RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C LCB3P47013 409 aa1.74□□□□□ -2.13
RTT101YJL047C YJR054WP47114 497 aa1.74□□□□□ -2.13
RTT101YJL047C VMA10P48836 114 aaKnown RBP1.74□□□□□ -2.13
RTT101YJL047C RCF2P53721 224 aa1.74□□□□□ -2.13
RTT101YJL047C FYV6P53913 173 aa1.74□□□□□ -2.13
RTT101YJL047C PET191Q02772 108 aa1.74□□□□□ -2.13
RTT101YJL047C TAF9Q05027 157 aa1.74□□□□□ -2.13
RTT101YJL047C SEI1Q06058 285 aa1.74□□□□□ -2.13
RTT101YJL047C RFU1Q08003 200 aa1.74□□□□□ -2.13
RTT101YJL047C YOL019WQ08157 551 aa1.74□□□□□ -2.13
RTT101YJL047C FCY22Q12119 530 aa1.74□□□□□ -2.13
RTT101YJL047C BI3Q9ZZW7 517 aa1.74□□□□□ -2.13
RTT101YJL047C PHO2P07269 559 aa1.73□□□□□ -2.13
RTT101YJL047C TAH1P25638 111 aaPredicted RBP1.73□□□□□ -2.13
RTT101YJL047C OMA1P36163 345 aa1.73□□□□□ -2.13
RTT101YJL047C MRPL28P36527 147 aa1.73□□□□□ -2.13
RTT101YJL047C HEK2P38199 381 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
RTT101YJL047C ECM33P38248 429 aaKnown RBP1.73□□□□□ -2.13
RTT101YJL047C CHL4P38907 458 aa1.73□□□□□ -2.13
RTT101YJL047C IRC24P40580 263 aa1.73□□□□□ -2.13
RTT101YJL047C AZF1P41696 914 aa1.73□□□□□ -2.13
RTT101YJL047C MCM22P47167 239 aa1.73□□□□□ -2.13
RTT101YJL047C YMR181CQ03231 154 aa1.73□□□□□ -2.13
RTT101YJL047C YMR279CQ03263 540 aa1.73□□□□□ -2.13
RTT101YJL047C SFM1Q12314 213 aa1.73□□□□□ -2.13
RTT101YJL047C PRM4Q12498 284 aa1.73□□□□□ -2.13
RTT101YJL047C YAL064W-BO13512 126 aa1.73□□□□□ -2.13
RTT101YJL047C YHR139C-AO13536 103 aa1.73□□□□□ -2.13
RTT101YJL047C YKR104WP0CE69 306 aa1.73□□□□□ -2.13
RTT101YJL047C CTA1P15202 515 aa1.73□□□□□ -2.13
RTT101YJL047C MDM10P18409 493 aa1.73□□□□□ -2.13
RTT101YJL047C MRPL20P22354 195 aaPredicted RBP1.73□□□□□ -2.13
RTT101YJL047C ARO7P32178 256 aa1.73□□□□□ -2.13
RTT101YJL047C AEP1P32493 518 aa1.73□□□□□ -2.13
RTT101YJL047C KTI12P34253 313 aaKnown RBP1.73□□□□□ -2.13
RTT101YJL047C HOT13P36078 116 aa1.73□□□□□ -2.13
RTT101YJL047C MBA1P38300 278 aa1.73□□□□□ -2.13
RTT101YJL047C ARC40P38328 384 aaKnown RBP1.73□□□□□ -2.13
RTT101YJL047C SLM6P38343 150 aa1.73□□□□□ -2.13
RTT101YJL047C YAP3P38749 330 aa1.73□□□□□ -2.13
RTT101YJL047C COG5P53951 403 aa1.73□□□□□ -2.13
RTT101YJL047C ABF2Q02486 183 aa1.73□□□□□ -2.13
RTT101YJL047C YML018CQ03730 393 aa1.73□□□□□ -2.13
RTT101YJL047C SPG4Q04438 115 aa1.73□□□□□ -2.13
RTT101YJL047C YHC1Q05900 231 aaKnown RBP1.73□□□□□ -2.13
RTT101YJL047C YLR050CQ12155 161 aaKnown RBP1.73□□□□□ -2.13
RTT101YJL047C TFC7Q12415 435 aa1.73□□□□□ -2.13
RTT101YJL047C PCL9Q12477 304 aa1.73□□□□□ -2.13
RTT101YJL047C YOR1P53049 1477 aa1.72□□□□□ -2.13
RTT101YJL047C HEM4P06174 275 aa1.72□□□□□ -2.13
RTT101YJL047C CYC3P06182 269 aa1.72□□□□□ -2.13
RTT101YJL047C STE7P06784 515 aa1.72□□□□□ -2.13
RTT101YJL047C MRS1P07266 363 aa1.72□□□□□ -2.13
RTT101YJL047C RNA14P25298 677 aaKnown RBP1.72□□□□□ -2.13
RTT101YJL047C ALK2P32789 676 aaPredicted RBP1.72□□□□□ -2.13
RTT101YJL047C UPS2P35200 230 aa1.72□□□□□ -2.13
RTT101YJL047C RRP3P38712 501 aaKnown RBP1.72□□□□□ -2.13
RTT101YJL047C YHL049CP38722 271 aa1.72□□□□□ -2.13
RTT101YJL047C COX14P39103 70 aa1.72□□□□□ -2.13
RTT101YJL047C OXA1P39952 402 aa1.72□□□□□ -2.13
RTT101YJL047C PAN6P40459 309 aa1.72□□□□□ -2.13
RTT101YJL047C MOG1P47123 218 aa1.72□□□□□ -2.13
RTT101YJL047C BXI1P48558 297 aa1.72□□□□□ -2.13
RTT101YJL047C SUN4P53616 420 aa1.72□□□□□ -2.13
RTT101YJL047C CRZ1P53968 678 aa1.72□□□□□ -2.13
RTT101YJL047C SDC1Q03323 175 aa1.72□□□□□ -2.13
RTT101YJL047C INM2Q05533 292 aa1.72□□□□□ -2.13
RTT101YJL047C FAR10Q06001 478 aa1.72□□□□□ -2.13
RTT101YJL047C MSA1Q08471 629 aa1.72□□□□□ -2.13
RTT101YJL047C OSW1Q08692 278 aa1.72□□□□□ -2.13
RTT101YJL047C RDI1Q12434 202 aa1.72□□□□□ -2.13
RTT101YJL047C RAX2Q12465 1220 aa1.72□□□□□ -2.13
RTT101YJL047C CSR2Q12734 1121 aa1.72□□□□□ -2.13
RTT101YJL047C RAD50P12753 1312 aa1.72□□□□□ -2.13
RTT101YJL047C GCN3P14741 305 aa1.72□□□□□ -2.13
RTT101YJL047C URE2P23202 354 aaKnown RBP1.72□□□□□ -2.13
RTT101YJL047C MIR1P23641 311 aaKnown RBP1.72□□□□□ -2.13
RTT101YJL047C RNQ1P25367 405 aa1.72□□□□□ -2.13
RTT101YJL047C FUN26P31381 517 aa1.72□□□□□ -2.13
RTT101YJL047C ATS1P31386 333 aa1.72□□□□□ -2.13
RTT101YJL047C YGR201CP42936 225 aa1.72□□□□□ -2.13
RTT101YJL047C YGL034CP53186 121 aa1.72□□□□□ -2.13
RTT101YJL047C SHY1P53266 389 aa1.72□□□□□ -2.13
RTT101YJL047C MPA43P53583 542 aaPredicted RBP1.72□□□□□ -2.13
RTT101YJL047C NRM1P53718 249 aa1.72□□□□□ -2.13
RTT101YJL047C YNL046WP53956 172 aa1.72□□□□□ -2.13
RTT101YJL047C RSC9Q03124 581 aa1.72□□□□□ -2.13
RTT101YJL047C YET2Q04210 160 aa1.72□□□□□ -2.13
RTT101YJL047C DYN3Q04949 312 aa1.72□□□□□ -2.13
RTT101YJL047C EAF3Q12432 401 aa1.72□□□□□ -2.13
RTT101YJL047C IGO2Q9P305 131 aa1.72□□□□□ -2.13
RTT101YJL047C MCK1P21965 375 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C TRX3P25372 127 aa1.71□□□□□ -2.14
RTT101YJL047C YCR090CP25654 182 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C MIX23P38162 196 aa1.71□□□□□ -2.14
RTT101YJL047C MRP21P38175 177 aa1.71□□□□□ -2.14
RTT101YJL047C SHE3P38272 425 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C MTC4P38335 694 aaKnown RBP1.71□□□□□ -2.14
RTT101YJL047C VMA22P38784 181 aa1.71□□□□□ -2.14
RTT101YJL047C FLO5P38894 1075 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 68.3 ms