RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	ECM14	P38836	430 aa		6.14	□□□□□ -1.43
UBP13	YBL067C	EPT1	P22140	391 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	MRPL9	P31334	269 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	TIR2	P33890	251 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	MRPL17	P36528	281 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	PCL5	P38794	229 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	PET8	P38921	284 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	SWC4	P53201	476 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	SEI1	Q06058	285 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	YPR098C	Q06089	161 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	YLR049C	Q12110	428 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	RFM1	Q12192	310 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	STH1	P32597	1359 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	SPC34	P36131	295 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	GEP4	P38812	185 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	EXO1	P39875	702 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	EGT2	P42835	1041 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	HNT1	Q04344	158 aa	Known RBP	6.13	□□□□□ -1.43
UBP13	YBL067C	DTD1	Q07648	150 aa	Known RBP	6.13	□□□□□ -1.43
UBP13	YBL067C	YOL024W	Q08172	172 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	YLR046C	Q12253	270 aa		6.13	□□□□□ -1.43
UBP13	YBL067C	CDC8	P00572	216 aa		6.12	□□□□□ -1.43
UBP13	YBL067C	CPR7	P47103	393 aa		6.12	□□□□□ -1.43
UBP13	YBL067C	MCM22	P47167	239 aa		6.12	□□□□□ -1.43
UBP13	YBL067C	BNA5	Q05979	453 aa		6.12	□□□□□ -1.43
UBP13	YBL067C	SUR7	P54003	302 aa		6.11	□□□□□ -1.43
UBP13	YBL067C	ELP3	Q02908	557 aa	Known RBP	6.11	□□□□□ -1.43
UBP13	YBL067C	YMR010W	Q03687	405 aa		6.11	□□□□□ -1.43
UBP13	YBL067C	FRQ1	Q06389	190 aa		6.11	□□□□□ -1.43
UBP13	YBL067C	RRS1	Q08746	203 aa	Known RBP	6.11	□□□□□ -1.43
UBP13	YBL067C	CDC28	P00546	298 aa	Known RBP	6.11	□□□□□ -1.43
UBP13	YBL067C	YMC2	P38087	329 aa		6.11	□□□□□ -1.43
UBP13	YBL067C	JJJ3	P47138	172 aa		6.11	□□□□□ -1.43
UBP13	YBL067C	ACT1	P60010	375 aa	Known RBP	6.11	□□□□□ -1.43
UBP13	YBL067C	BCH1	Q05029	724 aa		6.11	□□□□□ -1.43
UBP13	YBL067C	THP3	Q12049	470 aa	Known RBP	6.11	□□□□□ -1.43
UBP13	YBL067C	MCT1	Q12283	360 aa		6.11	□□□□□ -1.43
UBP13	YBL067C	YPR064W	Q12492	139 aa		6.11	□□□□□ -1.43
UBP13	YBL067C	POM152	P39685	1337 aa		6.1	□□□□□ -1.43
UBP13	YBL067C	MRPS28	P21771	286 aa		6.1	□□□□□ -1.43
UBP13	YBL067C	FRE2	P36033	711 aa		6.1	□□□□□ -1.43
UBP13	YBL067C	RRG9	P40156	214 aa		6.1	□□□□□ -1.43
UBP13	YBL067C	COQ5	P49017	307 aa		6.1	□□□□□ -1.43
UBP13	YBL067C	AAT1	Q01802	451 aa		6.1	□□□□□ -1.43
UBP13	YBL067C	RSC9	Q03124	581 aa		6.1	□□□□□ -1.43
UBP13	YBL067C	PEX30	Q06169	523 aa		6.1	□□□□□ -1.43
UBP13	YBL067C	SNU23	Q12368	194 aa	Predicted RBP	6.1	□□□□□ -1.43
UBP13	YBL067C	RPS1B	P23248	255 aa	Known RBP	6.1	□□□□□ -1.43
UBP13	YBL067C	FUN26	P31381	517 aa		6.1	□□□□□ -1.43
UBP13	YBL067C	KAR9	P32526	644 aa		6.1	□□□□□ -1.43
UBP13	YBL067C	RIM2	P38127	377 aa		6.1	□□□□□ -1.43
UBP13	YBL067C	BAT1	P38891	393 aa	Known RBP	6.1	□□□□□ -1.43
UBP13	YBL067C	XBP1	P40489	647 aa		6.1	□□□□□ -1.43
UBP13	YBL067C	YIA6	P40556	373 aa		6.1	□□□□□ -1.43
UBP13	YBL067C	ARL3	Q02804	198 aa		6.1	□□□□□ -1.43
UBP13	YBL067C	YAP7	Q08182	245 aa		6.1	□□□□□ -1.43
UBP13	YBL067C	MON2	P48563	1636 aa	Predicted RBP	6.09	□□□□□ -1.43
UBP13	YBL067C	COX5A	P00424	153 aa		6.09	□□□□□ -1.43
UBP13	YBL067C	RRP3	P38712	501 aa	Known RBP	6.09	□□□□□ -1.43
UBP13	YBL067C	YDL199C	Q12407	687 aa		6.09	□□□□□ -1.43
UBP13	YBL067C	YKL068W-A	Q3E826	78 aa		6.09	□□□□□ -1.43
UBP13	YBL067C	IGO2	Q9P305	131 aa		6.09	□□□□□ -1.43
UBP13	YBL067C	YOR304C-A	O14468	76 aa		6.09	□□□□□ -1.44
UBP13	YBL067C	YCR007C	P25354	239 aa		6.09	□□□□□ -1.44
UBP13	YBL067C	TRX3	P25372	127 aa		6.09	□□□□□ -1.44
UBP13	YBL067C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	6.09	□□□□□ -1.44	not detected
UBP13	YBL067C	MST28	P39552	234 aa		6.09	□□□□□ -1.44
UBP13	YBL067C	AZF1	P41696	914 aa		6.09	□□□□□ -1.44
UBP13	YBL067C	HST4	P53688	370 aa		6.09	□□□□□ -1.44
UBP13	YBL067C	MSA1	Q08471	629 aa		6.09	□□□□□ -1.44
UBP13	YBL067C	PDC2	P32896	925 aa		6.08	□□□□□ -1.44
UBP13	YBL067C	EFM1	P38732	585 aa		6.08	□□□□□ -1.44
UBP13	YBL067C	YMR144W	P40214	342 aa	Known RBP	6.08	□□□□□ -1.44
UBP13	YBL067C	HCH1	P53834	153 aa		6.08	□□□□□ -1.44
UBP13	YBL067C	YNL184C	P53876	108 aa		6.08	□□□□□ -1.44
UBP13	YBL067C	IMP4	P53941	290 aa	Known RBP	6.08	□□□□□ -1.44
UBP13	YBL067C	RHO3	Q00245	231 aa	Known RBP	6.08	□□□□□ -1.44
UBP13	YBL067C	ATG15	P25641	520 aa		6.07	□□□□□ -1.44
UBP13	YBL067C	UBP5	P39944	805 aa		6.07	□□□□□ -1.44
UBP13	YBL067C	YER186C	P40101	306 aa		6.07	□□□□□ -1.44
UBP13	YBL067C	UBC7	Q02159	165 aa		6.07	□□□□□ -1.44
UBP13	YBL067C	BET5	Q03630	159 aa		6.07	□□□□□ -1.44
UBP13	YBL067C	FRE8	Q12209	686 aa		6.07	□□□□□ -1.44
UBP13	YBL067C	FCY2	P17064	533 aa		6.07	□□□□□ -1.44
UBP13	YBL067C	SUI1	P32911	108 aa	Known RBP	6.07	□□□□□ -1.44
UBP13	YBL067C	KAE1	P36132	386 aa		6.07	□□□□□ -1.44
UBP13	YBL067C	YIL169C	P40442	995 aa		6.07	□□□□□ -1.44
UBP13	YBL067C	PSA1	P41940	361 aa	Known RBP	6.07	□□□□□ -1.44
UBP13	YBL067C	YGR035C	P53222	116 aa		6.07	□□□□□ -1.44
UBP13	YBL067C	ATP23	P53722	227 aa		6.07	□□□□□ -1.44
UBP13	YBL067C	PST2	Q12335	198 aa	Known RBP	6.07	□□□□□ -1.44
UBP13	YBL067C	EDE1	P34216	1381 aa		6.07	□□□□□ -1.44
UBP13	YBL067C	SEC4	P07560	215 aa	Known RBP	6.06	□□□□□ -1.44
UBP13	YBL067C	GCN3	P14741	305 aa		6.06	□□□□□ -1.44
UBP13	YBL067C	SCL1	P21243	252 aa	Known RBP	6.06	□□□□□ -1.44
UBP13	YBL067C	FMP23	P38231	175 aa		6.06	□□□□□ -1.44
UBP13	YBL067C	ARC40	P38328	384 aa	Known RBP	6.06	□□□□□ -1.44
UBP13	YBL067C	TRR2	P38816	342 aa		6.06	□□□□□ -1.44
UBP13	YBL067C	YHR127W	P38833	243 aa	Known RBP	6.06	□□□□□ -1.44
UBP13	YBL067C	PKR1	Q03880	122 aa	Known RBP	6.06	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms