RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W AMD1P15274 810 aaKnown RBP3.85□□□□□ -1.79
TRS85YDR108W PDA1P16387 420 aaKnown RBP3.85□□□□□ -1.79
TRS85YDR108W SEC22P22214 214 aa3.85□□□□□ -1.79
TRS85YDR108W RBK1P25332 333 aa3.85□□□□□ -1.79
TRS85YDR108W ARE1P25628 610 aa3.85□□□□□ -1.79
TRS85YDR108W PRE4P30657 266 aa3.85□□□□□ -1.79
TRS85YDR108W STE14P32584 239 aa3.85□□□□□ -1.79
TRS85YDR108W LOT5P34234 306 aa3.85□□□□□ -1.79
TRS85YDR108W SHE2P36068 246 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
TRS85YDR108W BNA4P38169 460 aa3.85□□□□□ -1.79
TRS85YDR108W ZTA1P38230 334 aaKnown RBP3.85□□□□□ -1.79
TRS85YDR108W SRP68P38687 599 aaKnown RBP3.85□□□□□ -1.79
TRS85YDR108W ASP1P38986 381 aaPredicted RBP3.85□□□□□ -1.79
TRS85YDR108W ISC1P40015 477 aaKnown RBP3.85□□□□□ -1.79
TRS85YDR108W YIL152WP40455 235 aa3.85□□□□□ -1.79
TRS85YDR108W IME4P41833 600 aa3.85□□□□□ -1.79
TRS85YDR108W AIM25P47140 327 aa3.85□□□□□ -1.79
TRS85YDR108W FRE4P53746 719 aa3.85□□□□□ -1.79
TRS85YDR108W SNP1Q00916 300 aaPredicted RBP3.85□□□□□ -1.79
TRS85YDR108W DYN2Q02647 92 aa3.85□□□□□ -1.79
TRS85YDR108W ARG7Q04728 441 aa3.85□□□□□ -1.79
TRS85YDR108W YMR315WQ04869 349 aaKnown RBP3.85□□□□□ -1.79
TRS85YDR108W DAL4Q04895 635 aa3.85□□□□□ -1.79
TRS85YDR108W MRPL35Q06678 367 aa3.85□□□□□ -1.79
TRS85YDR108W NAT5Q08689 176 aa3.85□□□□□ -1.79
TRS85YDR108W MMT2Q08970 484 aa3.85□□□□□ -1.79
TRS85YDR108W FCF2Q12035 217 aaPredicted RBP3.85□□□□□ -1.79
TRS85YDR108W SIA1Q12212 622 aa3.85□□□□□ -1.79
TRS85YDR108W MDY2Q12285 212 aa3.85□□□□□ -1.79
TRS85YDR108W WTM1Q12363 437 aaKnown RBP3.85□□□□□ -1.79
TRS85YDR108W AIM45Q12480 344 aaKnown RBP3.85□□□□□ -1.79
TRS85YDR108W BI3Q9ZZW7 517 aa3.85□□□□□ -1.79
TRS85YDR108W ADH7P25377 361 aa3.85□□□□□ -1.79
TRS85YDR108W GEX1P25596 615 aa3.85□□□□□ -1.79
TRS85YDR108W RIB1P38066 345 aa3.85□□□□□ -1.79
TRS85YDR108W RIB5P38145 238 aa3.85□□□□□ -1.79
TRS85YDR108W YHR033WP38690 423 aa3.85□□□□□ -1.79
TRS85YDR108W PRP39P39682 629 aaKnown RBP3.85□□□□□ -1.79
TRS85YDR108W YEL057CP39983 233 aa3.85□□□□□ -1.79
TRS85YDR108W FIR1P40020 876 aa3.85□□□□□ -1.79
TRS85YDR108W MOB2P43563 287 aa3.85□□□□□ -1.79
TRS85YDR108W RMD8P43620 662 aa3.85□□□□□ -1.79
TRS85YDR108W YHC3P47040 408 aa3.85□□□□□ -1.79
TRS85YDR108W ASI3P53983 676 aa3.85□□□□□ -1.79
TRS85YDR108W TIM8P57744 87 aa3.85□□□□□ -1.79
TRS85YDR108W YKR011CQ02209 353 aa3.85□□□□□ -1.79
TRS85YDR108W RSM10Q03201 203 aa3.85□□□□□ -1.79
TRS85YDR108W CCE1Q03702 353 aa3.85□□□□□ -1.79
TRS85YDR108W MSS11Q03825 758 aa3.85□□□□□ -1.79
TRS85YDR108W AIM33Q04516 312 aa3.85□□□□□ -1.79
TRS85YDR108W YMR253CQ04835 414 aa3.85□□□□□ -1.79
TRS85YDR108W HRD3Q05787 833 aa3.85□□□□□ -1.79
TRS85YDR108W CNL1Q06333 122 aa3.85□□□□□ -1.79
TRS85YDR108W YLR036CQ07986 203 aa3.85□□□□□ -1.79
TRS85YDR108W INP54Q08227 384 aaKnown RBP3.85□□□□□ -1.79
TRS85YDR108W JLP1Q12358 412 aa3.85□□□□□ -1.79
TRS85YDR108W SFG1Q12507 346 aa3.85□□□□□ -1.79
TRS85YDR108W MOT1P32333 1867 aa3.84□□□□□ -1.79
TRS85YDR108W BNI1P41832 1953 aa3.84□□□□□ -1.79
TRS85YDR108W SAL1D6W196 494 aa3.84□□□□□ -1.79
TRS85YDR108W GDH1P07262 454 aaKnown RBP3.84□□□□□ -1.79
TRS85YDR108W RPS25BP0C0T4 108 aaKnown RBP3.84□□□□□ -1.79
TRS85YDR108W SCL1P21243 252 aaKnown RBP3.84□□□□□ -1.79
TRS85YDR108W MLF3P32047 452 aa3.84□□□□□ -1.79
TRS85YDR108W NTF2P33331 125 aaKnown RBP3.84□□□□□ -1.79
TRS85YDR108W YBR063CP38083 404 aa3.84□□□□□ -1.79
TRS85YDR108W POP8P38208 133 aa3.84□□□□□ -1.79
TRS85YDR108W RTC2P38279 296 aa3.84□□□□□ -1.79
TRS85YDR108W WSS1P38838 269 aa3.84□□□□□ -1.79
TRS85YDR108W SPO73P40031 143 aa3.84□□□□□ -1.79
TRS85YDR108W PUG1P40100 303 aa3.84□□□□□ -1.79
TRS85YDR108W SMK1P41808 388 aa3.84□□□□□ -1.79
TRS85YDR108W BUD9P53226 547 aa3.84□□□□□ -1.79
TRS85YDR108W GTR2P53290 341 aa3.84□□□□□ -1.79
TRS85YDR108W YGR250CP53316 781 aaKnown RBP3.84□□□□□ -1.79
TRS85YDR108W SAY1P53324 424 aa3.84□□□□□ -1.79
TRS85YDR108W RSM23Q01163 450 aa3.84□□□□□ -1.79
TRS85YDR108W OAZ1Q02803 292 aa3.84□□□□□ -1.79
TRS85YDR108W YPL077CQ02831 240 aa3.84□□□□□ -1.79
TRS85YDR108W PKR1Q03880 122 aaKnown RBP3.84□□□□□ -1.79
TRS85YDR108W YDR132CQ03900 495 aa3.84□□□□□ -1.79
TRS85YDR108W VBA4Q04602 768 aaKnown RBP3.84□□□□□ -1.79
TRS85YDR108W ECM18Q04623 453 aa3.84□□□□□ -1.79
TRS85YDR108W GTO3Q04806 366 aa3.84□□□□□ -1.79
TRS85YDR108W ADH6Q04894 360 aaKnown RBP3.84□□□□□ -1.79
TRS85YDR108W BSP1Q06604 576 aa3.84□□□□□ -1.79
TRS85YDR108W YTM1Q12024 460 aaPredicted RBP3.84□□□□□ -1.79
TRS85YDR108W PST1Q12355 444 aa3.84□□□□□ -1.79
TRS85YDR108W ISA2Q12425 185 aa3.84□□□□□ -1.79
TRS85YDR108W RPS25AQ3E792 108 aaPredicted RBP3.84□□□□□ -1.79
TRS85YDR108W TPI1P00942 248 aaKnown RBP3.83□□□□□ -1.8
TRS85YDR108W RIP1P08067 215 aa3.83□□□□□ -1.8
TRS85YDR108W YPR170W-BP0C5R9 85 aa3.83□□□□□ -1.8
TRS85YDR108W YML003WP0CF16 290 aa3.83□□□□□ -1.8
TRS85YDR108W SAM2P19358 384 aaKnown RBP3.83□□□□□ -1.8
TRS85YDR108W LSB5P25369 354 aa3.83□□□□□ -1.8
TRS85YDR108W RIM1P32445 135 aaKnown RBP3.83□□□□□ -1.8
TRS85YDR108W SFK1P35735 353 aa3.83□□□□□ -1.8
TRS85YDR108W LSM2P38203 95 aaKnown RBP3.83□□□□□ -1.8
TRS85YDR108W ACA1P39970 489 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms