RNA–Protein interactions for RNA: YGR109W-A

YGR109W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR109W-A, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-AYGR109W-A VBA1Q04301 562 aa1.87□□□□□ -2.11
YGR109W-AYGR109W-A FMP16Q12497 93 aa1.87□□□□□ -2.11
YGR109W-AYGR109W-A PAN1P32521 1480 aa1.87□□□□□ -2.11
YGR109W-AYGR109W-A INO80P53115 1489 aa1.87□□□□□ -2.11
YGR109W-AYGR109W-A HIS3P06633 220 aa1.86□□□□□ -2.11
YGR109W-AYGR109W-A RSA4P25382 515 aaKnown RBP1.86□□□□□ -2.11
YGR109W-AYGR109W-A SUR2P38992 349 aa1.86□□□□□ -2.11
YGR109W-AYGR109W-A FMP33P46998 180 aa1.86□□□□□ -2.11
YGR109W-AYGR109W-A OST3P48439 350 aa1.86□□□□□ -2.11
YGR109W-AYGR109W-A ARP5P53946 755 aa1.86□□□□□ -2.11
YGR109W-AYGR109W-A RGM1Q00453 211 aa1.86□□□□□ -2.11
YGR109W-AYGR109W-A YPL039WQ03080 316 aa1.86□□□□□ -2.11
YGR109W-AYGR109W-A YBL112CQ3E7Y4 105 aa1.86□□□□□ -2.11
YGR109W-AYGR109W-A RPS3P05750 240 aaKnown RBP1.85□□□□□ -2.11
YGR109W-AYGR109W-A YSR3P23501 404 aa1.85□□□□□ -2.11
YGR109W-AYGR109W-A ICL1P28240 557 aaPredicted RBP1.85□□□□□ -2.11
YGR109W-AYGR109W-A KRE6P32486 720 aa1.85□□□□□ -2.11
YGR109W-AYGR109W-A CAT2P32796 670 aaKnown RBP1.85□□□□□ -2.11
YGR109W-AYGR109W-A RIB7P33312 244 aa1.85□□□□□ -2.11
YGR109W-AYGR109W-A PHO89P38361 574 aa1.85□□□□□ -2.11
YGR109W-AYGR109W-A SPL2P38839 148 aa1.85□□□□□ -2.11
YGR109W-AYGR109W-A SER33P40510 469 aa1.85□□□□□ -2.11
YGR109W-AYGR109W-A RPE1P46969 238 aa1.85□□□□□ -2.11
YGR109W-AYGR109W-A MND1P53102 219 aa1.85□□□□□ -2.11
YGR109W-AYGR109W-A COG7P53195 279 aa1.85□□□□□ -2.11
YGR109W-AYGR109W-A LSB1P53281 241 aa1.85□□□□□ -2.11
YGR109W-AYGR109W-A RSM27P53305 110 aa1.85□□□□□ -2.11
YGR109W-AYGR109W-A ERV25P54837 211 aaKnown RBP1.85□□□□□ -2.11
YGR109W-AYGR109W-A SDC1Q03323 175 aa1.85□□□□□ -2.11
YGR109W-AYGR109W-A YMR166CQ03829 368 aa1.85□□□□□ -2.11
YGR109W-AYGR109W-A YLL007CQ07799 665 aa1.85□□□□□ -2.11
YGR109W-AYGR109W-A RPP0P05317 312 aaKnown RBP1.84□□□□□ -2.11
YGR109W-AYGR109W-A ZWF1P11412 505 aaKnown RBP1.84□□□□□ -2.11
YGR109W-AYGR109W-A POF1P25576 258 aa1.84□□□□□ -2.11
YGR109W-AYGR109W-A ERG2P32352 222 aa1.84□□□□□ -2.11
YGR109W-AYGR109W-A BFR1P38934 470 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
YGR109W-AYGR109W-A SSU72P53538 206 aaPredicted RBP1.84□□□□□ -2.11
YGR109W-AYGR109W-A FCF1Q05498 189 aaPredicted RBP1.84□□□□□ -2.11
YGR109W-AYGR109W-A SFH1Q06168 426 aa1.84□□□□□ -2.11
YGR109W-AYGR109W-A ARV1Q06541 321 aa1.84□□□□□ -2.11
YGR109W-AYGR109W-A YOL019WQ08157 551 aa1.84□□□□□ -2.11
YGR109W-AYGR109W-A YIL002W-AQ3E7Z5 69 aa1.84□□□□□ -2.11
YGR109W-AYGR109W-A CHD1P32657 1468 aa1.83□□□□□ -2.12
YGR109W-AYGR109W-A YMR316C-AI2HB70 103 aa1.83□□□□□ -2.12
YGR109W-AYGR109W-A OM45P16547 393 aa1.83□□□□□ -2.12
YGR109W-AYGR109W-A SNF6P18888 332 aa1.83□□□□□ -2.12
YGR109W-AYGR109W-A NTG1P31378 399 aa1.83□□□□□ -2.12
YGR109W-AYGR109W-A SKI2P35207 1287 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
YGR109W-AYGR109W-A HMT1P38074 348 aa1.83□□□□□ -2.12
YGR109W-AYGR109W-A ARN2P38724 620 aa1.83□□□□□ -2.12
YGR109W-AYGR109W-A SYF2P53277 215 aaPredicted RBP1.83□□□□□ -2.12
YGR109W-AYGR109W-A YNL095CP53932 642 aa1.83□□□□□ -2.12
YGR109W-AYGR109W-A TIM11P81449 96 aaPredicted RBP1.83□□□□□ -2.12
YGR109W-AYGR109W-A SPP2Q02521 185 aa1.83□□□□□ -2.12
YGR109W-AYGR109W-A EGD1Q02642 157 aaKnown RBP1.83□□□□□ -2.12
YGR109W-AYGR109W-A RRN5Q02983 363 aa1.83□□□□□ -2.12
YGR109W-AYGR109W-A RNH1Q04740 348 aa1.83□□□□□ -2.12
YGR109W-AYGR109W-A YPR172WQ06608 200 aa1.83□□□□□ -2.12
YGR109W-AYGR109W-A RUD3Q12234 484 aaKnown RBP1.83□□□□□ -2.12
YGR109W-AYGR109W-A COY1P34237 679 aa1.82□□□□□ -2.12
YGR109W-AYGR109W-A YUH1P35127 236 aa1.82□□□□□ -2.12
YGR109W-AYGR109W-A YGP1P38616 354 aaKnown RBP1.82□□□□□ -2.12
YGR109W-AYGR109W-A NUP84P52891 726 aa1.82□□□□□ -2.12
YGR109W-AYGR109W-A CTS2Q06350 511 aa1.82□□□□□ -2.12
YGR109W-AYGR109W-A CDD1Q06549 142 aa1.82□□□□□ -2.12
YGR109W-AYGR109W-A RDS3Q06835 107 aaPredicted RBP1.82□□□□□ -2.12
YGR109W-AYGR109W-A AGC1Q12482 902 aa1.82□□□□□ -2.12
YGR109W-AYGR109W-A YAL064W-BO13512 126 aa1.81□□□□□ -2.12
YGR109W-AYGR109W-A COS2P0CX12 379 aa1.81□□□□□ -2.12
YGR109W-AYGR109W-A COS3P0CX13 379 aa1.81□□□□□ -2.12
YGR109W-AYGR109W-A MER1P16523 270 aa1.81□□□□□ -2.12
YGR109W-AYGR109W-A TOM40P23644 387 aaKnown RBP1.81□□□□□ -2.12
YGR109W-AYGR109W-A CAM1P29547 415 aaKnown RBP1.81□□□□□ -2.12
YGR109W-AYGR109W-A CSG2P35206 410 aa1.81□□□□□ -2.12
YGR109W-AYGR109W-A HSM3P38348 480 aa1.81□□□□□ -2.12
YGR109W-AYGR109W-A AGX1P43567 385 aa1.81□□□□□ -2.12
YGR109W-AYGR109W-A LIA1P47120 325 aaKnown RBP1.81□□□□□ -2.12
YGR109W-AYGR109W-A NBP35P52920 328 aa1.81□□□□□ -2.12
YGR109W-AYGR109W-A GRX3Q03835 250 aa1.81□□□□□ -2.12
YGR109W-AYGR109W-A SEC10Q06245 871 aa1.81□□□□□ -2.12
YGR109W-AYGR109W-A YPL150WQ12152 901 aa1.81□□□□□ -2.12
YGR109W-AYGR109W-A RRP36Q12481 300 aaPredicted RBP1.81□□□□□ -2.12
YGR109W-AYGR109W-A SSA3P09435 649 aaKnown RBP1.8□□□□□ -2.12
YGR109W-AYGR109W-A RAD51P25454 400 aa1.8□□□□□ -2.12
YGR109W-AYGR109W-A TCD1P38756 429 aa1.8□□□□□ -2.12
YGR109W-AYGR109W-A CGR1P53188 120 aa1.8□□□□□ -2.12
YGR109W-AYGR109W-A GIM3P53900 129 aa1.8□□□□□ -2.12
YGR109W-AYGR109W-A SWS2P53937 143 aa1.8□□□□□ -2.12
YGR109W-AYGR109W-A TRM44Q02648 567 aaKnown RBP1.8□□□□□ -2.12
YGR109W-AYGR109W-A AI5_BETAQ9ZZX0 354 aa1.8□□□□□ -2.12
YGR109W-AYGR109W-A NUP157P40064 1391 aaKnown RBP1.8□□□□□ -2.12
YGR109W-AYGR109W-A QCR6P00127 147 aa1.79□□□□□ -2.12
YGR109W-AYGR109W-A RAD10P06838 210 aa1.79□□□□□ -2.12
YGR109W-AYGR109W-A RPL4AP10664 362 aaKnown RBP1.79□□□□□ -2.12
YGR109W-AYGR109W-A RPB4P20433 221 aaPredicted RBP1.79□□□□□ -2.12
YGR109W-AYGR109W-A VPS3P23643 1011 aa1.79□□□□□ -2.12
YGR109W-AYGR109W-A YHL049CP38722 271 aa1.79□□□□□ -2.12
YGR109W-AYGR109W-A PEX18P38855 283 aa1.79□□□□□ -2.12
YGR109W-AYGR109W-A MRX5P47007 382 aa1.79□□□□□ -2.12
YGR109W-AYGR109W-A EMC2P47133 292 aaKnown RBP1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms