RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W RRP17Q04031 235 aaPredicted RBP3.39□□□□□ -1.87
ROD1YOR018W MRPL35Q06678 367 aa3.39□□□□□ -1.87
ROD1YOR018W MIM1Q08176 113 aa3.39□□□□□ -1.87
ROD1YOR018W ATG41Q12048 136 aa3.39□□□□□ -1.87
ROD1YOR018W YOL114CQ12322 202 aa3.39□□□□□ -1.87
ROD1YOR018W YPR1Q12458 312 aa3.39□□□□□ -1.87
ROD1YOR018W NUP1P20676 1076 aa3.39□□□□□ -1.87
ROD1YOR018W TRS65P32893 560 aa3.39□□□□□ -1.87
ROD1YOR018W SUR1P33300 382 aa3.39□□□□□ -1.87
ROD1YOR018W NIC96P34077 839 aa3.39□□□□□ -1.87
ROD1YOR018W GPX1P36014 167 aa3.39□□□□□ -1.87
ROD1YOR018W RSM22P36056 628 aa3.39□□□□□ -1.87
ROD1YOR018W AIM3P38266 947 aaKnown RBP3.39□□□□□ -1.87
ROD1YOR018W PTC7P38797 343 aa3.39□□□□□ -1.87
ROD1YOR018W SER3P40054 469 aa3.39□□□□□ -1.87
ROD1YOR018W PKP1P40530 394 aa3.39□□□□□ -1.87
ROD1YOR018W MSY1P48527 492 aa3.39□□□□□ -1.87
ROD1YOR018W DOC1P53068 250 aa3.39□□□□□ -1.87
ROD1YOR018W PLB2Q03674 706 aa3.39□□□□□ -1.87
ROD1YOR018W MRPL1Q04599 285 aa3.39□□□□□ -1.87
ROD1YOR018W UTP21Q06078 939 aaPredicted RBP3.39□□□□□ -1.87
ROD1YOR018W YPR147CQ06522 304 aaKnown RBP3.39□□□□□ -1.87
ROD1YOR018W HEM25Q07534 307 aa3.39□□□□□ -1.87
ROD1YOR018W AIM6Q07716 390 aa3.39□□□□□ -1.87
ROD1YOR018W IRC19Q07843 230 aa3.39□□□□□ -1.87
ROD1YOR018W COQ10Q08058 207 aa3.39□□□□□ -1.87
ROD1YOR018W APC2Q12440 853 aa3.39□□□□□ -1.87
ROD1YOR018W RTN2Q12443 393 aa3.39□□□□□ -1.87
ROD1YOR018W DCP1Q12517 231 aaPredicted RBP3.39□□□□□ -1.87
ROD1YOR018W YFR010W-AP0C5N0 62 aa3.38□□□□□ -1.87
ROD1YOR018W YHR214C-DP0CX93 97 aa3.38□□□□□ -1.87
ROD1YOR018W MEK1P24719 497 aaPredicted RBP3.38□□□□□ -1.87
ROD1YOR018W SED4P25365 1065 aa3.38□□□□□ -1.87
ROD1YOR018W LDB16P25587 256 aa3.38□□□□□ -1.87
ROD1YOR018W EHD3P28817 500 aa3.38□□□□□ -1.87
ROD1YOR018W ATS1P31386 333 aa3.38□□□□□ -1.87
ROD1YOR018W RNP1P32385 249 aa3.38□□□□□ -1.87
ROD1YOR018W ERG24P32462 438 aaKnown RBP3.38□□□□□ -1.87
ROD1YOR018W PUB1P32588 453 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
ROD1YOR018W FAT1P38225 669 aa3.38□□□□□ -1.87
ROD1YOR018W YAE1P47118 141 aaPredicted RBP3.38□□□□□ -1.87
ROD1YOR018W NIT3P49954 291 aa3.38□□□□□ -1.87
ROD1YOR018W FMP48P53233 369 aa3.38□□□□□ -1.87
ROD1YOR018W PBP1P53297 722 aaKnown RBP3.38□□□□□ -1.87
ROD1YOR018W BNA7Q04066 261 aa3.38□□□□□ -1.87
ROD1YOR018W GAL83Q04739 417 aa3.38□□□□□ -1.87
ROD1YOR018W COQ11Q05892 277 aa3.38□□□□□ -1.87
ROD1YOR018W REX3Q12090 404 aa3.38□□□□□ -1.87
ROD1YOR018W PRE7P23724 241 aaKnown RBP3.38□□□□□ -1.87
ROD1YOR018W EXG1P23776 448 aaKnown RBP3.38□□□□□ -1.87
ROD1YOR018W ADH7P25377 361 aa3.38□□□□□ -1.87
ROD1YOR018W YCR102CP25608 368 aa3.38□□□□□ -1.87
ROD1YOR018W MCM10P32354 571 aa3.38□□□□□ -1.87
ROD1YOR018W SLC1P33333 303 aa3.38□□□□□ -1.87
ROD1YOR018W MSN4P33749 630 aa3.38□□□□□ -1.87
ROD1YOR018W SOF1P33750 489 aaKnown RBP3.38□□□□□ -1.87
ROD1YOR018W GDS1P41913 522 aa3.38□□□□□ -1.87
ROD1YOR018W PHB2P50085 310 aa3.38□□□□□ -1.87
ROD1YOR018W COS10P52924 374 aa3.38□□□□□ -1.87
ROD1YOR018W PAU12P53343 120 aa3.38□□□□□ -1.87
ROD1YOR018W NUP116Q02630 1113 aa3.38□□□□□ -1.87
ROD1YOR018W BUR2Q05949 395 aa3.38□□□□□ -1.87
ROD1YOR018W YDL114WQ07530 308 aa3.38□□□□□ -1.87
ROD1YOR018W MSH5Q12175 901 aa3.38□□□□□ -1.87
ROD1YOR018W SET6Q12529 373 aa3.38□□□□□ -1.87
ROD1YOR018W REP1P03871 373 aa3.37□□□□□ -1.87
ROD1YOR018W HIS3P06633 220 aa3.37□□□□□ -1.87
ROD1YOR018W SEC12P11655 471 aa3.37□□□□□ -1.87
ROD1YOR018W RIB7P33312 244 aa3.37□□□□□ -1.87
ROD1YOR018W IPI1P38803 334 aaPredicted RBP3.37□□□□□ -1.87
ROD1YOR018W HIS6P40545 261 aa3.37□□□□□ -1.87
ROD1YOR018W SER2P42941 309 aa3.37□□□□□ -1.87
ROD1YOR018W ATG18P43601 500 aa3.37□□□□□ -1.87
ROD1YOR018W BNA2P47125 453 aa3.37□□□□□ -1.87
ROD1YOR018W BSC5P53755 489 aa3.37□□□□□ -1.87
ROD1YOR018W PDR16P53860 351 aaKnown RBP3.37□□□□□ -1.87
ROD1YOR018W YDR249CQ03787 373 aa3.37□□□□□ -1.87
ROD1YOR018W ASM4Q05166 528 aa3.37□□□□□ -1.87
ROD1YOR018W IPK1Q06667 281 aa3.37□□□□□ -1.87
ROD1YOR018W PRS5Q12265 496 aaKnown RBP3.37□□□□□ -1.87
ROD1YOR018W YOS9Q99220 542 aa3.37□□□□□ -1.87
ROD1YOR018W COX5BP00425 151 aa3.37□□□□□ -1.87
ROD1YOR018W GAL1P04385 528 aa3.37□□□□□ -1.87
ROD1YOR018W RPS16AP0CX51 143 aaKnown RBP3.37□□□□□ -1.87
ROD1YOR018W RPS16BP0CX52 143 aaKnown RBP3.37□□□□□ -1.87
ROD1YOR018W KRR1P25586 316 aaPredicted RBP3.37□□□□□ -1.87
ROD1YOR018W ERG9P29704 444 aa3.37□□□□□ -1.87
ROD1YOR018W AGA2P32781 87 aa3.37□□□□□ -1.87
ROD1YOR018W ECT1P33412 323 aa3.37□□□□□ -1.87
ROD1YOR018W MOH1P38191 138 aa3.37□□□□□ -1.87
ROD1YOR018W HTD2P38790 280 aaKnown RBP3.37□□□□□ -1.87
ROD1YOR018W DDI1P40087 428 aa3.37□□□□□ -1.87
ROD1YOR018W RBL2P48606 106 aaKnown RBP3.37□□□□□ -1.87
ROD1YOR018W KAP120Q02932 1032 aa3.37□□□□□ -1.87
ROD1YOR018W YPR196WQ06595 470 aa3.37□□□□□ -1.87
ROD1YOR018W RCN2Q12044 265 aa3.37□□□□□ -1.87
ROD1YOR018W TMA7Q3E764 64 aaKnown RBP3.37□□□□□ -1.87
ROD1YOR018W SUS1Q6WNK7 96 aa3.37□□□□□ -1.87
ROD1YOR018W GCN4P03069 281 aa3.36□□□□□ -1.87
ROD1YOR018W CWH43P25618 953 aa3.36□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 131.1 ms