RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W SHO1P40073 367 aa4.48□□□□□ -1.69
MSH1YHR120W YIL166CP40445 542 aa4.48□□□□□ -1.69
MSH1YHR120W XBP1P40489 647 aa4.48□□□□□ -1.69
MSH1YHR120W TIR3P40552 269 aa4.48□□□□□ -1.69
MSH1YHR120W CAT5P41735 233 aa4.48□□□□□ -1.69
MSH1YHR120W JAC1P53193 184 aa4.48□□□□□ -1.69
MSH1YHR120W HHO1P53551 258 aa4.48□□□□□ -1.69
MSH1YHR120W SMX3P54999 86 aaPredicted RBP4.48□□□□□ -1.69
MSH1YHR120W SSY1Q03770 852 aa4.48□□□□□ -1.69
MSH1YHR120W TY1A-MR1Q04215 440 aa4.48□□□□□ -1.69
MSH1YHR120W SNO4Q04902 237 aa4.48□□□□□ -1.69
MSH1YHR120W HRI1Q05905 244 aaKnown RBP4.48□□□□□ -1.69
MSH1YHR120W HSP33Q08914 237 aaKnown RBP4.48□□□□□ -1.69
MSH1YHR120W HSP32Q08992 237 aa4.48□□□□□ -1.69
MSH1YHR120W TY1A-BLQ12266 440 aa4.48□□□□□ -1.69
MSH1YHR120W YGL194C-AQ2V2P6 80 aa4.48□□□□□ -1.69
MSH1YHR120W PDX1P16451 410 aa4.47□□□□□ -1.69
MSH1YHR120W ERG24P32462 438 aaKnown RBP4.47□□□□□ -1.69
MSH1YHR120W EMP24P32803 203 aaKnown RBP4.47□□□□□ -1.69
MSH1YHR120W TCM62P38228 572 aaKnown RBP4.47□□□□□ -1.69
MSH1YHR120W MGE1P38523 228 aa4.47□□□□□ -1.69
MSH1YHR120W QDR1P40475 563 aa4.47□□□□□ -1.69
MSH1YHR120W SDP1P40479 209 aa4.47□□□□□ -1.69
MSH1YHR120W NUP42P49686 430 aaKnown RBP4.47□□□□□ -1.69
MSH1YHR120W OGG1P53397 376 aaPredicted RBP4.47□□□□□ -1.69
MSH1YHR120W ALG12P53730 551 aa4.47□□□□□ -1.69
MSH1YHR120W INN1P53901 409 aa4.47□□□□□ -1.69
MSH1YHR120W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
MSH1YHR120W UTP15Q04305 513 aaKnown RBP4.47□□□□□ -1.69
MSH1YHR120W RDL2Q08742 149 aaKnown RBP4.47□□□□□ -1.69
MSH1YHR120W YLR108CQ12259 485 aa4.47□□□□□ -1.69
MSH1YHR120W CBP6P07253 162 aaPredicted RBP4.47□□□□□ -1.69
MSH1YHR120W MDH2P22133 377 aa4.47□□□□□ -1.69
MSH1YHR120W MAG1P22134 296 aaKnown RBP4.47□□□□□ -1.69
MSH1YHR120W ECM31P38122 312 aa4.47□□□□□ -1.69
MSH1YHR120W MAL32P38158 584 aa4.47□□□□□ -1.69
MSH1YHR120W YMR262WP38430 313 aa4.47□□□□□ -1.69
MSH1YHR120W RPP1P38786 293 aa4.47□□□□□ -1.69
MSH1YHR120W LSM12P38828 187 aaKnown RBP4.47□□□□□ -1.69
MSH1YHR120W CCC1P47818 322 aa4.47□□□□□ -1.69
MSH1YHR120W MAL12P53341 584 aa4.47□□□□□ -1.69
MSH1YHR120W YNR040WP53736 256 aa4.47□□□□□ -1.69
MSH1YHR120W YPL039WQ03080 316 aa4.47□□□□□ -1.69
MSH1YHR120W TY1A-DR2Q03964 440 aaKnown RBP4.47□□□□□ -1.69
MSH1YHR120W TAZ1Q06510 381 aa4.47□□□□□ -1.69
MSH1YHR120W MAK32P23060 363 aa4.47□□□□□ -1.69
MSH1YHR120W AIM17P23180 465 aaKnown RBP4.47□□□□□ -1.69
MSH1YHR120W MRP17P28778 131 aa4.47□□□□□ -1.69
MSH1YHR120W LDS1P31379 325 aa4.47□□□□□ -1.69
MSH1YHR120W TIM12P32830 109 aa4.47□□□□□ -1.69
MSH1YHR120W MDL1P33310 695 aa4.47□□□□□ -1.69
MSH1YHR120W BMT5P40493 336 aa4.47□□□□□ -1.69
MSH1YHR120W MID1P41821 548 aa4.47□□□□□ -1.69
MSH1YHR120W ANT1Q06497 328 aa4.47□□□□□ -1.69
MSH1YHR120W RDI1Q12434 202 aa4.47□□□□□ -1.69
MSH1YHR120W SET6Q12529 373 aa4.47□□□□□ -1.69
MSH1YHR120W YPK2P18961 677 aa4.46□□□□□ -1.7
MSH1YHR120W ECM25P32525 599 aa4.46□□□□□ -1.7
MSH1YHR120W MRT4P33201 236 aaKnown RBP4.46□□□□□ -1.7
MSH1YHR120W PEX32P38292 413 aa4.46□□□□□ -1.7
MSH1YHR120W SDS24P38314 527 aa4.46□□□□□ -1.7
MSH1YHR120W SKN7P38889 622 aa4.46□□□□□ -1.7
MSH1YHR120W SLI1P53304 468 aa4.46□□□□□ -1.7
MSH1YHR120W GRE1Q08969 168 aa4.46□□□□□ -1.7
MSH1YHR120W RLM1Q12224 676 aa4.46□□□□□ -1.7
MSH1YHR120W BOS1P25385 244 aa4.46□□□□□ -1.7
MSH1YHR120W CNE1P27825 502 aa4.46□□□□□ -1.7
MSH1YHR120W PDC2P32896 925 aa4.46□□□□□ -1.7
MSH1YHR120W YKL071WP36086 256 aa4.46□□□□□ -1.7
MSH1YHR120W YIL024CP40543 189 aa4.46□□□□□ -1.7
MSH1YHR120W YGR126WP53274 230 aa4.46□□□□□ -1.7
MSH1YHR120W MRPL51Q06090 140 aaPredicted RBP4.46□□□□□ -1.7
MSH1YHR120W GRC3Q07845 632 aa4.46□□□□□ -1.7
MSH1YHR120W AAC1P04710 309 aa4.45□□□□□ -1.7
MSH1YHR120W RPP1AP05318 106 aaPredicted RBP4.45□□□□□ -1.7
MSH1YHR120W KIN28P06242 306 aa4.45□□□□□ -1.7
MSH1YHR120W CPR4P25334 318 aa4.45□□□□□ -1.7
MSH1YHR120W ATG15P25641 520 aa4.45□□□□□ -1.7
MSH1YHR120W NAB2P32505 525 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
MSH1YHR120W VBA2P38358 474 aaKnown RBP4.45□□□□□ -1.7
MSH1YHR120W ARO9P38840 513 aaPredicted RBP4.45□□□□□ -1.7
MSH1YHR120W TOK1P40310 691 aa4.45□□□□□ -1.7
MSH1YHR120W NIT2P47016 307 aa4.45□□□□□ -1.7
MSH1YHR120W PHB2P50085 310 aa4.45□□□□□ -1.7
MSH1YHR120W CAF40P53829 373 aa4.45□□□□□ -1.7
MSH1YHR120W IRC19Q07843 230 aa4.45□□□□□ -1.7
MSH1YHR120W SNU23Q12368 194 aaPredicted RBP4.45□□□□□ -1.7
MSH1YHR120W SOD2P00447 233 aa4.45□□□□□ -1.7
MSH1YHR120W TRR1P29509 319 aaKnown RBP4.45□□□□□ -1.7
MSH1YHR120W SLC1P33333 303 aa4.45□□□□□ -1.7
MSH1YHR120W SYS1P41544 203 aa4.45□□□□□ -1.7
MSH1YHR120W LYS20P48570 428 aaKnown RBP4.45□□□□□ -1.7
MSH1YHR120W LYS5P50113 272 aa4.45□□□□□ -1.7
MSH1YHR120W FMP48P53233 369 aa4.45□□□□□ -1.7
MSH1YHR120W MPP6P53725 186 aaPredicted RBP4.45□□□□□ -1.7
MSH1YHR120W SPR28Q04921 423 aa4.45□□□□□ -1.7
MSH1YHR120W CRR1Q05790 422 aa4.45□□□□□ -1.7
MSH1YHR120W AIM6Q07716 390 aa4.45□□□□□ -1.7
MSH1YHR120W COQ10Q08058 207 aa4.45□□□□□ -1.7
MSH1YHR120W LYS21Q12122 440 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms