RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W FET3P38993 636 aa1.19□□□□□ -2.22
HIT1YJR055W EDC2P40023 145 aaPredicted RBP1.19□□□□□ -2.22
HIT1YJR055W YIL012WP40551 113 aa1.19□□□□□ -2.22
HIT1YJR055W NAS2P40555 220 aa1.19□□□□□ -2.22
HIT1YJR055W ECO1P43605 281 aa1.19□□□□□ -2.22
HIT1YJR055W BUD13P46947 266 aaPredicted RBP1.19□□□□□ -2.22
HIT1YJR055W SWC4P53201 476 aa1.19□□□□□ -2.22
HIT1YJR055W YNR066CP53752 436 aa1.19□□□□□ -2.22
HIT1YJR055W ABZ2Q03266 374 aa1.19□□□□□ -2.22
HIT1YJR055W SCS7Q03529 384 aa1.19□□□□□ -2.22
HIT1YJR055W CLP1Q08685 445 aaPredicted RBP1.19□□□□□ -2.22
HIT1YJR055W PRP46Q12417 451 aaPredicted RBP1.19□□□□□ -2.22
HIT1YJR055W LAG2Q92325 660 aa1.19□□□□□ -2.22
HIT1YJR055W TUS1Q06412 1307 aa1.18□□□□□ -2.22
HIT1YJR055W TDH3P00359 332 aaKnown RBP RIP-Chip data1.18□□□□□ -2.22not detected
HIT1YJR055W ILV1P00927 576 aaKnown RBP1.18□□□□□ -2.22
HIT1YJR055W IFM1P25038 676 aa1.18□□□□□ -2.22
HIT1YJR055W KRR1P25586 316 aaPredicted RBP1.18□□□□□ -2.22
HIT1YJR055W YKL063CP35725 167 aa1.18□□□□□ -2.22
HIT1YJR055W PET8P38921 284 aa1.18□□□□□ -2.22
HIT1YJR055W ASP1P38986 381 aaPredicted RBP1.18□□□□□ -2.22
HIT1YJR055W KRE29P40026 464 aa1.18□□□□□ -2.22
HIT1YJR055W YIA6P40556 373 aa1.18□□□□□ -2.22
HIT1YJR055W COX16P47081 118 aa1.18□□□□□ -2.22
HIT1YJR055W HSH155P49955 971 aaKnown RBP1.18□□□□□ -2.22
HIT1YJR055W PRP24P49960 444 aaKnown RBP1.18□□□□□ -2.22
HIT1YJR055W TPC1P53257 314 aa1.18□□□□□ -2.22
HIT1YJR055W YMR111CQ04461 462 aaPredicted RBP1.18□□□□□ -2.22
HIT1YJR055W MGR3Q04472 501 aa1.18□□□□□ -2.22
HIT1YJR055W GTO3Q04806 366 aa1.18□□□□□ -2.22
HIT1YJR055W YLR012CQ07927 99 aa1.18□□□□□ -2.22
HIT1YJR055W YOR292CQ08743 309 aa1.18□□□□□ -2.22
HIT1YJR055W REX3Q12090 404 aa1.18□□□□□ -2.22
HIT1YJR055W YPR063CQ12160 140 aa1.18□□□□□ -2.22
HIT1YJR055W POM33Q12164 279 aa1.18□□□□□ -2.22
HIT1YJR055W PAA1Q12447 191 aaKnown RBP1.18□□□□□ -2.22
HIT1YJR055W DCP1Q12517 231 aaPredicted RBP1.18□□□□□ -2.22
HIT1YJR055W MEC1P38111 2368 aa1.18□□□□□ -2.22
HIT1YJR055W GAL7P08431 366 aa1.17□□□□□ -2.22
HIT1YJR055W YKR032WP36127 104 aa1.17□□□□□ -2.22
HIT1YJR055W AIM29P36154 155 aa1.17□□□□□ -2.22
HIT1YJR055W YDR089WP38966 869 aa1.17□□□□□ -2.22
HIT1YJR055W SMC2P38989 1170 aaKnown RBP1.17□□□□□ -2.22
HIT1YJR055W MNN9P39107 395 aaKnown RBP1.17□□□□□ -2.22
HIT1YJR055W SOP4P39543 234 aaPredicted RBP1.17□□□□□ -2.22
HIT1YJR055W COG7P53195 279 aa1.17□□□□□ -2.22
HIT1YJR055W RSM27P53305 110 aa1.17□□□□□ -2.22
HIT1YJR055W YMR209CQ03648 457 aa1.17□□□□□ -2.22
HIT1YJR055W YDR114CQ04597 100 aa1.17□□□□□ -2.22
HIT1YJR055W ECM19Q06011 112 aa1.17□□□□□ -2.22
HIT1YJR055W CDD1Q06549 142 aa1.17□□□□□ -2.22
HIT1YJR055W ASR1Q06834 288 aa1.17□□□□□ -2.22
HIT1YJR055W RLP24Q07915 199 aaKnown RBP1.17□□□□□ -2.22
HIT1YJR055W YDR018CQ12185 396 aa1.17□□□□□ -2.22
HIT1YJR055W SIA1Q12212 622 aa1.17□□□□□ -2.22
HIT1YJR055W YPR064WQ12492 139 aa1.17□□□□□ -2.22
HIT1YJR055W YIL002W-AQ3E7Z5 69 aa1.17□□□□□ -2.22
HIT1YJR055W TDH2P00358 332 aaKnown RBP1.16□□□□□ -2.22
HIT1YJR055W MET2P08465 486 aa1.16□□□□□ -2.22
HIT1YJR055W RPS24AP0CX31 135 aaKnown RBP1.16□□□□□ -2.22
HIT1YJR055W RPS24BP0CX32 135 aaKnown RBP1.16□□□□□ -2.22
HIT1YJR055W DAL81P21657 970 aa1.16□□□□□ -2.22
HIT1YJR055W RPL5P26321 297 aaKnown RBP1.16□□□□□ -2.22
HIT1YJR055W RPC25P35718 212 aa1.16□□□□□ -2.22
HIT1YJR055W MCH2P36032 473 aa1.16□□□□□ -2.22
HIT1YJR055W YKL162CP36052 402 aa1.16□□□□□ -2.22
HIT1YJR055W INA22P40576 216 aa1.16□□□□□ -2.22
HIT1YJR055W LOH1P47055 219 aa1.16□□□□□ -2.22
HIT1YJR055W RIB4P50861 169 aaPredicted RBP1.16□□□□□ -2.22
HIT1YJR055W OKP1P53298 406 aa1.16□□□□□ -2.22
HIT1YJR055W UBX2Q04228 584 aa1.16□□□□□ -2.22
HIT1YJR055W VPS20Q04272 221 aa1.16□□□□□ -2.22
HIT1YJR055W CSI1Q04368 295 aa1.16□□□□□ -2.22
HIT1YJR055W NNT1Q05874 261 aa1.16□□□□□ -2.22
HIT1YJR055W STE23Q06010 1027 aa1.16□□□□□ -2.22
HIT1YJR055W GPN3Q06543 272 aa1.16□□□□□ -2.22
HIT1YJR055W MIM1Q08176 113 aa1.16□□□□□ -2.22
HIT1YJR055W TRM10Q12400 293 aa1.16□□□□□ -2.22
HIT1YJR055W DFM1Q12743 341 aaKnown RBP1.16□□□□□ -2.22
HIT1YJR055W ECM29P38737 1868 aa1.16□□□□□ -2.22
HIT1YJR055W RPL31AP0C2H8 113 aaKnown RBP1.15□□□□□ -2.23
HIT1YJR055W YAK1P14680 807 aa1.15□□□□□ -2.23
HIT1YJR055W OSM1P21375 501 aaKnown RBP1.15□□□□□ -2.23
HIT1YJR055W RPB9P27999 122 aa1.15□□□□□ -2.23
HIT1YJR055W RPS0AP32905 252 aaKnown RBP1.15□□□□□ -2.23
HIT1YJR055W TPO5P36029 618 aa1.15□□□□□ -2.23
HIT1YJR055W HIS2P38635 335 aa1.15□□□□□ -2.23
HIT1YJR055W YFL064CP43540 174 aa1.15□□□□□ -2.23
HIT1YJR055W RPE1P46969 238 aa1.15□□□□□ -2.23
HIT1YJR055W DBP6P53734 629 aaKnown RBP1.15□□□□□ -2.23
HIT1YJR055W ARP5P53946 755 aa1.15□□□□□ -2.23
HIT1YJR055W MRS2Q01926 470 aa1.15□□□□□ -2.23
HIT1YJR055W YPL077CQ02831 240 aa1.15□□□□□ -2.23
HIT1YJR055W SEC13Q04491 297 aaKnown RBP1.15□□□□□ -2.23
HIT1YJR055W YDR222WQ04925 415 aa1.15□□□□□ -2.23
HIT1YJR055W YLR446WQ06204 433 aa1.15□□□□□ -2.23
HIT1YJR055W YLR413WQ06689 675 aa1.15□□□□□ -2.23
HIT1YJR055W MRX4Q12467 430 aa1.15□□□□□ -2.23
HIT1YJR055W YMR316C-AI2HB70 103 aa1.14□□□□□ -2.23
HIT1YJR055W TPM1P17536 199 aaKnown RBP1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms