RNA–Protein interactions for RNA: YJR102C

VPS25, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS25, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS25YJR102C TRM7P38238 310 aaKnown RBP2.48□□□□□ -2.01
VPS25YJR102C FMP33P46998 180 aa2.48□□□□□ -2.01
VPS25YJR102C EMC2P47133 292 aaKnown RBP2.48□□□□□ -2.01
VPS25YJR102C IBA57P47158 497 aa2.48□□□□□ -2.01
VPS25YJR102C TVP15Q03860 143 aa2.48□□□□□ -2.01
VPS25YJR102C ATG12P38316 186 aa2.47□□□□□ -2.01
VPS25YJR102C YER084WP40057 128 aa2.47□□□□□ -2.01
VPS25YJR102C FMP41P53889 259 aaKnown RBP2.47□□□□□ -2.01
VPS25YJR102C FEX1Q08913 375 aa2.47□□□□□ -2.01
VPS25YJR102C FEX2Q08991 375 aa2.47□□□□□ -2.01
VPS25YJR102C TIM22Q12328 207 aa2.47□□□□□ -2.01
VPS25YJR102C YEL009C-AA0A023PZF2 135 aa2.46□□□□□ -2.02
VPS25YJR102C POF1P25576 258 aa2.46□□□□□ -2.02
VPS25YJR102C SPL2P38839 148 aa2.46□□□□□ -2.02
VPS25YJR102C YER188WP40103 239 aa2.46□□□□□ -2.02
VPS25YJR102C MIX17Q03667 156 aa2.46□□□□□ -2.02
VPS25YJR102C SEC10Q06245 871 aa2.46□□□□□ -2.02
VPS25YJR102C CLP1Q08685 445 aaPredicted RBP2.46□□□□□ -2.02
VPS25YJR102C YAL064W-BO13512 126 aa2.45□□□□□ -2.02
VPS25YJR102C TDH2P00358 332 aaKnown RBP2.45□□□□□ -2.02
VPS25YJR102C RSA4P25382 515 aaKnown RBP2.45□□□□□ -2.02
VPS25YJR102C PEX3P28795 441 aa2.45□□□□□ -2.02
VPS25YJR102C UTR5P32630 166 aa2.45□□□□□ -2.02
VPS25YJR102C EBP2P36049 427 aaKnown RBP2.45□□□□□ -2.02
VPS25YJR102C CAB3P36076 571 aa2.45□□□□□ -2.02
VPS25YJR102C TIM21P53220 239 aa2.45□□□□□ -2.02
VPS25YJR102C SYF2P53277 215 aaPredicted RBP2.45□□□□□ -2.02
VPS25YJR102C YPL039WQ03080 316 aa2.45□□□□□ -2.02
VPS25YJR102C CTR3Q06686 241 aa2.45□□□□□ -2.02
VPS25YJR102C YOL019WQ08157 551 aa2.45□□□□□ -2.02
VPS25YJR102C YOS9Q99220 542 aa2.45□□□□□ -2.02
VPS25YJR102C MET16P18408 261 aaPredicted RBP2.44□□□□□ -2.02
VPS25YJR102C MRPL37P36532 105 aa2.44□□□□□ -2.02
VPS25YJR102C ARN2P38724 620 aa2.44□□□□□ -2.02
VPS25YJR102C SUR2P38992 349 aa2.44□□□□□ -2.02
VPS25YJR102C RTT105P40063 208 aa2.44□□□□□ -2.02
VPS25YJR102C TAD2P47058 250 aa2.44□□□□□ -2.02
VPS25YJR102C GPI8P49018 411 aa2.44□□□□□ -2.02
VPS25YJR102C LSB1P53281 241 aa2.44□□□□□ -2.02
VPS25YJR102C IGO1P53897 168 aa2.44□□□□□ -2.02
VPS25YJR102C CDC14Q00684 551 aa2.44□□□□□ -2.02
VPS25YJR102C GMC2Q06201 188 aa2.44□□□□□ -2.02
VPS25YJR102C OM45P16547 393 aa2.43□□□□□ -2.02
VPS25YJR102C HSM3P38348 480 aa2.43□□□□□ -2.02
VPS25YJR102C SER33P40510 469 aa2.43□□□□□ -2.02
VPS25YJR102C YNL095CP53932 642 aa2.43□□□□□ -2.02
VPS25YJR102C TRM44Q02648 567 aaKnown RBP2.43□□□□□ -2.02
VPS25YJR102C SDC1Q03323 175 aa2.43□□□□□ -2.02
VPS25YJR102C YMR166CQ03829 368 aa2.43□□□□□ -2.02
VPS25YJR102C LOA1Q06508 300 aa2.43□□□□□ -2.02
VPS25YJR102C ARV1Q06541 321 aa2.43□□□□□ -2.02
VPS25YJR102C ISD11Q6Q560 94 aa2.43□□□□□ -2.02
VPS25YJR102C HIS3P06633 220 aa2.42□□□□□ -2.02
VPS25YJR102C ZWF1P11412 505 aaKnown RBP2.42□□□□□ -2.02
VPS25YJR102C RRT12P25381 491 aa2.42□□□□□ -2.02
VPS25YJR102C HEK2P38199 381 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
VPS25YJR102C YHI9P38765 294 aa2.42□□□□□ -2.02
VPS25YJR102C SHC1P39000 512 aa2.42□□□□□ -2.02
VPS25YJR102C RCY1P39531 840 aa2.42□□□□□ -2.02
VPS25YJR102C COA1P40452 197 aa2.42□□□□□ -2.02
VPS25YJR102C STH1P32597 1359 aa2.41□□□□□ -2.02
VPS25YJR102C RPL24AP04449 155 aaKnown RBP2.41□□□□□ -2.02
VPS25YJR102C RPL4AP10664 362 aaKnown RBP2.41□□□□□ -2.02
VPS25YJR102C BMH1P29311 267 aaKnown RBP2.41□□□□□ -2.02
VPS25YJR102C CSG2P35206 410 aa2.41□□□□□ -2.02
VPS25YJR102C HMT1P38074 348 aa2.41□□□□□ -2.02
VPS25YJR102C PIR5P46999 287 aa2.41□□□□□ -2.02
VPS25YJR102C RPL4BP49626 362 aaKnown RBP2.41□□□□□ -2.02
VPS25YJR102C NIF3P53081 288 aa2.41□□□□□ -2.02
VPS25YJR102C SSU72P53538 206 aaPredicted RBP2.41□□□□□ -2.02
VPS25YJR102C CDD1Q06549 142 aa2.41□□□□□ -2.02
VPS25YJR102C HIS1P00498 297 aaKnown RBP2.4□□□□□ -2.03
VPS25YJR102C RPP0P05317 312 aaKnown RBP2.4□□□□□ -2.03
VPS25YJR102C RIB7P33312 244 aa2.4□□□□□ -2.03
VPS25YJR102C COY1P34237 679 aa2.4□□□□□ -2.03
VPS25YJR102C MED6P38782 295 aa2.4□□□□□ -2.03
VPS25YJR102C NPT1P39683 429 aaKnown RBP2.4□□□□□ -2.03
VPS25YJR102C SCC4P40090 624 aa2.4□□□□□ -2.03
VPS25YJR102C OST3P48439 350 aa2.4□□□□□ -2.03
VPS25YJR102C KAP114P53067 1004 aa2.4□□□□□ -2.03
VPS25YJR102C MPP6P53725 186 aaPredicted RBP2.4□□□□□ -2.03
VPS25YJR102C MNT4P53745 580 aa2.4□□□□□ -2.03
VPS25YJR102C OST6Q03723 332 aa2.4□□□□□ -2.03
VPS25YJR102C PEX10Q05568 337 aa2.4□□□□□ -2.03
VPS25YJR102C YBL112CQ3E7Y4 105 aa2.4□□□□□ -2.03
VPS25YJR102C AI5_BETAQ9ZZX0 354 aa2.4□□□□□ -2.03
VPS25YJR102C MEP1P40260 492 aa2.39□□□□□ -2.03
VPS25YJR102C YJL118WP47022 219 aa2.39□□□□□ -2.03
VPS25YJR102C SLX9P53251 210 aaPredicted RBP2.39□□□□□ -2.03
VPS25YJR102C COX20Q04935 205 aa2.39□□□□□ -2.03
VPS25YJR102C MRP1P10662 321 aaKnown RBP2.38□□□□□ -2.03
VPS25YJR102C DDI1P40087 428 aa2.38□□□□□ -2.03
VPS25YJR102C YJR012CP47087 207 aa2.38□□□□□ -2.03
VPS25YJR102C RAD10P06838 210 aa2.37□□□□□ -2.03
VPS25YJR102C YHL049CP38722 271 aa2.37□□□□□ -2.03
VPS25YJR102C YJL028WP47062 111 aa2.37□□□□□ -2.03
VPS25YJR102C YJR141WP47172 347 aaPredicted RBP2.37□□□□□ -2.03
VPS25YJR102C NBP1P52919 319 aaPredicted RBP2.37□□□□□ -2.03
VPS25YJR102C NBP35P52920 328 aa2.37□□□□□ -2.03
VPS25YJR102C SWS2P53937 143 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms