RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 APE4P38821 490 aa2.07□□□□□ -2.08
snR78snR78 YLR297WQ05899 129 aa2.07□□□□□ -2.08
snR78snR78 SIA1Q12212 622 aa2.07□□□□□ -2.08
snR78snR78 RPL5P26321 297 aaKnown RBP2.06□□□□□ -2.08
snR78snR78 CSG2P35206 410 aa2.06□□□□□ -2.08
snR78snR78 ARN2P38724 620 aa2.06□□□□□ -2.08
snR78snR78 TAF9Q05027 157 aa2.06□□□□□ -2.08
snR78snR78 ASR1Q06834 288 aa2.06□□□□□ -2.08
snR78snR78 YMR316C-AI2HB70 103 aa2.05□□□□□ -2.08
snR78snR78 FMP41P53889 259 aaKnown RBP2.05□□□□□ -2.08
snR78snR78 YIA6P40556 373 aa2.04□□□□□ -2.08
snR78snR78 VPS60Q03390 229 aa2.04□□□□□ -2.08
snR78snR78 DPB2P24482 689 aaPredicted RBP2.03□□□□□ -2.08
snR78snR78 PET18P25362 215 aa2.03□□□□□ -2.08
snR78snR78 YDR089WP38966 869 aa2.03□□□□□ -2.08
snR78snR78 TIF34P40217 347 aaKnown RBP2.03□□□□□ -2.08
snR78snR78 YJL118WP47022 219 aa2.03□□□□□ -2.08
snR78snR78 GTO1P48239 356 aa2.03□□□□□ -2.08
snR78snR78 BOL1Q3E793 110 aa2.03□□□□□ -2.08
snR78snR78 PET494P07390 489 aaPredicted RBP2.02□□□□□ -2.09
snR78snR78 SFC1P33303 322 aa2.02□□□□□ -2.09
snR78snR78 SSO2P39926 295 aa2.02□□□□□ -2.09
snR78snR78 RIB4P50861 169 aaPredicted RBP2.02□□□□□ -2.09
snR78snR78 CAM1P29547 415 aaKnown RBP2.01□□□□□ -2.09
snR78snR78 HMT1P38074 348 aa2.01□□□□□ -2.09
snR78snR78 TAD2P47058 250 aa2.01□□□□□ -2.09
snR78snR78 VPS20Q04272 221 aa2.01□□□□□ -2.09
snR78snR78 POM33Q12164 279 aa2.01□□□□□ -2.09
snR78snR78 YPL247CQ12523 523 aa2.01□□□□□ -2.09
snR78snR78 DOA4P32571 926 aa2□□□□□ -2.09
snR78snR78 TDA11P38854 504 aa2□□□□□ -2.09
snR78snR78 RPL10P41805 221 aaKnown RBP2□□□□□ -2.09
snR78snR78 LOH1P47055 219 aa2□□□□□ -2.09
snR78snR78 NIF3P53081 288 aa2□□□□□ -2.09
snR78snR78 DBP6P53734 629 aaKnown RBP2□□□□□ -2.09
snR78snR78 SMT3Q12306 101 aaKnown RBP2□□□□□ -2.09
snR78snR78 ATP6P00854 259 aa1.99□□□□□ -2.09
snR78snR78 GDH2P33327 1092 aaKnown RBP1.99□□□□□ -2.09
snR78snR78 CDC40P40968 455 aaPredicted RBP1.99□□□□□ -2.09
snR78snR78 SPT7P35177 1332 aa1.98□□□□□ -2.09
snR78snR78 AYR1P40471 297 aa1.98□□□□□ -2.09
snR78snR78 SAR1P20606 190 aaKnown RBP1.97□□□□□ -2.09
snR78snR78 SCM4P32564 187 aa1.97□□□□□ -2.09
snR78snR78 VOA1P53262 265 aa1.97□□□□□ -2.09
snR78snR78 SDC1Q03323 175 aa1.97□□□□□ -2.09
snR78snR78 PEX12Q04370 399 aa1.97□□□□□ -2.09
snR78snR78 LOA1Q06508 300 aa1.97□□□□□ -2.09
snR78snR78 GEP5Q12393 293 aa1.97□□□□□ -2.09
snR78snR78 RNP1P32385 249 aa1.96□□□□□ -2.1
snR78snR78 DRE2P36152 348 aa1.96□□□□□ -2.1
snR78snR78 TEM1P38987 245 aa1.96□□□□□ -2.1
snR78snR78 AGP3P43548 558 aa1.96□□□□□ -2.1
snR78snR78 GPN3Q06543 272 aa1.96□□□□□ -2.1
snR78snR78 ILV1P00927 576 aaKnown RBP1.95□□□□□ -2.1
snR78snR78 RAD3P06839 778 aa1.95□□□□□ -2.1
snR78snR78 PUT1P09368 476 aa1.95□□□□□ -2.1
snR78snR78 SWI3P32591 825 aa1.95□□□□□ -2.1
snR78snR78 IBA57P47158 497 aa1.95□□□□□ -2.1
snR78snR78 KEL2P50090 882 aa1.94□□□□□ -2.1
snR78snR78 MDM34P53083 459 aa1.94□□□□□ -2.1
snR78snR78 PST1Q12355 444 aa1.94□□□□□ -2.1
snR78snR78 YJL028WP47062 111 aa1.93□□□□□ -2.1
snR78snR78 ABZ2Q03266 374 aa1.93□□□□□ -2.1
snR78snR78 SAS5Q99314 248 aa1.93□□□□□ -2.1
snR78snR78 PPH21P23594 369 aa1.92□□□□□ -2.1
snR78snR78 ICL1P28240 557 aaPredicted RBP1.92□□□□□ -2.1
snR78snR78 MAL32P38158 584 aa1.92□□□□□ -2.1
snR78snR78 NPT1P39683 429 aaKnown RBP1.92□□□□□ -2.1
snR78snR78 AGX1P43567 385 aa1.92□□□□□ -2.1
snR78snR78 SNX4P47057 423 aa1.92□□□□□ -2.1
snR78snR78 MAL12P53341 584 aa1.92□□□□□ -2.1
snR78snR78 BER1Q06688 274 aaKnown RBP1.92□□□□□ -2.1
snR78snR78 YAL064W-BO13512 126 aa1.91□□□□□ -2.1
snR78snR78 COS2P0CX12 379 aa1.91□□□□□ -2.1
snR78snR78 COS3P0CX13 379 aa1.91□□□□□ -2.1
snR78snR78 RPC25P35718 212 aa1.91□□□□□ -2.1
snR78snR78 PEX31P53203 462 aa1.91□□□□□ -2.1
snR78snR78 RRG8Q06109 277 aa1.91□□□□□ -2.1
snR78snR78 VAC14Q06708 880 aa1.91□□□□□ -2.1
snR78snR78 RPS3P05750 240 aaKnown RBP1.9□□□□□ -2.11
snR78snR78 GPI12P23797 304 aa1.9□□□□□ -2.11
snR78snR78 YDR286CQ05530 114 aa1.9□□□□□ -2.11
snR78snR78 BOP2Q06150 570 aa1.9□□□□□ -2.11
snR78snR78 MHT1Q12525 324 aa1.9□□□□□ -2.11
snR78snR78 PEX3P28795 441 aa1.89□□□□□ -2.11
snR78snR78 HIS2P38635 335 aa1.89□□□□□ -2.11
snR78snR78 MGR3Q04472 501 aa1.89□□□□□ -2.11
snR78snR78 SEC10Q06245 871 aa1.89□□□□□ -2.11
snR78snR78 CSM1P25651 190 aa1.88□□□□□ -2.11
snR78snR78 CUR1Q06469 252 aa1.88□□□□□ -2.11
snR78snR78 SLD7Q08457 257 aa1.88□□□□□ -2.11
snR78snR78 PGC1Q08959 321 aa1.88□□□□□ -2.11
snR78snR78 BLI1P35727 113 aa1.87□□□□□ -2.11
snR78snR78 CPD1P53314 239 aa1.87□□□□□ -2.11
snR78snR78 RPL4AP10664 362 aaKnown RBP1.86□□□□□ -2.11
snR78snR78 GCD2P12754 651 aaPredicted RBP1.86□□□□□ -2.11
snR78snR78 CCA1P21269 546 aa1.86□□□□□ -2.11
snR78snR78 TRX1P22217 103 aaKnown RBP1.86□□□□□ -2.11
snR78snR78 SKI2P35207 1287 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
snR78snR78 PEP8P40335 379 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 164 ms