RNA–Protein interactions for RNA: YGR140W

CBF2, Transcript of Essential kinetochore protein, yeastyeast

Gene CBF2, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF2YGR140W BRR6P53062 197 aa1.95□□□□□ -2.1
CBF2YGR140W CWC25P53854 179 aaKnown RBP1.95□□□□□ -2.1
CBF2YGR140W SKI8Q02793 397 aaPredicted RBP1.95□□□□□ -2.1
CBF2YGR140W SNA4Q07549 140 aa1.95□□□□□ -2.1
CBF2YGR140W RSA1Q08932 381 aa1.95□□□□□ -2.1
CBF2YGR140W SLM3Q12093 417 aa1.95□□□□□ -2.1
CBF2YGR140W ATP16Q12165 160 aa1.95□□□□□ -2.1
CBF2YGR140W YER190C-BP0CX94 160 aa1.95□□□□□ -2.1
CBF2YGR140W YEL077W-AP0CX95 160 aa1.95□□□□□ -2.1
CBF2YGR140W YGR296C-BP0CX96 160 aa1.95□□□□□ -2.1
CBF2YGR140W YPL283W-BP0CX97 160 aa1.95□□□□□ -2.1
CBF2YGR140W YPR204C-AP0CX98 160 aa1.95□□□□□ -2.1
CBF2YGR140W SDH3P33421 198 aa1.95□□□□□ -2.1
CBF2YGR140W KDX1P36005 433 aa1.95□□□□□ -2.1
CBF2YGR140W HEK2P38199 381 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
CBF2YGR140W MED8P38304 223 aa1.95□□□□□ -2.1
CBF2YGR140W ATG12P38316 186 aa1.95□□□□□ -2.1
CBF2YGR140W MDM31P38880 579 aa1.95□□□□□ -2.1
CBF2YGR140W KRE29P40026 464 aa1.95□□□□□ -2.1
CBF2YGR140W NIF3P53081 288 aa1.95□□□□□ -2.1
CBF2YGR140W MMS2P53152 137 aa1.95□□□□□ -2.1
CBF2YGR140W SLX9P53251 210 aaPredicted RBP1.95□□□□□ -2.1
CBF2YGR140W RNH201P53942 307 aa1.95□□□□□ -2.1
CBF2YGR140W RPN8Q08723 338 aaKnown RBP1.95□□□□□ -2.1
CBF2YGR140W TAF10Q12030 206 aa1.95□□□□□ -2.1
CBF2YGR140W NAG1Q8TGN9 163 aa1.95□□□□□ -2.1
CBF2YGR140W RPL15AP05748 204 aaKnown RBP1.94□□□□□ -2.1
CBF2YGR140W CKA2P19454 339 aa1.94□□□□□ -2.1
CBF2YGR140W CPR4P25334 318 aa1.94□□□□□ -2.1
CBF2YGR140W PTH1P38876 190 aaKnown RBP1.94□□□□□ -2.1
CBF2YGR140W POG1P40473 351 aa1.94□□□□□ -2.1
CBF2YGR140W BMT5P40493 336 aa1.94□□□□□ -2.1
CBF2YGR140W RPR2P40571 144 aa1.94□□□□□ -2.1
CBF2YGR140W TRM9P49957 279 aa1.94□□□□□ -2.1
CBF2YGR140W SUR7P54003 302 aa1.94□□□□□ -2.1
CBF2YGR140W YLR152CP54072 576 aa1.94□□□□□ -2.1
CBF2YGR140W CDC14Q00684 551 aa1.94□□□□□ -2.1
CBF2YGR140W TPS1Q00764 495 aaKnown RBP1.94□□□□□ -2.1
CBF2YGR140W CTF19Q02732 369 aa1.94□□□□□ -2.1
CBF2YGR140W BCY1P07278 416 aaKnown RBP1.94□□□□□ -2.1
CBF2YGR140W YKR104WP0CE69 306 aa1.94□□□□□ -2.1
CBF2YGR140W BGL2P15703 313 aaKnown RBP1.94□□□□□ -2.1
CBF2YGR140W MRPL3P36516 390 aa1.94□□□□□ -2.1
CBF2YGR140W SOL2P37262 315 aa1.94□□□□□ -2.1
CBF2YGR140W RFT1P38206 574 aaPredicted RBP1.94□□□□□ -2.1
CBF2YGR140W SEN34P39707 275 aa1.94□□□□□ -2.1
CBF2YGR140W SEO1P39709 593 aa1.94□□□□□ -2.1
CBF2YGR140W PAN6P40459 309 aa1.94□□□□□ -2.1
CBF2YGR140W YJR141WP47172 347 aaPredicted RBP1.94□□□□□ -2.1
CBF2YGR140W YJR149WP47177 404 aa1.94□□□□□ -2.1
CBF2YGR140W ALG13P53178 202 aa1.94□□□□□ -2.1
CBF2YGR140W YNL040WP53960 456 aaPredicted RBP1.94□□□□□ -2.1
CBF2YGR140W YMR114CQ04471 368 aaKnown RBP1.94□□□□□ -2.1
CBF2YGR140W GRE1Q08969 168 aa1.94□□□□□ -2.1
CBF2YGR140W YPL150WQ12152 901 aa1.94□□□□□ -2.1
CBF2YGR140W MCT1Q12283 360 aa1.94□□□□□ -2.1
CBF2YGR140W JID1Q12350 301 aa1.94□□□□□ -2.1
CBF2YGR140W FOL3Q12676 427 aaPredicted RBP1.94□□□□□ -2.1
CBF2YGR140W COX5AP00424 153 aa1.93□□□□□ -2.1
CBF2YGR140W CYC3P06182 269 aa1.93□□□□□ -2.1
CBF2YGR140W IMP1P28627 190 aa1.93□□□□□ -2.1
CBF2YGR140W SPS18P32572 300 aa1.93□□□□□ -2.1
CBF2YGR140W YKL187CP34231 750 aa1.93□□□□□ -2.1
CBF2YGR140W GRE3P38715 327 aaKnown RBP RIP-Chip data1.93□□□□□ -2.1not detected
CBF2YGR140W PET8P38921 284 aa1.93□□□□□ -2.1
CBF2YGR140W TPN1P53099 579 aa1.93□□□□□ -2.1
CBF2YGR140W SCW4P53334 386 aaKnown RBP1.93□□□□□ -2.1
CBF2YGR140W MSO1P53604 210 aaKnown RBP1.93□□□□□ -2.1
CBF2YGR140W CRZ1P53968 678 aa1.93□□□□□ -2.1
CBF2YGR140W GOT1Q03554 138 aa1.93□□□□□ -2.1
CBF2YGR140W MMT2Q08970 484 aa1.93□□□□□ -2.1
CBF2YGR140W RFM1Q12192 310 aa1.93□□□□□ -2.1
CBF2YGR140W TUS1Q06412 1307 aa1.93□□□□□ -2.1
CBF2YGR140W RPL35AP0CX84 120 aaKnown RBP1.93□□□□□ -2.1
CBF2YGR140W RPL35BP0CX85 120 aaKnown RBP1.93□□□□□ -2.1
CBF2YGR140W MCK1P21965 375 aaKnown RBP1.93□□□□□ -2.1
CBF2YGR140W GIT1P25346 518 aa1.93□□□□□ -2.1
CBF2YGR140W TRR1P29509 319 aaKnown RBP1.93□□□□□ -2.1
CBF2YGR140W PMT2P31382 759 aa1.93□□□□□ -2.1
CBF2YGR140W AEP1P32493 518 aa1.93□□□□□ -2.1
CBF2YGR140W EGT2P42835 1041 aa1.93□□□□□ -2.1
CBF2YGR140W CPR7P47103 393 aa1.93□□□□□ -2.1
CBF2YGR140W PEX12Q04370 399 aa1.93□□□□□ -2.1
CBF2YGR140W SPG4Q04438 115 aa1.93□□□□□ -2.1
CBF2YGR140W HCR1Q05775 265 aaKnown RBP1.93□□□□□ -2.1
CBF2YGR140W DXO1Q06349 442 aa1.93□□□□□ -2.1
CBF2YGR140W YPL278CQ08990 100 aa1.93□□□□□ -2.1
CBF2YGR140W SFM1Q12314 213 aa1.93□□□□□ -2.1
CBF2YGR140W PUT1P09368 476 aa1.92□□□□□ -2.1
CBF2YGR140W URA6P15700 204 aa1.92□□□□□ -2.1
CBF2YGR140W RPB5P20434 215 aa1.92□□□□□ -2.1
CBF2YGR140W ASK1P35734 292 aa1.92□□□□□ -2.1
CBF2YGR140W PRY2P36110 329 aa1.92□□□□□ -2.1
CBF2YGR140W RCK1P38622 512 aa1.92□□□□□ -2.1
CBF2YGR140W VAB2P40003 282 aa1.92□□□□□ -2.1
CBF2YGR140W YIL152WP40455 235 aa1.92□□□□□ -2.1
CBF2YGR140W YIL067CP40514 678 aa1.92□□□□□ -2.1
CBF2YGR140W YIL012WP40551 113 aa1.92□□□□□ -2.1
CBF2YGR140W STB1P42845 420 aa1.92□□□□□ -2.1
CBF2YGR140W RTC4P53850 401 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 116.5 ms