RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	ADO1	P47143	340 aa	Known RBP	2.26	□□□□□ -2.05
TFB1	YDR311W	TRM9	P49957	279 aa		2.26	□□□□□ -2.05
TFB1	YDR311W	COG7	P53195	279 aa		2.26	□□□□□ -2.05
TFB1	YDR311W	MRS2	Q01926	470 aa		2.26	□□□□□ -2.05
TFB1	YDR311W	GRE1	Q08969	168 aa		2.26	□□□□□ -2.05
TFB1	YDR311W	RFM1	Q12192	310 aa		2.26	□□□□□ -2.05
TFB1	YDR311W	YAL063C-A	Q3E791	96 aa		2.26	□□□□□ -2.05
TFB1	YDR311W	YMR316C-A	I2HB70	103 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	RPL27A	P0C2H6	136 aa	Known RBP	2.25	□□□□□ -2.05
TFB1	YDR311W	RPL27B	P0C2H7	136 aa	Known RBP	2.25	□□□□□ -2.05
TFB1	YDR311W	IMP1	P28627	190 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	2.25	□□□□□ -2.05	not detected
TFB1	YDR311W	MRPL3	P36516	390 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	SMP1	P38128	452 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	YIL012W	P40551	113 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	MGA1	P53050	456 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	RHO3	Q00245	231 aa	Known RBP	2.25	□□□□□ -2.05
TFB1	YDR311W	ABP140	Q08641	628 aa	Known RBP	2.25	□□□□□ -2.05
TFB1	YDR311W	RRG7	Q08774	242 aa	Predicted RBP	2.25	□□□□□ -2.05
TFB1	YDR311W	SIR4	P11978	1358 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	YKR104W	P0CE69	306 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	GDH2	P33327	1092 aa	Known RBP	2.25	□□□□□ -2.05
TFB1	YDR311W	POP8	P38208	133 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	IKI1	P38874	309 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	KRE29	P40026	464 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	RRG9	P40156	214 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	YJR149W	P47177	404 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	LIF1	P53150	421 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	HOP2	P53187	214 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	API2	Q04413	109 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	FAR8	Q05040	523 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	RAX2	Q12465	1220 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	YPL229W	Q99395	206 aa		2.25	□□□□□ -2.05
TFB1	YDR311W	QCR7	P00128	127 aa		2.24	□□□□□ -2.05
TFB1	YDR311W	RPL28	P02406	149 aa	Known RBP	2.24	□□□□□ -2.05
TFB1	YDR311W	PHO80	P20052	293 aa		2.24	□□□□□ -2.05
TFB1	YDR311W	PPH21	P23594	369 aa		2.24	□□□□□ -2.05
TFB1	YDR311W	CAM1	P29547	415 aa	Known RBP	2.24	□□□□□ -2.05
TFB1	YDR311W	PRX1	P34227	261 aa	Known RBP	2.24	□□□□□ -2.05
TFB1	YDR311W	SHE3	P38272	425 aa	Known RBP	2.24	□□□□□ -2.05
TFB1	YDR311W	FZO1	P38297	855 aa		2.24	□□□□□ -2.05
TFB1	YDR311W	SLX1	P38324	304 aa		2.24	□□□□□ -2.05
TFB1	YDR311W	GGC1	P38988	300 aa		2.24	□□□□□ -2.05
TFB1	YDR311W	ERG10	P41338	398 aa	Known RBP	2.24	□□□□□ -2.05
TFB1	YDR311W	GAB1	P41733	394 aa		2.24	□□□□□ -2.05
TFB1	YDR311W	YFL064C	P43540	174 aa		2.24	□□□□□ -2.05
TFB1	YDR311W	CPR7	P47103	393 aa		2.24	□□□□□ -2.05
TFB1	YDR311W	PRP24	P49960	444 aa	Known RBP	2.24	□□□□□ -2.05
TFB1	YDR311W	MIC26	P50087	233 aa		2.24	□□□□□ -2.05
TFB1	YDR311W	DIA1	P54005	336 aa		2.24	□□□□□ -2.05
TFB1	YDR311W	SPG4	Q04438	115 aa		2.24	□□□□□ -2.05
TFB1	YDR311W	PAL1	Q05518	499 aa	Known RBP	2.24	□□□□□ -2.05
TFB1	YDR311W	PEX10	Q05568	337 aa		2.24	□□□□□ -2.05
TFB1	YDR311W	HRT3	Q12347	344 aa		2.24	□□□□□ -2.05
TFB1	YDR311W	JLP1	Q12358	412 aa		2.24	□□□□□ -2.05
TFB1	YDR311W	DCN1	Q12395	269 aa		2.24	□□□□□ -2.05
TFB1	YDR311W	TUS1	Q06412	1307 aa		2.24	□□□□□ -2.05
TFB1	YDR311W	ATP7	P30902	174 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	SGE1	P33335	543 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	TIP20	P33891	701 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	ZRT3	P34240	503 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	EFM1	P38732	585 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	YHR127W	P38833	243 aa	Known RBP	2.23	□□□□□ -2.05
TFB1	YDR311W	PRE6	P40303	254 aa	Known RBP	2.23	□□□□□ -2.05
TFB1	YDR311W	MEP2	P41948	499 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	TOS8	P53147	276 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	VHS1	Q03785	461 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	SEI1	Q06058	285 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	ATG17	Q06410	417 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	YOL029C	Q08187	201 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	BCY1	P07278	416 aa	Known RBP	2.23	□□□□□ -2.05
TFB1	YDR311W	SNA3	P14359	133 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	CAT2	P32796	670 aa	Known RBP	2.23	□□□□□ -2.05
TFB1	YDR311W	SSO1	P32867	290 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	BMT5	P40493	336 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	NUP57	P48837	541 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	YGL034C	P53186	121 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	GET1	P53192	235 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	ACT1	P60010	375 aa	Known RBP	2.23	□□□□□ -2.05
TFB1	YDR311W	GIM5	Q04493	163 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	ECM19	Q06011	112 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	YPR147C	Q06522	304 aa	Known RBP	2.23	□□□□□ -2.05
TFB1	YDR311W	HEM25	Q07534	307 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	TLG2	Q08144	397 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	TRM10	Q12400	293 aa		2.23	□□□□□ -2.05
TFB1	YDR311W	IKI3	Q06706	1349 aa	Known RBP	2.22	□□□□□ -2.05
TFB1	YDR311W	SPT3	P06844	337 aa		2.22	□□□□□ -2.05
TFB1	YDR311W	COS2	P0CX12	379 aa		2.22	□□□□□ -2.05
TFB1	YDR311W	COS3	P0CX13	379 aa		2.22	□□□□□ -2.05
TFB1	YDR311W	SRY1	P36007	326 aa		2.22	□□□□□ -2.05
TFB1	YDR311W	HMT1	P38074	348 aa		2.22	□□□□□ -2.05
TFB1	YDR311W	COS4	P43542	379 aa		2.22	□□□□□ -2.05
TFB1	YDR311W	YLR152C	P54072	576 aa		2.22	□□□□□ -2.05
TFB1	YDR311W	FUS2	Q05670	677 aa		2.22	□□□□□ -2.05
TFB1	YDR311W	WTM1	Q12363	437 aa	Known RBP	2.22	□□□□□ -2.05
TFB1	YDR311W	YAL067W-A	Q8TGK6	75 aa		2.22	□□□□□ -2.05
TFB1	YDR311W	COX4	P04037	155 aa		2.21	□□□□□ -2.06
TFB1	YDR311W	ISY1	P21374	235 aa	Predicted RBP	2.21	□□□□□ -2.06
TFB1	YDR311W	RPB9	P27999	122 aa		2.21	□□□□□ -2.06
TFB1	YDR311W	VPH2	P32341	215 aa		2.21	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms