RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W TYW3P53177 273 aa6.79□□□□□ -1.32
PEX28YHR150W YJR112W-AQ3E743 109 aa6.79□□□□□ -1.32
PEX28YHR150W ODC2Q99297 307 aa6.79□□□□□ -1.32
PEX28YHR150W FUR4P05316 633 aaKnown RBP6.78□□□□□ -1.32
PEX28YHR150W GAS1P22146 559 aaKnown RBP6.78□□□□□ -1.32
PEX28YHR150W SEC22P22214 214 aa6.78□□□□□ -1.32
PEX28YHR150W DCG1P32460 244 aa6.78□□□□□ -1.32
PEX28YHR150W SRB6P32570 121 aa6.78□□□□□ -1.32
PEX28YHR150W EMP24P32803 203 aaKnown RBP6.78□□□□□ -1.32
PEX28YHR150W ECM31P38122 312 aa6.78□□□□□ -1.32
PEX28YHR150W ARO9P38840 513 aaPredicted RBP6.78□□□□□ -1.32
PEX28YHR150W SMB1P40018 196 aaKnown RBP6.78□□□□□ -1.32
PEX28YHR150W YJR141WP47172 347 aaPredicted RBP6.78□□□□□ -1.32
PEX28YHR150W OKP1P53298 406 aa6.78□□□□□ -1.32
PEX28YHR150W ERG13P54839 491 aaKnown RBP6.78□□□□□ -1.32
PEX28YHR150W NAM8Q00539 523 aaKnown RBP6.78□□□□□ -1.32
PEX28YHR150W CTF19Q02732 369 aa6.78□□□□□ -1.32
PEX28YHR150W HDA2Q06629 674 aa6.78□□□□□ -1.32
PEX28YHR150W YPL272CQ08984 517 aa6.78□□□□□ -1.32
PEX28YHR150W PRM4Q12498 284 aa6.78□□□□□ -1.32
PEX28YHR150W RPS13P05756 151 aaKnown RBP6.77□□□□□ -1.33
PEX28YHR150W RPL20AP0CX23 172 aaKnown RBP6.77□□□□□ -1.33
PEX28YHR150W RPL20BP0CX24 172 aaPredicted RBP6.77□□□□□ -1.33
PEX28YHR150W DBF20P32328 564 aa6.77□□□□□ -1.33
PEX28YHR150W LAG1P38703 411 aa6.77□□□□□ -1.33
PEX28YHR150W YHC3P47040 408 aa6.77□□□□□ -1.33
PEX28YHR150W CCC1P47818 322 aa6.77□□□□□ -1.33
PEX28YHR150W SNN1P48232 102 aa6.77□□□□□ -1.33
PEX28YHR150W YGL159WP53110 370 aa6.77□□□□□ -1.33
PEX28YHR150W PEX25Q02969 394 aa6.77□□□□□ -1.33
PEX28YHR150W YOL073CQ08232 322 aa6.77□□□□□ -1.33
PEX28YHR150W YOR385WQ08909 290 aa6.77□□□□□ -1.33
PEX28YHR150W ORT1Q12375 292 aa6.77□□□□□ -1.33
PEX28YHR150W YSF3P0C074 85 aaPredicted RBP6.76□□□□□ -1.33
PEX28YHR150W MRPL33P20084 86 aa6.76□□□□□ -1.33
PEX28YHR150W CWH43P25618 953 aa6.76□□□□□ -1.33
PEX28YHR150W PAN3P36102 679 aaPredicted RBP6.76□□□□□ -1.33
PEX28YHR150W COS8P38723 381 aa6.76□□□□□ -1.33
PEX28YHR150W YNL208WP40159 199 aaKnown RBP6.76□□□□□ -1.33
PEX28YHR150W PHB2P50085 310 aa6.76□□□□□ -1.33
PEX28YHR150W YIP4P53093 235 aa6.76□□□□□ -1.33
PEX28YHR150W LUC7Q07508 261 aaPredicted RBP6.76□□□□□ -1.33
PEX28YHR150W BSC6Q08280 497 aa6.76□□□□□ -1.33
PEX28YHR150W TIP1P27654 210 aaPredicted RBP6.76□□□□□ -1.33
PEX28YHR150W NAB2P32505 525 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
PEX28YHR150W MTC7P32633 139 aa6.76□□□□□ -1.33
PEX28YHR150W VAM7P32912 316 aa6.76□□□□□ -1.33
PEX28YHR150W SPT10P35208 640 aa6.76□□□□□ -1.33
PEX28YHR150W GPX1P36014 167 aa6.76□□□□□ -1.33
PEX28YHR150W MRPL15P36523 253 aa6.76□□□□□ -1.33
PEX28YHR150W GCV3P39726 170 aaPredicted RBP6.76□□□□□ -1.33
PEX28YHR150W PAC1P39946 494 aaKnown RBP6.76□□□□□ -1.33
PEX28YHR150W PUG1P40100 303 aa6.76□□□□□ -1.33
PEX28YHR150W SYS1P41544 203 aa6.76□□□□□ -1.33
PEX28YHR150W MCM22P47167 239 aa6.76□□□□□ -1.33
PEX28YHR150W PHO23P50947 330 aa6.76□□□□□ -1.33
PEX28YHR150W GIM3P53900 129 aa6.76□□□□□ -1.33
PEX28YHR150W MRX8Q05473 314 aa6.76□□□□□ -1.33
PEX28YHR150W HEM25Q07534 307 aa6.76□□□□□ -1.33
PEX28YHR150W TY1A-DR4O74302 440 aa6.75□□□□□ -1.33
PEX28YHR150W SGA1P08019 549 aa6.75□□□□□ -1.33
PEX28YHR150W TY1A-AP0CX57 440 aa6.75□□□□□ -1.33
PEX28YHR150W TY1A-PR1P0CX58 440 aa6.75□□□□□ -1.33
PEX28YHR150W TY1A-ORP0CX59 440 aa6.75□□□□□ -1.33
PEX28YHR150W TY1A-PR2P0CX60 440 aa6.75□□□□□ -1.33
PEX28YHR150W TY1A-DR5P0CX65 440 aa6.75□□□□□ -1.33
PEX28YHR150W TY1A-ER2P0CX66 440 aa6.75□□□□□ -1.33
PEX28YHR150W TY1A-GR3P0CX67 440 aa6.75□□□□□ -1.33
PEX28YHR150W TY1A-LR1P0CX68 440 aa6.75□□□□□ -1.33
PEX28YHR150W TY1A-MR2P0CX69 440 aa6.75□□□□□ -1.33
PEX28YHR150W NUP1P20676 1076 aa6.75□□□□□ -1.33
PEX28YHR150W PAD1P33751 242 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
PEX28YHR150W YIL086CP40503 102 aa6.75□□□□□ -1.33
PEX28YHR150W CIN2P46670 268 aa6.75□□□□□ -1.33
PEX28YHR150W GPI14P47088 403 aaKnown RBP6.75□□□□□ -1.33
PEX28YHR150W TY1A-JR2P47099 440 aa6.75□□□□□ -1.33
PEX28YHR150W YJR115WP47152 169 aa6.75□□□□□ -1.33
PEX28YHR150W NRK1P53915 240 aa6.75□□□□□ -1.33
PEX28YHR150W NCE101Q02820 53 aa6.75□□□□□ -1.33
PEX28YHR150W ODC1Q03028 310 aa6.75□□□□□ -1.33
PEX28YHR150W TPP1Q03796 238 aa6.75□□□□□ -1.33
PEX28YHR150W TY1A-DR1Q03856 440 aa6.75□□□□□ -1.33
PEX28YHR150W TY1A-ML1Q04706 440 aaKnown RBP6.75□□□□□ -1.33
PEX28YHR150W SPR28Q04921 423 aa6.75□□□□□ -1.33
PEX28YHR150W GRC3Q07845 632 aa6.75□□□□□ -1.33
PEX28YHR150W TY1A-BRQ12217 440 aa6.75□□□□□ -1.33
PEX28YHR150W TY1A-NL2Q12470 440 aa6.75□□□□□ -1.33
PEX28YHR150W TY1A-GR2Q12485 440 aa6.75□□□□□ -1.33
PEX28YHR150W TFB5Q3E7C1 72 aaPredicted RBP6.75□□□□□ -1.33
PEX28YHR150W STE18P18852 110 aa6.74□□□□□ -1.33
PEX28YHR150W RPB8P20436 146 aa6.74□□□□□ -1.33
PEX28YHR150W ISC10P32645 267 aa6.74□□□□□ -1.33
PEX28YHR150W FLO10P36170 1169 aa6.74□□□□□ -1.33
PEX28YHR150W TIF11P38912 153 aaKnown RBP6.74□□□□□ -1.33
PEX28YHR150W AVT7P40501 490 aa6.74□□□□□ -1.33
PEX28YHR150W NIT3P49954 291 aa6.74□□□□□ -1.33
PEX28YHR150W BRR6P53062 197 aa6.74□□□□□ -1.33
PEX28YHR150W YGR012WP53206 393 aa6.74□□□□□ -1.33
PEX28YHR150W PDR16P53860 351 aaKnown RBP6.74□□□□□ -1.33
PEX28YHR150W MRPL51Q06090 140 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms