SNN1YNL086W MLH1P38920 769 aa5□□□□□ -1.61
SNN1YNL086W SAS2P40963 338 aa5□□□□□ -1.61
SNN1YNL086W YFH1Q07540 174 aa5□□□□□ -1.61
SNN1YNL086W YNL162W-AQ3E7A8 72 aa5□□□□□ -1.61
SNN1YNL086W YPK2P18961 677 aa4.99□□□□□ -1.61
SNN1YNL086W HNM1P19807 563 aa4.99□□□□□ -1.61
SNN1YNL086W CCA1P21269 546 aa4.99□□□□□ -1.61
SNN1YNL086W RPS1BP23248 255 aaKnown RBP4.99□□□□□ -1.61
SNN1YNL086W CLG1P35190 452 aa4.99□□□□□ -1.61
SNN1YNL086W SOR1P35497 357 aaKnown RBP4.99□□□□□ -1.61
SNN1YNL086W RCK1P38622 512 aa4.99□□□□□ -1.61
SNN1YNL086W YIF1P53845 314 aaKnown RBP4.99□□□□□ -1.61
SNN1YNL086W VPS60Q03390 229 aa4.99□□□□□ -1.61
SNN1YNL086W YDR387CQ04162 555 aa4.99□□□□□ -1.61
SNN1YNL086W GMC1Q04399 608 aa4.99□□□□□ -1.61
SNN1YNL086W CTS2Q06350 511 aa4.99□□□□□ -1.61
SNN1YNL086W SOR2Q07786 357 aa4.99□□□□□ -1.61
SNN1YNL086W APE2P32454 952 aaKnown RBP4.98□□□□□ -1.61
SNN1YNL086W CTR2P38865 189 aa4.98□□□□□ -1.61
SNN1YNL086W ISC1P40015 477 aaKnown RBP4.98□□□□□ -1.61
SNN1YNL086W PCL6P40038 420 aa4.98□□□□□ -1.61
SNN1YNL086W MDE1P47095 244 aa4.98□□□□□ -1.61
SNN1YNL086W MRM2P53123 320 aa4.98□□□□□ -1.61
SNN1YNL086W COS1P53822 381 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms