RNA–Protein interactions for RNA: ENST00000548225.1

RNF41-205, Transcript of ring finger protein 41, humanhuman

TSL 5

Gene RNF41, Length 1,001 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-205ENST00000548225 FAM50BQ9Y247 325 aa16.66■□□□□ 0.26
RNF41-205ENST00000548225 PCDHGC5Q9Y5F6 944 aa16.66■□□□□ 0.26
RNF41-205ENST00000548225 ATP6V1DQ9Y5K8 247 aa16.66■□□□□ 0.26
RNF41-205ENST00000548225 IRAK3Q9Y616 596 aa16.66■□□□□ 0.26
RNF41-205ENST00000548225 BRWD1Q9NSI6 2320 aa16.65■□□□□ 0.26
RNF41-205ENST00000548225 DLL1O00548 723 aa16.65■□□□□ 0.26
RNF41-205ENST00000548225 ABLIM1O14639 778 aa16.65■□□□□ 0.26
RNF41-205ENST00000548225 THP07101 528 aa16.65■□□□□ 0.26
RNF41-205ENST00000548225 GTF2F1P35269 517 aaKnown RBP eCLIP16.65■□□□□ 0.26
RNF41-205ENST00000548225 LTBRP36941 435 aa16.65■□□□□ 0.26
RNF41-205ENST00000548225 NDUFV1P49821 464 aa16.65■□□□□ 0.26
RNF41-205ENST00000548225 YARSP54577 528 aaKnown RBP16.65■□□□□ 0.26
RNF41-205ENST00000548225 DNM1Q05193 864 aaKnown RBP16.65■□□□□ 0.26
RNF41-205ENST00000548225 TUSC3Q13454 348 aa16.65■□□□□ 0.26
RNF41-205ENST00000548225 NOLC1Q14978 699 aaKnown RBP eCLIP16.65■□□□□ 0.26
RNF41-205ENST00000548225 FOXD4L6Q3SYB3 417 aaPredicted RBP16.65■□□□□ 0.26
RNF41-205ENST00000548225 FOXD4L3Q6VB84 417 aaPredicted RBP16.65■□□□□ 0.26
RNF41-205ENST00000548225 EP400NLQ6ZTU2 488 aa16.65■□□□□ 0.26
RNF41-205ENST00000548225 RBM23Q86U06 439 aaKnown RBP16.65■□□□□ 0.26
RNF41-205ENST00000548225 ADAMTS19Q8TE59 1207 aa16.65■□□□□ 0.26
RNF41-205ENST00000548225 LRRC27Q9C0I9 530 aa16.65■□□□□ 0.26
RNF41-205ENST00000548225 TNMDQ9H2S6 317 aa16.65■□□□□ 0.26
RNF41-205ENST00000548225 MARCH5Q9NX47 278 aa16.65■□□□□ 0.26
RNF41-205ENST00000548225 TBX20Q9UMR3 447 aa16.65■□□□□ 0.26
RNF41-205ENST00000548225 GDAQ9Y2T3 454 aa16.65■□□□□ 0.26
RNF41-205ENST00000548225 PRG3Q9Y2Y8 225 aaPredicted RBP16.65■□□□□ 0.26
RNF41-205ENST00000548225 A0A087X0B3 334 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 C2orf71A6NGG8 1288 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 MYMKA6NI61 221 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 HIDE1A8MVS5 230 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 H3BQ06 376 aaPredicted RBP16.64■□□□□ 0.25
RNF41-205ENST00000548225 PTGESO14684 152 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 CLDN3O15551 220 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 TBX10O75333 385 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 PIGRP01833 764 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 GAP43P17677 238 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 ME1P48163 572 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 GTF2BQ00403 316 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 MCL1Q07820 350 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 KYAT1Q16773 422 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 AXDND1Q5T1B0 1012 aaPredicted RBP16.64■□□□□ 0.25
RNF41-205ENST00000548225 SHC4Q6S5L8 630 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 DYMQ7RTS9 669 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 PDILTQ8N807 584 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 IQUBQ8NA54 791 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.64■□□□□ 0.25
RNF41-205ENST00000548225 HVCN1Q96D96 273 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 BICD1Q96G01 975 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 FIZ1Q96SL8 496 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 PYM1Q9BRP8 204 aaKnown RBP16.64■□□□□ 0.25
RNF41-205ENST00000548225 MAGEF1Q9HAY2 307 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 ANKFY1Q9P2R3 1169 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 RCOR1Q9UKL0 485 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 SSX2IPQ9Y2D8 614 aa16.64■□□□□ 0.25
RNF41-205ENST00000548225 SPTBN5Q9NRC6 3674 aaKnown RBP16.64■□□□□ 0.25
RNF41-205ENST00000548225 XIRP2A4UGR9 3374 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 HNRNPDLO14979 420 aaKnown RBP16.63■□□□□ 0.25
RNF41-205ENST00000548225 PER2O15055 1255 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 LINC01565O15544 149 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 CXCL14O95715 111 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 GLP2RO95838 553 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 SOD2P04179 222 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 LIG4P49917 911 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 KRT85P78386 507 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 E2F4Q16254 413 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 XKR4Q5GH76 650 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 PTCRAQ6ISU1 281 aaPredicted RBP16.63■□□□□ 0.25
RNF41-205ENST00000548225 TMEM184AQ6ZMB5 413 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 ZBTB33Q86T24 672 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 RNF168Q8IYW5 571 aaPredicted RBP16.63■□□□□ 0.25
RNF41-205ENST00000548225 CEP120Q8N960 986 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 DNAJC19Q96DA6 116 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 ACAP3Q96P50 834 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 UHRF1Q96T88 793 aaPredicted RBP16.63■□□□□ 0.25
RNF41-205ENST00000548225 HERC2P3Q9BVR0 1158 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 VN1R3Q9BXE9 311 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 PANK2Q9BZ23 570 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 FAM13BQ9NYF5 915 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 PCDHA7Q9UN72 937 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 ZDHHC9Q9Y397 364 aa16.63■□□□□ 0.25
RNF41-205ENST00000548225 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.62■□□□□ 0.25
RNF41-205ENST00000548225 FRMD3A2A2Y4 597 aa16.62■□□□□ 0.25
RNF41-205ENST00000548225 GRXCR2A6NFK2 248 aa16.62■□□□□ 0.25
RNF41-205ENST00000548225 EFEMP2O95967 443 aa16.62■□□□□ 0.25
RNF41-205ENST00000548225 URODP06132 367 aa16.62■□□□□ 0.25
RNF41-205ENST00000548225 AMPD3Q01432 767 aa16.62■□□□□ 0.25
RNF41-205ENST00000548225 DLX2Q07687 328 aaPredicted RBP16.62■□□□□ 0.25
RNF41-205ENST00000548225 COASYQ13057 564 aa16.62■□□□□ 0.25
RNF41-205ENST00000548225 SMAD4Q13485 552 aaKnown RBP16.62■□□□□ 0.25
RNF41-205ENST00000548225 KCNC3Q14003 757 aa16.62■□□□□ 0.25
RNF41-205ENST00000548225 HSP90AA2PQ14568 343 aaPredicted RBP16.62■□□□□ 0.25
RNF41-205ENST00000548225 PTPN14Q15678 1187 aa16.62■□□□□ 0.25
RNF41-205ENST00000548225 NAB2Q15742 525 aa16.62■□□□□ 0.25
RNF41-205ENST00000548225 ALKAL1Q6UXT8 129 aa16.62■□□□□ 0.25
RNF41-205ENST00000548225 SFR1Q86XK3 245 aa16.62■□□□□ 0.25
RNF41-205ENST00000548225 MAP4K3Q8IVH8 894 aa16.62■□□□□ 0.25
RNF41-205ENST00000548225 GPR65Q8IYL9 337 aa16.62■□□□□ 0.25
RNF41-205ENST00000548225 TMEM87AQ8NBN3 555 aa16.62■□□□□ 0.25
RNF41-205ENST00000548225 MSLNLQ96KJ4 702 aa16.62■□□□□ 0.25
RNF41-205ENST00000548225 SNX27Q96L92 541 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms