RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C HRI1Q05905 244 aaKnown RBP6.92□□□□□ -1.3
PUP3YER094C ASR1Q06834 288 aa6.92□□□□□ -1.3
PUP3YER094C MCH4Q08268 501 aa6.92□□□□□ -1.3
PUP3YER094C YPL199CQ08954 240 aa6.92□□□□□ -1.3
PUP3YER094C ATG41Q12048 136 aa6.92□□□□□ -1.3
PUP3YER094C TMS1Q12116 473 aa6.92□□□□□ -1.3
PUP3YER094C LYS21Q12122 440 aaKnown RBP6.92□□□□□ -1.3
PUP3YER094C PDA1P16387 420 aaKnown RBP6.91□□□□□ -1.3
PUP3YER094C ERG4P25340 473 aa6.91□□□□□ -1.3
PUP3YER094C MGE1P38523 228 aa6.91□□□□□ -1.3
PUP3YER094C PTH1P38876 190 aaKnown RBP6.91□□□□□ -1.3
PUP3YER094C YLR152CP54072 576 aa6.91□□□□□ -1.3
PUP3YER094C MRP51Q02950 344 aa6.91□□□□□ -1.3
PUP3YER094C YMR265CQ03508 461 aaKnown RBP6.91□□□□□ -1.3
PUP3YER094C COQ11Q05892 277 aa6.91□□□□□ -1.3
PUP3YER094C YOR283WQ12040 230 aaKnown RBP6.91□□□□□ -1.3
PUP3YER094C YDL180WQ12301 547 aa6.91□□□□□ -1.3
PUP3YER094C SCEIP03882 235 aa6.9□□□□□ -1.3
PUP3YER094C SED4P25365 1065 aa6.9□□□□□ -1.3
PUP3YER094C ADH7P25377 361 aa6.9□□□□□ -1.3
PUP3YER094C PTC6P25646 442 aa6.9□□□□□ -1.3
PUP3YER094C CDC39P25655 2108 aaKnown RBP6.9□□□□□ -1.3
PUP3YER094C PRE4P30657 266 aa6.9□□□□□ -1.3
PUP3YER094C RIB7P33312 244 aa6.9□□□□□ -1.3
PUP3YER094C MRPL39P36533 70 aa6.9□□□□□ -1.3
PUP3YER094C AIM3P38266 947 aaKnown RBP6.9□□□□□ -1.3
PUP3YER094C STS1P38637 319 aa6.9□□□□□ -1.3
PUP3YER094C MSS4P38994 779 aa6.9□□□□□ -1.3
PUP3YER094C HPA3P39979 161 aa6.9□□□□□ -1.3
PUP3YER094C DLS1P40366 167 aa6.9□□□□□ -1.3
PUP3YER094C AIM20P40451 204 aa6.9□□□□□ -1.3
PUP3YER094C PXR1P53335 271 aaPredicted RBP6.9□□□□□ -1.3
PUP3YER094C YMR130WQ04223 302 aa6.9□□□□□ -1.3
PUP3YER094C GAS2Q06135 555 aa6.9□□□□□ -1.3
PUP3YER094C TPO3Q06451 622 aa6.9□□□□□ -1.3
PUP3YER094C YLR352WQ06479 807 aa6.9□□□□□ -1.3
PUP3YER094C MRPL35Q06678 367 aa6.9□□□□□ -1.3
PUP3YER094C TEL1P38110 2787 aa6.9□□□□□ -1.31
PUP3YER094C PHO4P07270 312 aaKnown RBP6.89□□□□□ -1.31
PUP3YER094C NAM2P11325 894 aa6.89□□□□□ -1.31
PUP3YER094C PUP1P25043 261 aa6.89□□□□□ -1.31
PUP3YER094C CNE1P27825 502 aa6.89□□□□□ -1.31
PUP3YER094C ERG24P32462 438 aaKnown RBP6.89□□□□□ -1.31
PUP3YER094C FRM2P37261 193 aa6.89□□□□□ -1.31
PUP3YER094C SSH1P38353 490 aaKnown RBP6.89□□□□□ -1.31
PUP3YER094C HTD2P38790 280 aaKnown RBP6.89□□□□□ -1.31
PUP3YER094C RPS0BP46654 252 aaKnown RBP6.89□□□□□ -1.31
PUP3YER094C HSV2P50079 448 aaPredicted RBP6.89□□□□□ -1.31
PUP3YER094C SOK2P53438 785 aaPredicted RBP6.89□□□□□ -1.31
PUP3YER094C YNR040WP53736 256 aa6.89□□□□□ -1.31
PUP3YER094C ELA1P53861 379 aaPredicted RBP6.89□□□□□ -1.31
PUP3YER094C AAH1P53909 347 aa6.89□□□□□ -1.31
PUP3YER094C SRP1Q02821 542 aaKnown RBP6.89□□□□□ -1.31
PUP3YER094C DIG2Q03373 323 aaKnown RBP6.89□□□□□ -1.31
PUP3YER094C RSM28Q03430 361 aa6.89□□□□□ -1.31
PUP3YER094C PLB2Q03674 706 aa6.89□□□□□ -1.31
PUP3YER094C PEX30Q06169 523 aa6.89□□□□□ -1.31
PUP3YER094C YDL218WQ07629 317 aa6.89□□□□□ -1.31
PUP3YER094C PRB1P09232 635 aa6.88□□□□□ -1.31
PUP3YER094C RPS16AP0CX51 143 aaKnown RBP6.88□□□□□ -1.31
PUP3YER094C RPS16BP0CX52 143 aaKnown RBP6.88□□□□□ -1.31
PUP3YER094C RCN1P36054 211 aa6.88□□□□□ -1.31
PUP3YER094C LOH1P47055 219 aa6.88□□□□□ -1.31
PUP3YER094C YJL016WP47072 561 aa6.88□□□□□ -1.31
PUP3YER094C MSE1P48525 536 aa6.88□□□□□ -1.31
PUP3YER094C ARO8P53090 500 aaKnown RBP6.88□□□□□ -1.31
PUP3YER094C RPN14P53196 417 aa6.88□□□□□ -1.31
PUP3YER094C SLI1P53304 468 aa6.88□□□□□ -1.31
PUP3YER094C NRK1P53915 240 aa6.88□□□□□ -1.31
PUP3YER094C YPL272CQ08984 517 aa6.88□□□□□ -1.31
PUP3YER094C MES1P00958 751 aaKnown RBP6.87□□□□□ -1.31
PUP3YER094C MATALPHA1P0CY06 175 aa6.87□□□□□ -1.31
PUP3YER094C HMLALPHA1P0CY07 175 aa6.87□□□□□ -1.31
PUP3YER094C PCL1P24867 279 aa6.87□□□□□ -1.31
PUP3YER094C HYM1P32464 399 aa6.87□□□□□ -1.31
PUP3YER094C MKS1P34072 584 aa6.87□□□□□ -1.31
PUP3YER094C YBR096WP38256 230 aa6.87□□□□□ -1.31
PUP3YER094C SMB1P40018 196 aaKnown RBP6.87□□□□□ -1.31
PUP3YER094C BNA6P43619 295 aa6.87□□□□□ -1.31
PUP3YER094C YIP4P53093 235 aa6.87□□□□□ -1.31
PUP3YER094C TPN1P53099 579 aa6.87□□□□□ -1.31
PUP3YER094C VHT1P53241 593 aa6.87□□□□□ -1.31
PUP3YER094C PCP1P53259 346 aa6.87□□□□□ -1.31
PUP3YER094C MRPL19P53875 158 aa6.87□□□□□ -1.31
PUP3YER094C LSM7P53905 115 aaKnown RBP6.87□□□□□ -1.31
PUP3YER094C RSM23Q01163 450 aa6.87□□□□□ -1.31
PUP3YER094C CTF19Q02732 369 aa6.87□□□□□ -1.31
PUP3YER094C YDR387CQ04162 555 aa6.87□□□□□ -1.31
PUP3YER094C MCT1Q12283 360 aa6.87□□□□□ -1.31
PUP3YER094C ORT1Q12375 292 aa6.87□□□□□ -1.31
PUP3YER094C GPM1P00950 247 aaKnown RBP6.86□□□□□ -1.31
PUP3YER094C CDC36P06100 191 aaPredicted RBP6.86□□□□□ -1.31
PUP3YER094C PHO2P07269 559 aa6.86□□□□□ -1.31
PUP3YER094C SGA1P08019 549 aa6.86□□□□□ -1.31
PUP3YER094C DBF20P32328 564 aa6.86□□□□□ -1.31
PUP3YER094C KRE6P32486 720 aa6.86□□□□□ -1.31
PUP3YER094C NAB2P32505 525 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31not detected
PUP3YER094C MRT4P33201 236 aaKnown RBP6.86□□□□□ -1.31
PUP3YER094C SNC2P33328 115 aa6.86□□□□□ -1.31
PUP3YER094C PTI1P39927 425 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms