RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 TMEM173Q86WV6 379 aaPredicted RBP21.98■■□□□ 1.11
SSBP4-210ENST00000601444 MAP4K3Q8IVH8 894 aa21.98■■□□□ 1.11
SSBP4-210ENST00000601444 THNSL1Q8IYQ7 743 aa21.98■■□□□ 1.11
SSBP4-210ENST00000601444 OLFML3Q9NRN5 406 aa21.98■■□□□ 1.11
SSBP4-210ENST00000601444 KANSL3Q9P2N6 904 aa21.98■■□□□ 1.11
SSBP4-210ENST00000601444 PTGESO14684 152 aa21.97■■□□□ 1.11
SSBP4-210ENST00000601444 HNRNPDLO14979 420 aaKnown RBP21.97■■□□□ 1.11
SSBP4-210ENST00000601444 CLDN3O15551 220 aa21.97■■□□□ 1.11
SSBP4-210ENST00000601444 MEFVO15553 781 aaPredicted RBP21.97■■□□□ 1.11
SSBP4-210ENST00000601444 PIGRP01833 764 aa21.97■■□□□ 1.11
SSBP4-210ENST00000601444 GALTP07902 379 aa21.97■■□□□ 1.11
SSBP4-210ENST00000601444 GRM5P41594 1212 aa21.97■■□□□ 1.11
SSBP4-210ENST00000601444 SLC11A1P49279 550 aa21.97■■□□□ 1.11
SSBP4-210ENST00000601444 LIG4P49917 911 aa21.97■■□□□ 1.11
SSBP4-210ENST00000601444 SLC39A11Q8N1S5 342 aa21.97■■□□□ 1.11
SSBP4-210ENST00000601444 SLC17A8Q8NDX2 589 aa21.97■■□□□ 1.11
SSBP4-210ENST00000601444 POF1BQ8WVV4 589 aa21.97■■□□□ 1.11
SSBP4-210ENST00000601444 RSPH1Q8WYR4 309 aa21.97■■□□□ 1.11
SSBP4-210ENST00000601444 MRPL38Q96DV4 380 aaKnown RBP21.97■■□□□ 1.11
SSBP4-210ENST00000601444 ZNF202O95125 648 aa21.96■■□□□ 1.11
SSBP4-210ENST00000601444 SCP2P22307 547 aa21.96■■□□□ 1.11
SSBP4-210ENST00000601444 MATR3P43243 847 aaKnown RBP eCLIP21.96■■□□□ 1.11
SSBP4-210ENST00000601444 ALDH7A1P49419 539 aaKnown RBP21.96■■□□□ 1.11
SSBP4-210ENST00000601444 MCL1Q07820 350 aa21.96■■□□□ 1.11
SSBP4-210ENST00000601444 NOLC1Q14978 699 aaKnown RBP eCLIP21.96■■□□□ 1.11
SSBP4-210ENST00000601444 BCL7CQ8WUZ0 217 aaPredicted RBP21.96■■□□□ 1.11
SSBP4-210ENST00000601444 FAM193BQ96PV7 902 aaPredicted RBP21.96■■□□□ 1.11
SSBP4-210ENST00000601444 SPG21Q9NZD8 308 aa21.96■■□□□ 1.11
SSBP4-210ENST00000601444 LMCD1Q9NZU5 365 aa21.96■■□□□ 1.11
SSBP4-210ENST00000601444 CACNG4Q9UBN1 327 aa21.96■■□□□ 1.11
SSBP4-210ENST00000601444 USP25Q9UHP3 1055 aa21.96■■□□□ 1.11
SSBP4-210ENST00000601444 PCDHGC5Q9Y5F6 944 aa21.96■■□□□ 1.11
SSBP4-210ENST00000601444 MYO9BQ13459 2157 aa21.95■■□□□ 1.1
SSBP4-210ENST00000601444 GOLGA6L4A6NEF3 574 aa21.95■■□□□ 1.1
SSBP4-210ENST00000601444 PRPF6O94906 941 aaKnown RBP21.95■■□□□ 1.1
SSBP4-210ENST00000601444 PRR29P0C7W0 189 aa21.95■■□□□ 1.1
SSBP4-210ENST00000601444 IRS1P35568 1242 aa21.95■■□□□ 1.1
SSBP4-210ENST00000601444 EHHADHQ08426 723 aa21.95■■□□□ 1.1
SSBP4-210ENST00000601444 GLRA4Q5JXX5 417 aa21.95■■□□□ 1.1
SSBP4-210ENST00000601444 ZBTB41Q5SVQ8 909 aa21.95■■□□□ 1.1
SSBP4-210ENST00000601444 L1TD1Q5T7N2 865 aaKnown RBP21.95■■□□□ 1.1
SSBP4-210ENST00000601444 KRBA2Q6ZNG9 492 aa21.95■■□□□ 1.1
SSBP4-210ENST00000601444 UNC13DQ70J99 1090 aa21.95■■□□□ 1.1
SSBP4-210ENST00000601444 APBB1IPQ7Z5R6 666 aaPredicted RBP21.95■■□□□ 1.1
SSBP4-210ENST00000601444 COLGALT2Q8IYK4 626 aa21.95■■□□□ 1.1
SSBP4-210ENST00000601444 RPS6KC1Q96S38 1066 aa21.95■■□□□ 1.1
SSBP4-210ENST00000601444 F8W810 466 aa21.94■■□□□ 1.1
SSBP4-210ENST00000601444 NRP1O14786 923 aa21.94■■□□□ 1.1
SSBP4-210ENST00000601444 KLRC4O43908 158 aa21.94■■□□□ 1.1
SSBP4-210ENST00000601444 GADD45BO75293 160 aaPredicted RBP21.94■■□□□ 1.1
SSBP4-210ENST00000601444 PLCB3Q01970 1234 aa21.94■■□□□ 1.1
SSBP4-210ENST00000601444 DSC1Q08554 894 aa21.94■■□□□ 1.1
SSBP4-210ENST00000601444 PTPROQ16827 1216 aa21.94■■□□□ 1.1
SSBP4-210ENST00000601444 CSPP1Q1MSJ5 1256 aa21.94■■□□□ 1.1
SSBP4-210ENST00000601444 FMR1NBQ8N0W7 255 aaPredicted RBP21.94■■□□□ 1.1
SSBP4-210ENST00000601444 RABGGTAQ92696 567 aa21.94■■□□□ 1.1
SSBP4-210ENST00000601444 HVCN1Q96D96 273 aa21.94■■□□□ 1.1
SSBP4-210ENST00000601444 ACAP3Q96P50 834 aa21.94■■□□□ 1.1
SSBP4-210ENST00000601444 CCDC94Q9BW85 323 aaPredicted RBP21.94■■□□□ 1.1
SSBP4-210ENST00000601444 PCDHB13Q9Y5F0 798 aa21.94■■□□□ 1.1
SSBP4-210ENST00000601444 PLXNA4Q9HCM2 1894 aa21.94■■□□□ 1.1
SSBP4-210ENST00000601444 A0A0B4J269 797 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 ALDH2P05091 517 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 ABCD1P33897 745 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 TNFSF9P41273 254 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 OR1G1P47890 313 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 ERVFC1P60507 584 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 GRIK3Q13003 919 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 SNW1Q13573 536 aaKnown RBP21.93■■□□□ 1.1
SSBP4-210ENST00000601444 NAB2Q15742 525 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 FAM26FQ5R3K3 315 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 ALKAL1Q6UXT8 129 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 ENGASEQ8NFI3 743 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 PRUNE2Q8WUY3 3088 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 IGSF21Q96ID5 467 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 IPO9Q96P70 1041 aaKnown RBP21.93■■□□□ 1.1
SSBP4-210ENST00000601444 ACCSQ96QU6 501 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 PAAF1Q9BRP4 392 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 LMAN2LQ9H0V9 348 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 PRDM6Q9NQX0 595 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 FAN1Q9Y2M0 1017 aa21.93■■□□□ 1.1
SSBP4-210ENST00000601444 ZMYM2Q9UBW7 1377 aa21.92■■□□□ 1.1
SSBP4-210ENST00000601444 PVALEFA0A1B0GWK0 134 aa21.92■■□□□ 1.1
SSBP4-210ENST00000601444 FAM189A1O60320 539 aa21.92■■□□□ 1.1
SSBP4-210ENST00000601444 ADSSP30520 456 aa21.92■■□□□ 1.1
SSBP4-210ENST00000601444 HOXD13P35453 343 aa21.92■■□□□ 1.1
SSBP4-210ENST00000601444 PPM1AP35813 382 aa21.92■■□□□ 1.1
SSBP4-210ENST00000601444 YARSP54577 528 aaKnown RBP21.92■■□□□ 1.1
SSBP4-210ENST00000601444 SLC10A6Q3KNW5 377 aa21.92■■□□□ 1.1
SSBP4-210ENST00000601444 EPM2AIP1Q7L775 607 aaPredicted RBP21.92■■□□□ 1.1
SSBP4-210ENST00000601444 ZMAT2Q96NC0 199 aaKnown RBP21.92■■□□□ 1.1
SSBP4-210ENST00000601444 TMEM175Q9BSA9 504 aa21.92■■□□□ 1.1
SSBP4-210ENST00000601444 MSTO1Q9BUK6 570 aa21.92■■□□□ 1.1
SSBP4-210ENST00000601444 SLC39A2Q9NP94 309 aa21.92■■□□□ 1.1
SSBP4-210ENST00000601444 MARCH5Q9NX47 278 aa21.92■■□□□ 1.1
SSBP4-210ENST00000601444 PRG3Q9Y2Y8 225 aaPredicted RBP21.92■■□□□ 1.1
SSBP4-210ENST00000601444 SMIM28A0A1B0GU29 152 aa21.91■■□□□ 1.1
SSBP4-210ENST00000601444 CASTOR2A6NHX0 329 aa21.91■■□□□ 1.1
SSBP4-210ENST00000601444 THP07101 528 aa21.91■■□□□ 1.1
SSBP4-210ENST00000601444 KRT17Q04695 432 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms