RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C MAL32P38158 584 aa2.68□□□□□ -1.98
RRP42YDL111C HEK2P38199 381 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
RRP42YDL111C PRE6P40303 254 aaKnown RBP2.68□□□□□ -1.98
RRP42YDL111C YIL012WP40551 113 aa2.68□□□□□ -1.98
RRP42YDL111C MAL12P53341 584 aa2.68□□□□□ -1.98
RRP42YDL111C FMP41P53889 259 aaKnown RBP2.68□□□□□ -1.98
RRP42YDL111C GIM3P53900 129 aa2.68□□□□□ -1.98
RRP42YDL111C PEX10Q05568 337 aa2.68□□□□□ -1.98
RRP42YDL111C ATG38Q05789 226 aaKnown RBP2.68□□□□□ -1.98
RRP42YDL111C SSQ1Q05931 657 aaPredicted RBP2.68□□□□□ -1.98
RRP42YDL111C COQ10Q08058 207 aa2.68□□□□□ -1.98
RRP42YDL111C RRS1Q08746 203 aaKnown RBP2.68□□□□□ -1.98
RRP42YDL111C CHD1P32657 1468 aa2.67□□□□□ -1.98
RRP42YDL111C YBR121C-AP0C5L4 52 aa2.67□□□□□ -1.98
RRP42YDL111C STE18P18852 110 aa2.67□□□□□ -1.98
RRP42YDL111C CKA2P19454 339 aa2.67□□□□□ -1.98
RRP42YDL111C DPB2P24482 689 aaPredicted RBP2.67□□□□□ -1.98
RRP42YDL111C PCL1P24867 279 aa2.67□□□□□ -1.98
RRP42YDL111C YCR102CP25608 368 aa2.67□□□□□ -1.98
RRP42YDL111C EHD3P28817 500 aa2.67□□□□□ -1.98
RRP42YDL111C DBP7P36120 742 aaKnown RBP2.67□□□□□ -1.98
RRP42YDL111C RIB1P38066 345 aa2.67□□□□□ -1.98
RRP42YDL111C YBR096WP38256 230 aa2.67□□□□□ -1.98
RRP42YDL111C MIC12P38341 106 aa2.67□□□□□ -1.98
RRP42YDL111C PHO89P38361 574 aa2.67□□□□□ -1.98
RRP42YDL111C YHL044WP38727 235 aa2.67□□□□□ -1.98
RRP42YDL111C GOS1P38736 223 aa2.67□□□□□ -1.98
RRP42YDL111C RTC3P38804 111 aaPredicted RBP2.67□□□□□ -1.98
RRP42YDL111C YGR018CP53211 109 aa2.67□□□□□ -1.98
RRP42YDL111C ZRG17P53735 605 aa2.67□□□□□ -1.98
RRP42YDL111C YMR166CQ03829 368 aa2.67□□□□□ -1.98
RRP42YDL111C YMR226CQ05016 267 aaKnown RBP2.67□□□□□ -1.98
RRP42YDL111C ADH1P00330 348 aaKnown RBP2.66□□□□□ -1.98
RRP42YDL111C CDC33P07260 213 aaKnown RBP2.66□□□□□ -1.98
RRP42YDL111C RPS19AP07280 144 aaKnown RBP2.66□□□□□ -1.98
RRP42YDL111C RPS19BP07281 144 aaPredicted RBP2.66□□□□□ -1.98
RRP42YDL111C YKR104WP0CE69 306 aa2.66□□□□□ -1.98
RRP42YDL111C YMR31P19955 123 aa2.66□□□□□ -1.98
RRP42YDL111C ERG2P32352 222 aa2.66□□□□□ -1.98
RRP42YDL111C SSO1P32867 290 aa2.66□□□□□ -1.98
RRP42YDL111C SGE1P33335 543 aa2.66□□□□□ -1.98
RRP42YDL111C PRP18P33411 251 aaPredicted RBP2.66□□□□□ -1.98
RRP42YDL111C HMT1P38074 348 aa2.66□□□□□ -1.98
RRP42YDL111C URA8P38627 578 aaPredicted RBP2.66□□□□□ -1.98
RRP42YDL111C YHL049CP38722 271 aa2.66□□□□□ -1.98
RRP42YDL111C FRT2P39734 528 aa2.66□□□□□ -1.98
RRP42YDL111C MIC26P50087 233 aa2.66□□□□□ -1.98
RRP42YDL111C AAH1P53909 347 aa2.66□□□□□ -1.98
RRP42YDL111C CTF19Q02732 369 aa2.66□□□□□ -1.98
RRP42YDL111C PLB3Q08108 686 aa2.66□□□□□ -1.98
RRP42YDL111C RPB9P27999 122 aa2.65□□□□□ -1.99
RRP42YDL111C UTH1P36135 365 aa2.65□□□□□ -1.99
RRP42YDL111C ERG28P40030 148 aa2.65□□□□□ -1.99
RRP42YDL111C SYS1P41544 203 aa2.65□□□□□ -1.99
RRP42YDL111C YFL012WP43580 148 aa2.65□□□□□ -1.99
RRP42YDL111C HAM1P47119 197 aaKnown RBP2.65□□□□□ -1.99
RRP42YDL111C RAD17P48581 401 aa2.65□□□□□ -1.99
RRP42YDL111C COQ5P49017 307 aa2.65□□□□□ -1.99
RRP42YDL111C UFD1P53044 361 aa2.65□□□□□ -1.99
RRP42YDL111C CAX4P53223 239 aa2.65□□□□□ -1.99
RRP42YDL111C CUS2P53830 285 aaPredicted RBP2.65□□□□□ -1.99
RRP42YDL111C SWT21P53873 357 aaPredicted RBP2.65□□□□□ -1.99
RRP42YDL111C RHO3Q00245 231 aaKnown RBP2.65□□□□□ -1.99
RRP42YDL111C SPG4Q04438 115 aa2.65□□□□□ -1.99
RRP42YDL111C NNT1Q05874 261 aa2.65□□□□□ -1.99
RRP42YDL111C PIN3Q06449 215 aa2.65□□□□□ -1.99
RRP42YDL111C YPR147CQ06522 304 aaKnown RBP2.65□□□□□ -1.99
RRP42YDL111C GET4Q12125 312 aa2.65□□□□□ -1.99
RRP42YDL111C YKL183C-AQ3E765 70 aa2.65□□□□□ -1.99
RRP42YDL111C AUS1Q08409 1394 aa2.64□□□□□ -1.99
RRP42YDL111C SPT3P06844 337 aa2.64□□□□□ -1.99
RRP42YDL111C BCY1P07278 416 aaKnown RBP2.64□□□□□ -1.99
RRP42YDL111C COS2P0CX12 379 aa2.64□□□□□ -1.99
RRP42YDL111C COS3P0CX13 379 aa2.64□□□□□ -1.99
RRP42YDL111C COX10P21592 462 aa2.64□□□□□ -1.99
RRP42YDL111C GDH2P33327 1092 aaKnown RBP2.64□□□□□ -1.99
RRP42YDL111C CSG2P35206 410 aa2.64□□□□□ -1.99
RRP42YDL111C DRE2P36152 348 aa2.64□□□□□ -1.99
RRP42YDL111C MRPL39P36533 70 aa2.64□□□□□ -1.99
RRP42YDL111C MRPS9P38120 278 aa2.64□□□□□ -1.99
RRP42YDL111C YHR127WP38833 243 aaKnown RBP2.64□□□□□ -1.99
RRP42YDL111C YHB1P39676 399 aaKnown RBP2.64□□□□□ -1.99
RRP42YDL111C SEO1P39709 593 aa2.64□□□□□ -1.99
RRP42YDL111C RFC4P40339 323 aaKnown RBP2.64□□□□□ -1.99
RRP42YDL111C COS4P43542 379 aa2.64□□□□□ -1.99
RRP42YDL111C RPE1P46969 238 aa2.64□□□□□ -1.99
RRP42YDL111C NSA1P53136 463 aaPredicted RBP2.64□□□□□ -1.99
RRP42YDL111C MRH4P53166 561 aa2.64□□□□□ -1.99
RRP42YDL111C YGR067CP53243 804 aa2.64□□□□□ -1.99
RRP42YDL111C RRP40Q08285 240 aaKnown RBP2.64□□□□□ -1.99
RRP42YDL111C TIR4Q12218 487 aaPredicted RBP2.64□□□□□ -1.99
RRP42YDL111C FUS3P16892 353 aaKnown RBP2.63□□□□□ -1.99
RRP42YDL111C CDC10P25342 322 aaKnown RBP2.63□□□□□ -1.99
RRP42YDL111C MGM101P32787 269 aaKnown RBP2.63□□□□□ -1.99
RRP42YDL111C NTF2P33331 125 aaKnown RBP2.63□□□□□ -1.99
RRP42YDL111C CBT1P36038 271 aaPredicted RBP2.63□□□□□ -1.99
RRP42YDL111C BDH1P39714 382 aa2.63□□□□□ -1.99
RRP42YDL111C SNZ3P43545 298 aa2.63□□□□□ -1.99
RRP42YDL111C CPR7P47103 393 aa2.63□□□□□ -1.99
RRP42YDL111C MCM22P47167 239 aa2.63□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms