RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W STP2P38704 541 aa1.84□□□□□ -2.11
SIR4YDR227W MIP6P38760 659 aaKnown RBP1.84□□□□□ -2.11
SIR4YDR227W RPP1P38786 293 aa1.84□□□□□ -2.11
SIR4YDR227W PCL5P38794 229 aa1.84□□□□□ -2.11
SIR4YDR227W AVT2P39981 480 aa1.84□□□□□ -2.11
SIR4YDR227W ALG8P40351 577 aa1.84□□□□□ -2.11
SIR4YDR227W FIS1P40515 155 aa1.84□□□□□ -2.11
SIR4YDR227W SFH5P47008 294 aa1.84□□□□□ -2.11
SIR4YDR227W CPR7P47103 393 aa1.84□□□□□ -2.11
SIR4YDR227W TRI1Q05024 226 aa1.84□□□□□ -2.11
SIR4YDR227W YLR179CQ06252 201 aaKnown RBP1.84□□□□□ -2.11
SIR4YDR227W HNT3Q08702 217 aa1.84□□□□□ -2.11
SIR4YDR227W NDD1Q08887 554 aa1.84□□□□□ -2.11
SIR4YDR227W RFM1Q12192 310 aa1.84□□□□□ -2.11
SIR4YDR227W YDL007C-AQ2V2Q0 85 aa1.84□□□□□ -2.11
SIR4YDR227W RPP2AP05319 106 aaKnown RBP1.84□□□□□ -2.12
SIR4YDR227W CDC6P09119 513 aa1.84□□□□□ -2.12
SIR4YDR227W CDC23P16522 626 aa1.84□□□□□ -2.12
SIR4YDR227W ATS1P31386 333 aa1.84□□□□□ -2.12
SIR4YDR227W ANR2P36090 516 aaPredicted RBP1.84□□□□□ -2.12
SIR4YDR227W YIL012WP40551 113 aa1.84□□□□□ -2.12
SIR4YDR227W GOR1P53839 350 aa1.84□□□□□ -2.12
SIR4YDR227W TPS1Q00764 495 aaKnown RBP1.84□□□□□ -2.12
SIR4YDR227W YDR132CQ03900 495 aa1.84□□□□□ -2.12
SIR4YDR227W NAT4Q04751 285 aa1.84□□□□□ -2.12
SIR4YDR227W TAF9Q05027 157 aa1.84□□□□□ -2.12
SIR4YDR227W RQC1Q05468 723 aaKnown RBP1.84□□□□□ -2.12
SIR4YDR227W MED2Q12124 431 aa1.84□□□□□ -2.12
SIR4YDR227W SIA1Q12212 622 aa1.84□□□□□ -2.12
SIR4YDR227W YOR114WQ12219 294 aa1.84□□□□□ -2.12
SIR4YDR227W SNU23Q12368 194 aaPredicted RBP1.84□□□□□ -2.12
SIR4YDR227W LSO2Q3E772 92 aaKnown RBP1.84□□□□□ -2.12
SIR4YDR227W TOR2P32600 2474 aaKnown RBP1.84□□□□□ -2.12
SIR4YDR227W DBF2P22204 572 aa1.83□□□□□ -2.12
SIR4YDR227W DAL2P25335 343 aa1.83□□□□□ -2.12
SIR4YDR227W ZUO1P32527 433 aaKnown RBP1.83□□□□□ -2.12
SIR4YDR227W OM14P38325 134 aa1.83□□□□□ -2.12
SIR4YDR227W GEP4P38812 185 aa1.83□□□□□ -2.12
SIR4YDR227W RBG1P39729 369 aa1.83□□□□□ -2.12
SIR4YDR227W SSP120P39931 234 aaKnown RBP1.83□□□□□ -2.12
SIR4YDR227W PHB1P40961 287 aa1.83□□□□□ -2.12
SIR4YDR227W YDL186WP48568 277 aa1.83□□□□□ -2.12
SIR4YDR227W BET5Q03630 159 aa1.83□□□□□ -2.12
SIR4YDR227W YLR412C-AQ3E742 68 aa1.83□□□□□ -2.12
SIR4YDR227W GLT1Q12680 2145 aaKnown RBP1.83□□□□□ -2.12
SIR4YDR227W ATG22P25568 528 aa1.83□□□□□ -2.12
SIR4YDR227W COS9P36034 407 aa1.83□□□□□ -2.12
SIR4YDR227W SRL3P36167 246 aa1.83□□□□□ -2.12
SIR4YDR227W BNA4P38169 460 aa1.83□□□□□ -2.12
SIR4YDR227W OLA1P38219 394 aaKnown RBP1.83□□□□□ -2.12
SIR4YDR227W HIS2P38635 335 aa1.83□□□□□ -2.12
SIR4YDR227W MBB1P39534 108 aa1.83□□□□□ -2.12
SIR4YDR227W VPS52P39904 641 aa1.83□□□□□ -2.12
SIR4YDR227W SIP4P46954 829 aa1.83□□□□□ -2.12
SIR4YDR227W MSY1P48527 492 aa1.83□□□□□ -2.12
SIR4YDR227W SOL1P50278 321 aa1.83□□□□□ -2.12
SIR4YDR227W RNT1Q02555 471 aa1.83□□□□□ -2.12
SIR4YDR227W YPL068CQ02749 293 aa1.83□□□□□ -2.12
SIR4YDR227W LGE1Q02796 332 aaKnown RBP1.83□□□□□ -2.12
SIR4YDR227W GCN5Q03330 439 aa1.83□□□□□ -2.12
SIR4YDR227W FCY22Q12119 530 aa1.83□□□□□ -2.12
SIR4YDR227W YKL183C-AQ3E765 70 aa1.83□□□□□ -2.12
SIR4YDR227W SRN2Q99176 213 aa1.83□□□□□ -2.12
SIR4YDR227W GAL10P04397 699 aa1.83□□□□□ -2.12
SIR4YDR227W RPB9P27999 122 aa1.83□□□□□ -2.12
SIR4YDR227W SHP1P34223 423 aa1.83□□□□□ -2.12
SIR4YDR227W TIM17P39515 158 aa1.83□□□□□ -2.12
SIR4YDR227W YER076CP40049 302 aa1.83□□□□□ -2.12
SIR4YDR227W PDS1P40316 373 aaPredicted RBP1.83□□□□□ -2.12
SIR4YDR227W WWM1P43582 211 aaKnown RBP1.83□□□□□ -2.12
SIR4YDR227W AIM25P47140 327 aa1.83□□□□□ -2.12
SIR4YDR227W BOR1P53838 576 aa1.83□□□□□ -2.12
SIR4YDR227W KTR6P54070 446 aa1.83□□□□□ -2.12
SIR4YDR227W YML122CQ03207 126 aa1.83□□□□□ -2.12
SIR4YDR227W MCH4Q08268 501 aa1.83□□□□□ -2.12
SIR4YDR227W RSA1Q08932 381 aa1.83□□□□□ -2.12
SIR4YDR227W RPN6Q12377 434 aa1.83□□□□□ -2.12
SIR4YDR227W IZH4Q99393 312 aa1.83□□□□□ -2.12
SIR4YDR227W DDI2P0CH63 225 aa1.82□□□□□ -2.12
SIR4YDR227W DDI3P0CH64 225 aa1.82□□□□□ -2.12
SIR4YDR227W ACP1P32463 125 aa1.82□□□□□ -2.12
SIR4YDR227W FLO10P36170 1169 aa1.82□□□□□ -2.12
SIR4YDR227W KRE29P40026 464 aa1.82□□□□□ -2.12
SIR4YDR227W AYR1P40471 297 aa1.82□□□□□ -2.12
SIR4YDR227W SER33P40510 469 aa1.82□□□□□ -2.12
SIR4YDR227W MET28P40573 187 aa1.82□□□□□ -2.12
SIR4YDR227W PMT6P42934 759 aa1.82□□□□□ -2.12
SIR4YDR227W RKM2Q03942 479 aa1.82□□□□□ -2.12
SIR4YDR227W RIB3Q99258 208 aa1.82□□□□□ -2.12
SIR4YDR227W YOR338WQ99326 363 aa1.82□□□□□ -2.12
SIR4YDR227W BI2P03873 423 aa1.82□□□□□ -2.12
SIR4YDR227W BCY1P07278 416 aaKnown RBP1.82□□□□□ -2.12
SIR4YDR227W RPL16BP26785 198 aaKnown RBP1.82□□□□□ -2.12
SIR4YDR227W YCR041WP37265 110 aa1.82□□□□□ -2.12
SIR4YDR227W BDH1P39714 382 aa1.82□□□□□ -2.12
SIR4YDR227W CUP9P41817 306 aa1.82□□□□□ -2.12
SIR4YDR227W TRS85P46944 698 aa1.82□□□□□ -2.12
SIR4YDR227W APS3P47064 194 aa1.82□□□□□ -2.12
SIR4YDR227W TRM9P49957 279 aa1.82□□□□□ -2.12
SIR4YDR227W UBC11P52492 156 aa1.82□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 194.1 ms