RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C YMR262WP38430 313 aa9.17□□□□□ -0.94
SHM2YLR058C XBP1P40489 647 aa9.17□□□□□ -0.94
SHM2YLR058C ATG18P43601 500 aa9.17□□□□□ -0.94
SHM2YLR058C CWC23P52868 283 aaPredicted RBP9.17□□□□□ -0.94
SHM2YLR058C DOC1P53068 250 aa9.17□□□□□ -0.94
SHM2YLR058C YNL165WP53891 406 aa9.17□□□□□ -0.94
SHM2YLR058C CIK1Q01649 594 aa9.17□□□□□ -0.94
SHM2YLR058C SSK1Q07084 712 aa9.17□□□□□ -0.94
SHM2YLR058C RRI1Q12468 440 aa9.17□□□□□ -0.94
SHM2YLR058C HIS3P06633 220 aa9.16□□□□□ -0.94
SHM2YLR058C ADK1P07170 222 aaKnown RBP9.16□□□□□ -0.94
SHM2YLR058C RPS18AP0CX55 146 aaKnown RBP9.16□□□□□ -0.94
SHM2YLR058C RPS18BP0CX56 146 aaPredicted RBP9.16□□□□□ -0.94
SHM2YLR058C PCL1P24867 279 aa9.16□□□□□ -0.94
SHM2YLR058C ITR1P30605 584 aa9.16□□□□□ -0.94
SHM2YLR058C TMA19P35691 167 aaKnown RBP9.16□□□□□ -0.94
SHM2YLR058C SFK1P35735 353 aa9.16□□□□□ -0.94
SHM2YLR058C YHK8P38776 514 aa9.16□□□□□ -0.94
SHM2YLR058C FCY21P40039 528 aa9.16□□□□□ -0.94
SHM2YLR058C ELA1P53861 379 aaPredicted RBP9.16□□□□□ -0.94
SHM2YLR058C RSM28Q03430 361 aa9.16□□□□□ -0.94
SHM2YLR058C TDA1Q03533 586 aa9.16□□□□□ -0.94
SHM2YLR058C MRPL35Q06678 367 aa9.16□□□□□ -0.94
SHM2YLR058C PRS5Q12265 496 aaKnown RBP9.16□□□□□ -0.94
SHM2YLR058C NOP56Q12460 504 aaKnown RBP RIP-Chip data9.16□□□□□ -0.94not detected
SHM2YLR058C SER2P42941 309 aa9.15□□□□□ -0.94
SHM2YLR058C UBX6P47049 396 aa9.15□□□□□ -0.94
SHM2YLR058C MRH4P53166 561 aa9.15□□□□□ -0.94
SHM2YLR058C SAM50P53969 484 aa9.15□□□□□ -0.94
SHM2YLR058C YLR152CP54072 576 aa9.15□□□□□ -0.94
SHM2YLR058C YAP6Q03935 383 aa9.15□□□□□ -0.94
SHM2YLR058C ASR1Q06834 288 aa9.15□□□□□ -0.94
SHM2YLR058C RAF1Q06891 181 aa9.15□□□□□ -0.94
SHM2YLR058C YBL113CQ7M4S9 792 aa9.15□□□□□ -0.94
SHM2YLR058C NUM1Q00402 2748 aa9.15□□□□□ -0.95
SHM2YLR058C PRB1P09232 635 aa9.14□□□□□ -0.95
SHM2YLR058C ERG24P32462 438 aaKnown RBP9.14□□□□□ -0.95
SHM2YLR058C PPG1P32838 368 aa9.14□□□□□ -0.95
SHM2YLR058C FRM2P37261 193 aa9.14□□□□□ -0.95
SHM2YLR058C MBA1P38300 278 aa9.14□□□□□ -0.95
SHM2YLR058C GPI16P38875 610 aa9.14□□□□□ -0.95
SHM2YLR058C RTT105P40063 208 aa9.14□□□□□ -0.95
SHM2YLR058C PUG1P40100 303 aa9.14□□□□□ -0.95
SHM2YLR058C AAD14P42884 376 aa9.14□□□□□ -0.95
SHM2YLR058C LOH1P47055 219 aa9.14□□□□□ -0.95
SHM2YLR058C NIT3P49954 291 aa9.14□□□□□ -0.95
SHM2YLR058C MTM1P53320 366 aa9.14□□□□□ -0.95
SHM2YLR058C ATG41Q12048 136 aa9.14□□□□□ -0.95
SHM2YLR058C MCT1Q12283 360 aa9.14□□□□□ -0.95
SHM2YLR058C FOL3Q12676 427 aaPredicted RBP9.14□□□□□ -0.95
SHM2YLR058C PHO4P07270 312 aaKnown RBP9.14□□□□□ -0.95
SHM2YLR058C ATG15P25641 520 aa9.14□□□□□ -0.95
SHM2YLR058C MKS1P34072 584 aa9.14□□□□□ -0.95
SHM2YLR058C MIT1P40002 666 aa9.14□□□□□ -0.95
SHM2YLR058C GPP1P41277 250 aaKnown RBP9.14□□□□□ -0.95
SHM2YLR058C IMD3P50095 523 aaKnown RBP9.14□□□□□ -0.95
SHM2YLR058C SCY1P53009 804 aa9.14□□□□□ -0.95
SHM2YLR058C YIP4P53093 235 aa9.14□□□□□ -0.95
SHM2YLR058C YDR387CQ04162 555 aa9.14□□□□□ -0.95
SHM2YLR058C COX17Q12287 69 aa9.14□□□□□ -0.95
SHM2YLR058C RTN2Q12443 393 aa9.14□□□□□ -0.95
SHM2YLR058C HEM4P06174 275 aa9.13□□□□□ -0.95
SHM2YLR058C HOM6P31116 359 aaKnown RBP9.13□□□□□ -0.95
SHM2YLR058C IPI1P38803 334 aaPredicted RBP9.13□□□□□ -0.95
SHM2YLR058C DLS1P40366 167 aa9.13□□□□□ -0.95
SHM2YLR058C IDP2P41939 412 aa9.13□□□□□ -0.95
SHM2YLR058C COX5BP00425 151 aa9.12□□□□□ -0.95
SHM2YLR058C MES1P00958 751 aaKnown RBP9.12□□□□□ -0.95
SHM2YLR058C MAK32P23060 363 aa9.12□□□□□ -0.95
SHM2YLR058C ZUO1P32527 433 aaKnown RBP9.12□□□□□ -0.95
SHM2YLR058C MRPS5P33759 307 aa9.12□□□□□ -0.95
SHM2YLR058C YBR096WP38256 230 aa9.12□□□□□ -0.95
SHM2YLR058C TNA1P53322 534 aa9.12□□□□□ -0.95
SHM2YLR058C ERV29P53337 310 aa9.12□□□□□ -0.95
SHM2YLR058C AAH1P53909 347 aa9.12□□□□□ -0.95
SHM2YLR058C RCE1Q03530 315 aa9.12□□□□□ -0.95
SHM2YLR058C RCN2Q12044 265 aa9.12□□□□□ -0.95
SHM2YLR058C IZH2Q12442 317 aa9.12□□□□□ -0.95
SHM2YLR058C MATALPHA1P0CY06 175 aa9.11□□□□□ -0.95
SHM2YLR058C HMLALPHA1P0CY07 175 aa9.11□□□□□ -0.95
SHM2YLR058C SPT14P32363 452 aa9.11□□□□□ -0.95
SHM2YLR058C NPL6P32832 435 aa9.11□□□□□ -0.95
SHM2YLR058C TAT1P38085 619 aa9.11□□□□□ -0.95
SHM2YLR058C SSH1P38353 490 aaKnown RBP9.11□□□□□ -0.95
SHM2YLR058C IRC18P47056 224 aa9.11□□□□□ -0.95
SHM2YLR058C ACS2P52910 683 aaKnown RBP9.11□□□□□ -0.95
SHM2YLR058C PXR1P53335 271 aaPredicted RBP9.11□□□□□ -0.95
SHM2YLR058C ALG12P53730 551 aa9.11□□□□□ -0.95
SHM2YLR058C DIG2Q03373 323 aaKnown RBP9.11□□□□□ -0.95
SHM2YLR058C CRR1Q05790 422 aa9.11□□□□□ -0.95
SHM2YLR058C PEX30Q06169 523 aa9.11□□□□□ -0.95
SHM2YLR058C HEM25Q07534 307 aa9.11□□□□□ -0.95
SHM2YLR058C THI72Q08579 599 aa9.11□□□□□ -0.95
SHM2YLR058C CDC36P06100 191 aaPredicted RBP9.1□□□□□ -0.95
SHM2YLR058C NAM2P11325 894 aa9.1□□□□□ -0.95
SHM2YLR058C CNE1P27825 502 aa9.1□□□□□ -0.95
SHM2YLR058C RCN1P36054 211 aa9.1□□□□□ -0.95
SHM2YLR058C MSS4P38994 779 aa9.1□□□□□ -0.95
SHM2YLR058C YER084WP40057 128 aa9.1□□□□□ -0.95
SHM2YLR058C BNA6P43619 295 aa9.1□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms