RNA–Protein interactions for RNA: YJL050W

MTR4, Transcript of ATP-dependent 3'-5' RNA helicase of the DExD/H family, yeast

Gene MTR4, Length 3,222 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MTR4	YJL050W	RPL40B	P0CH09	128 aa	Known RBP	3.19	□□□□□ -1.9
MTR4	YJL050W	MRP20	P32387	263 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	OMA1	P36163	345 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	YHR177W	P38867	453 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	SPO74	P45819	413 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	FAA4	P47912	694 aa	Known RBP	3.19	□□□□□ -1.9
MTR4	YJL050W	PAC10	P48363	199 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	YGL204C	P53089	101 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	YGL101W	P53144	215 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	YVH1	Q02256	364 aa	Known RBP	3.19	□□□□□ -1.9
MTR4	YJL050W	LRS4	Q04087	347 aa	Known RBP	3.19	□□□□□ -1.9
MTR4	YJL050W	YLR346C	Q06139	101 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	SHS1	Q07657	551 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	REX3	Q12090	404 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	RRG1	Q12167	365 aa	Predicted RBP	3.19	□□□□□ -1.9
MTR4	YJL050W	MPD2	Q99316	277 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	TRP4	P07285	380 aa	Predicted RBP	3.19	□□□□□ -1.9
MTR4	YJL050W	APE1	P14904	514 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	FUN26	P31381	517 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	DSS4	P32601	143 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	MSN4	P33749	630 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	YCR087C-A	P37263	153 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	TAT2	P38967	592 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	EAF5	P39995	279 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	VAB2	P40003	282 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	DLS1	P40366	167 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	TES1	P41903	349 aa	Known RBP	3.19	□□□□□ -1.9
MTR4	YJL050W	LSB3	P43603	459 aa	Known RBP	3.19	□□□□□ -1.9
MTR4	YJL050W	SIP4	P46954	829 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	OST3	P48439	350 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	YGL117W	P53133	265 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	MTM1	P53320	366 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	YLR455W	Q06188	304 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	NOC4	Q06512	552 aa	Predicted RBP	3.19	□□□□□ -1.9
MTR4	YJL050W	HDA2	Q06629	674 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	MRL1	Q06815	381 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	RRP42	Q12277	265 aa	Predicted RBP	3.19	□□□□□ -1.9
MTR4	YJL050W	MEX67	Q99257	599 aa	Known RBP	3.19	□□□□□ -1.9
MTR4	YJL050W	TKL1	P23254	680 aa	Known RBP	3.19	□□□□□ -1.9
MTR4	YJL050W	POP5	P28005	173 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	SEC17	P32602	292 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	GDI1	P39958	451 aa	Known RBP	3.19	□□□□□ -1.9
MTR4	YJL050W	YER188W	P40103	239 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	PAM16	P42949	149 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	PFD1	P46988	109 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	SMM1	P53720	384 aa	Known RBP	3.19	□□□□□ -1.9
MTR4	YJL050W	BER1	Q06688	274 aa	Known RBP	3.19	□□□□□ -1.9
MTR4	YJL050W	FRE8	Q12209	686 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	PDH1	Q12428	516 aa	Known RBP	3.19	□□□□□ -1.9
MTR4	YJL050W	CCH1	P50077	2039 aa		3.19	□□□□□ -1.9
MTR4	YJL050W	FMT1	P32785	401 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	TIP20	P33891	701 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	ECM15	P35195	104 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
MTR4	YJL050W	EHT1	P38295	451 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	TRS20	P38334	175 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	SHG1	P38337	142 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	RTT105	P40063	208 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	NIT1	P40447	199 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	ICE2	P40499	491 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	YIL060W	P40519	144 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	IBA57	P47158	497 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	LYS20	P48570	428 aa	Known RBP	3.18	□□□□□ -1.9
MTR4	YJL050W	ACS2	P52910	683 aa	Known RBP	3.18	□□□□□ -1.9
MTR4	YJL050W	MDM34	P53083	459 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	COQ6	P53318	479 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	YNL134C	P53912	376 aa	Known RBP	3.18	□□□□□ -1.9
MTR4	YJL050W	CWC27	Q02770	301 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	TEN1	Q07921	160 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	IZH3	Q07959	543 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	YOL073C	Q08232	322 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	LEA1	Q08963	238 aa	Predicted RBP	3.18	□□□□□ -1.9
MTR4	YJL050W	ERG27	Q12452	347 aa	Known RBP	3.18	□□□□□ -1.9
MTR4	YJL050W	YDR157W	A0A023PZE8	133 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	KIN28	P06242	306 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	DDI2	P0CH63	225 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	DDI3	P0CH64	225 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	BGL2	P15703	313 aa	Known RBP	3.18	□□□□□ -1.9
MTR4	YJL050W	FUN14	P18411	198 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	LSB5	P25369	354 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	YIH1	P25637	258 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
MTR4	YJL050W	MTR2	P34232	184 aa	Known RBP	3.18	□□□□□ -1.9
MTR4	YJL050W	YHR035W	P38769	630 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	YGR015C	P53208	328 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	STD1	Q02794	444 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	AIM6	Q07716	390 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	PAU23	Q07987	124 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	PAU17	Q12370	124 aa		3.18	□□□□□ -1.9
MTR4	YJL050W	HIS1	P00498	297 aa	Known RBP	3.17	□□□□□ -1.9
MTR4	YJL050W	HIS5	P07172	385 aa		3.17	□□□□□ -1.9
MTR4	YJL050W	TY2A-F	P0CX61	438 aa		3.17	□□□□□ -1.9
MTR4	YJL050W	TY2A-GR2	P0CX62	438 aa		3.17	□□□□□ -1.9
MTR4	YJL050W	PRE1	P22141	198 aa	Known RBP	3.17	□□□□□ -1.9
MTR4	YJL050W	LAC1	P28496	418 aa		3.17	□□□□□ -1.9
MTR4	YJL050W	NTH1	P32356	751 aa		3.17	□□□□□ -1.9
MTR4	YJL050W	YKL071W	P36086	256 aa		3.17	□□□□□ -1.9
MTR4	YJL050W	MRPL36	P36531	177 aa		3.17	□□□□□ -1.9
MTR4	YJL050W	SLM6	P38343	150 aa		3.17	□□□□□ -1.9
MTR4	YJL050W	FAU1	P40099	211 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms