RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPA1	YER049W	SGF73	P53165	657 aa		3.76	□□□□□ -1.81
TPA1	YER049W	COG7	P53195	279 aa		3.76	□□□□□ -1.81
TPA1	YER049W	COX18	P53239	316 aa		3.76	□□□□□ -1.81
TPA1	YER049W	YDR541C	Q03049	344 aa		3.76	□□□□□ -1.81
TPA1	YER049W	TMN2	Q04562	672 aa		3.76	□□□□□ -1.81
TPA1	YER049W	ROY1	Q04847	553 aa		3.76	□□□□□ -1.81
TPA1	YER049W	GRC3	Q07845	632 aa		3.76	□□□□□ -1.81
TPA1	YER049W	PUS9	Q12069	462 aa		3.76	□□□□□ -1.81
TPA1	YER049W	TMS1	Q12116	473 aa		3.76	□□□□□ -1.81
TPA1	YER049W	LYS21	Q12122	440 aa	Known RBP	3.76	□□□□□ -1.81
TPA1	YER049W	TRM13	Q12383	476 aa		3.76	□□□□□ -1.81
TPA1	YER049W	AHC1	Q12433	566 aa		3.76	□□□□□ -1.81
TPA1	YER049W	YKL033W-A	Q86ZR7	236 aa		3.76	□□□□□ -1.81
TPA1	YER049W	PNO1	Q99216	274 aa	Known RBP	3.76	□□□□□ -1.81
TPA1	YER049W	TRP4	P07285	380 aa	Predicted RBP	3.75	□□□□□ -1.81
TPA1	YER049W	RPB5	P20434	215 aa		3.75	□□□□□ -1.81
TPA1	YER049W	SUA5	P32579	426 aa		3.75	□□□□□ -1.81
TPA1	YER049W	UTP25	P40498	721 aa	Known RBP	3.75	□□□□□ -1.81
TPA1	YER049W	PHB2	P50085	310 aa		3.75	□□□□□ -1.81
TPA1	YER049W	YGL204C	P53089	101 aa		3.75	□□□□□ -1.81
TPA1	YER049W	YGL159W	P53110	370 aa		3.75	□□□□□ -1.81
TPA1	YER049W	YPL113C	Q02961	396 aa		3.75	□□□□□ -1.81
TPA1	YER049W	NAT4	Q04751	285 aa		3.75	□□□□□ -1.81
TPA1	YER049W	VPS68	Q12016	184 aa		3.75	□□□□□ -1.81
TPA1	YER049W	DET1	Q99288	334 aa	Known RBP	3.75	□□□□□ -1.81
TPA1	YER049W	INH1	P01097	85 aa		3.74	□□□□□ -1.81
TPA1	YER049W	KIN28	P06242	306 aa		3.74	□□□□□ -1.81
TPA1	YER049W	PRB1	P09232	635 aa		3.74	□□□□□ -1.81
TPA1	YER049W	YKR104W	P0CE69	306 aa		3.74	□□□□□ -1.81
TPA1	YER049W	HOM3	P10869	527 aa		3.74	□□□□□ -1.81
TPA1	YER049W	ARO3	P14843	370 aa	Known RBP	3.74	□□□□□ -1.81
TPA1	YER049W	SEC22	P22214	214 aa		3.74	□□□□□ -1.81
TPA1	YER049W	STE50	P25344	346 aa		3.74	□□□□□ -1.81
TPA1	YER049W	NAM9	P27929	486 aa		3.74	□□□□□ -1.81
TPA1	YER049W	DCG1	P32460	244 aa		3.74	□□□□□ -1.81
TPA1	YER049W	ERG1	P32476	496 aa	Known RBP	3.74	□□□□□ -1.81
TPA1	YER049W	MTC7	P32633	139 aa		3.74	□□□□□ -1.81
TPA1	YER049W	MRPL36	P36531	177 aa		3.74	□□□□□ -1.81
TPA1	YER049W	MAL32	P38158	584 aa		3.74	□□□□□ -1.81
TPA1	YER049W	IKI1	P38874	309 aa		3.74	□□□□□ -1.81
TPA1	YER049W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.74	□□□□□ -1.81	not detected
TPA1	YER049W	GCV3	P39726	170 aa	Predicted RBP	3.74	□□□□□ -1.81
TPA1	YER049W	TAF4	P50105	388 aa		3.74	□□□□□ -1.81
TPA1	YER049W	MNN10	P50108	393 aa	Known RBP	3.74	□□□□□ -1.81
TPA1	YER049W	VHT1	P53241	593 aa		3.74	□□□□□ -1.81
TPA1	YER049W	MAL12	P53341	584 aa		3.74	□□□□□ -1.81
TPA1	YER049W	HOL1	P53389	586 aa		3.74	□□□□□ -1.81
TPA1	YER049W	CAC2	Q04199	468 aa		3.74	□□□□□ -1.81
TPA1	YER049W	RPC11	Q04307	110 aa	Predicted RBP	3.74	□□□□□ -1.81
TPA1	YER049W	SNT309	Q06091	175 aa	Predicted RBP	3.74	□□□□□ -1.81
TPA1	YER049W	YLR352W	Q06479	807 aa		3.74	□□□□□ -1.81
TPA1	YER049W	VMA9	Q3E7B6	73 aa		3.74	□□□□□ -1.81
TPA1	YER049W	YLR358C	O13565	187 aa		3.74	□□□□□ -1.81
TPA1	YER049W	ADK1	P07170	222 aa	Known RBP	3.74	□□□□□ -1.81
TPA1	YER049W	APA2	P22108	325 aa		3.74	□□□□□ -1.81
TPA1	YER049W	BOS1	P25385	244 aa		3.74	□□□□□ -1.81
TPA1	YER049W	CNE1	P27825	502 aa		3.74	□□□□□ -1.81
TPA1	YER049W	MRP20	P32387	263 aa		3.74	□□□□□ -1.81
TPA1	YER049W	YKL162C	P36052	402 aa		3.74	□□□□□ -1.81
TPA1	YER049W	MRPL37	P36532	105 aa		3.74	□□□□□ -1.81
TPA1	YER049W	ATP3	P38077	311 aa	Known RBP	3.74	□□□□□ -1.81
TPA1	YER049W	YPC1	P38298	316 aa		3.74	□□□□□ -1.81
TPA1	YER049W	MTC4	P38335	694 aa	Known RBP	3.74	□□□□□ -1.81
TPA1	YER049W	ARO9	P38840	513 aa	Predicted RBP	3.74	□□□□□ -1.81
TPA1	YER049W	SMB1	P40018	196 aa	Known RBP	3.74	□□□□□ -1.81
TPA1	YER049W	SNN1	P48232	102 aa		3.74	□□□□□ -1.81
TPA1	YER049W	PHO23	P50947	330 aa		3.74	□□□□□ -1.81
TPA1	YER049W	ERG26	P53199	349 aa	Known RBP	3.74	□□□□□ -1.81
TPA1	YER049W	NRK1	P53915	240 aa		3.74	□□□□□ -1.81
TPA1	YER049W	FDH1	Q08911	376 aa		3.74	□□□□□ -1.81
TPA1	YER049W	RTK1	Q12100	620 aa	Predicted RBP	3.74	□□□□□ -1.81
TPA1	YER049W	EAF3	Q12432	401 aa		3.74	□□□□□ -1.81
TPA1	YER049W	PCC1	Q3E833	88 aa		3.74	□□□□□ -1.81
TPA1	YER049W	MDM35	O60200	86 aa		3.73	□□□□□ -1.81
TPA1	YER049W	PHO2	P07269	559 aa		3.73	□□□□□ -1.81
TPA1	YER049W	PET494	P07390	489 aa	Predicted RBP	3.73	□□□□□ -1.81
TPA1	YER049W	CHO1	P08456	276 aa		3.73	□□□□□ -1.81
TPA1	YER049W	YOR062C	P36025	268 aa		3.73	□□□□□ -1.81
TPA1	YER049W	PEX32	P38292	413 aa		3.73	□□□□□ -1.81
TPA1	YER049W	SDS24	P38314	527 aa		3.73	□□□□□ -1.81
TPA1	YER049W	FMO1	P38866	432 aa		3.73	□□□□□ -1.81
TPA1	YER049W	ASP1	P38986	381 aa	Predicted RBP	3.73	□□□□□ -1.81
TPA1	YER049W	FAF1	P40546	346 aa	Predicted RBP	3.73	□□□□□ -1.81
TPA1	YER049W	GTT1	P40582	234 aa		3.73	□□□□□ -1.81
TPA1	YER049W	PHB1	P40961	287 aa		3.73	□□□□□ -1.81
TPA1	YER049W	RPL10	P41805	221 aa	Known RBP	3.73	□□□□□ -1.81
TPA1	YER049W	ALK1	P43633	760 aa	Known RBP	3.73	□□□□□ -1.81
TPA1	YER049W	MRX5	P47007	382 aa		3.73	□□□□□ -1.81
TPA1	YER049W	PUS4	P48567	403 aa	Known RBP	3.73	□□□□□ -1.81
TPA1	YER049W	YGR026W	P53217	278 aa		3.73	□□□□□ -1.81
TPA1	YER049W	SMX3	P54999	86 aa	Predicted RBP	3.73	□□□□□ -1.81
TPA1	YER049W	VBA4	Q04602	768 aa	Known RBP	3.73	□□□□□ -1.81
TPA1	YER049W	NMA1	Q06178	401 aa	Known RBP	3.73	□□□□□ -1.81
TPA1	YER049W	TAZ1	Q06510	381 aa		3.73	□□□□□ -1.81
TPA1	YER049W	ATG10	Q07879	167 aa		3.73	□□□□□ -1.81
TPA1	YER049W	RRI1	Q12468	440 aa		3.73	□□□□□ -1.81
TPA1	YER049W	PRM4	Q12498	284 aa		3.73	□□□□□ -1.81
TPA1	YER049W	GPI12	P23797	304 aa		3.72	□□□□□ -1.81
TPA1	YER049W	CWH43	P25618	953 aa		3.72	□□□□□ -1.81
TPA1	YER049W	MCM10	P32354	571 aa		3.72	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms