RNA–Protein interactions for RNA: YDL191W

RPL35A, Transcript of Ribosomal 60S subunit protein L35A, yeast

Gene RPL35A, Length 363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL35A	YDL191W	PBP4	Q07362	185 aa	Known RBP	0.53	□□□□□ -2.32
RPL35A	YDL191W	ARN2	P38724	620 aa		0.52	□□□□□ -2.33
RPL35A	YDL191W	DPP1	Q05521	289 aa		0.52	□□□□□ -2.33
RPL35A	YDL191W	TAZ1	Q06510	381 aa		0.52	□□□□□ -2.33
RPL35A	YDL191W	DCN1	Q12395	269 aa		0.52	□□□□□ -2.33
RPL35A	YDL191W	MHT1	Q12525	324 aa		0.52	□□□□□ -2.33
RPL35A	YDL191W	FBA1	P14540	359 aa	Known RBP	0.51	□□□□□ -2.33
RPL35A	YDL191W	PPH21	P23594	369 aa		0.51	□□□□□ -2.33
RPL35A	YDL191W	YGL010W	P25338	174 aa		0.51	□□□□□ -2.33
RPL35A	YDL191W	SUA5	P32579	426 aa		0.51	□□□□□ -2.33
RPL35A	YDL191W	RPS0A	P32905	252 aa	Known RBP	0.51	□□□□□ -2.33
RPL35A	YDL191W	TEM1	P38987	245 aa		0.51	□□□□□ -2.33
RPL35A	YDL191W	YMR209C	Q03648	457 aa		0.51	□□□□□ -2.33
RPL35A	YDL191W	YOR114W	Q12219	294 aa		0.51	□□□□□ -2.33
RPL35A	YDL191W	SAS5	Q99314	248 aa		0.51	□□□□□ -2.33
RPL35A	YDL191W	YMR316C-A	I2HB70	103 aa		0.5	□□□□□ -2.33
RPL35A	YDL191W	RNP1	P32385	249 aa		0.5	□□□□□ -2.33
RPL35A	YDL191W	LAS1	P36146	502 aa	Predicted RBP	0.5	□□□□□ -2.33
RPL35A	YDL191W	LIN1	P38852	340 aa	Predicted RBP	0.5	□□□□□ -2.33
RPL35A	YDL191W	AAH1	P53909	347 aa		0.5	□□□□□ -2.33
RPL35A	YDL191W	APC9	Q12107	265 aa		0.5	□□□□□ -2.33
RPL35A	YDL191W	GEP5	Q12393	293 aa		0.5	□□□□□ -2.33
RPL35A	YDL191W	GAL3	P13045	520 aa		0.49	□□□□□ -2.33
RPL35A	YDL191W	MDH2	P22133	377 aa		0.49	□□□□□ -2.33
RPL35A	YDL191W	CAM1	P29547	415 aa	Known RBP	0.49	□□□□□ -2.33
RPL35A	YDL191W	YKL063C	P35725	167 aa		0.49	□□□□□ -2.33
RPL35A	YDL191W	HMT1	P38074	348 aa		0.49	□□□□□ -2.33
RPL35A	YDL191W	YBR220C	P38318	560 aa		0.49	□□□□□ -2.33
RPL35A	YDL191W	AGX1	P43567	385 aa		0.49	□□□□□ -2.33
RPL35A	YDL191W	NIF3	P53081	288 aa		0.49	□□□□□ -2.33
RPL35A	YDL191W	FMP41	P53889	259 aa	Known RBP	0.49	□□□□□ -2.33
RPL35A	YDL191W	ASI3	P53983	676 aa		0.49	□□□□□ -2.33
RPL35A	YDL191W	TAF9	Q05027	157 aa		0.49	□□□□□ -2.33
RPL35A	YDL191W	RAS2	P01120	322 aa	Known RBP	0.48	□□□□□ -2.33
RPL35A	YDL191W	POX1	P13711	748 aa		0.48	□□□□□ -2.33
RPL35A	YDL191W	SPT4	P32914	102 aa	Predicted RBP	0.48	□□□□□ -2.33
RPL35A	YDL191W	SWD2	P36104	329 aa	Predicted RBP	0.48	□□□□□ -2.33
RPL35A	YDL191W	VTC1	P40046	129 aa	RIP-Chip data	0.48	□□□□□ -2.33	not detected
RPL35A	YDL191W	GLE2	P40066	365 aa		0.48	□□□□□ -2.33
RPL35A	YDL191W	COX16	P47081	118 aa		0.48	□□□□□ -2.33
RPL35A	YDL191W	MDM34	P53083	459 aa		0.48	□□□□□ -2.33
RPL35A	YDL191W	YPL077C	Q02831	240 aa		0.48	□□□□□ -2.33
RPL35A	YDL191W	VPS60	Q03390	229 aa		0.48	□□□□□ -2.33
RPL35A	YDL191W	PST1	Q12355	444 aa		0.48	□□□□□ -2.33
RPL35A	YDL191W	PET494	P07390	489 aa	Predicted RBP	0.47	□□□□□ -2.33
RPL35A	YDL191W	FPR1	P20081	114 aa	Known RBP	0.47	□□□□□ -2.33
RPL35A	YDL191W	SCL1	P21243	252 aa	Known RBP	0.47	□□□□□ -2.33
RPL35A	YDL191W	RPC37	P36121	282 aa		0.47	□□□□□ -2.33
RPL35A	YDL191W	MAL32	P38158	584 aa		0.47	□□□□□ -2.33
RPL35A	YDL191W	SIF2	P38262	535 aa		0.47	□□□□□ -2.33
RPL35A	YDL191W	DOG1	P38774	246 aa		0.47	□□□□□ -2.33
RPL35A	YDL191W	BMT5	P40493	336 aa		0.47	□□□□□ -2.33
RPL35A	YDL191W	MAL12	P53341	584 aa		0.47	□□□□□ -2.33
RPL35A	YDL191W	PDR16	P53860	351 aa	Known RBP	0.47	□□□□□ -2.33
RPL35A	YDL191W	SDC1	Q03323	175 aa		0.47	□□□□□ -2.33
RPL35A	YDL191W	RPS3	P05750	240 aa	Known RBP	0.46	□□□□□ -2.34
RPL35A	YDL191W	COS2	P0CX12	379 aa		0.46	□□□□□ -2.34
RPL35A	YDL191W	COS3	P0CX13	379 aa		0.46	□□□□□ -2.34
RPL35A	YDL191W	MSS116	P15424	664 aa	Known RBP	0.46	□□□□□ -2.34
RPL35A	YDL191W	VMA2	P16140	517 aa	Known RBP	0.46	□□□□□ -2.34
RPL35A	YDL191W	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.46	□□□□□ -2.34	not detected
RPL35A	YDL191W	PEX4	P29340	183 aa		0.46	□□□□□ -2.34
RPL35A	YDL191W	FET3	P38993	636 aa		0.46	□□□□□ -2.34
RPL35A	YDL191W	OST2	P46964	130 aa		0.46	□□□□□ -2.34
RPL35A	YDL191W	YJL028W	P47062	111 aa		0.46	□□□□□ -2.34
RPL35A	YDL191W	BOP2	Q06150	570 aa		0.46	□□□□□ -2.34
RPL35A	YDL191W	ASR1	Q06834	288 aa		0.46	□□□□□ -2.34
RPL35A	YDL191W	PML1	Q07930	204 aa	Predicted RBP	0.46	□□□□□ -2.34
RPL35A	YDL191W	YBR219C	P38317	127 aa		0.45	□□□□□ -2.34
RPL35A	YDL191W	SWC5	P38326	303 aa		0.45	□□□□□ -2.34
RPL35A	YDL191W	NPT1	P39683	429 aa	Known RBP	0.45	□□□□□ -2.34
RPL35A	YDL191W	YIA6	P40556	373 aa		0.45	□□□□□ -2.34
RPL35A	YDL191W	PRM10	P42946	383 aa		0.45	□□□□□ -2.34
RPL35A	YDL191W	GTO1	P48239	356 aa		0.45	□□□□□ -2.34
RPL35A	YDL191W	ERG25	P53045	309 aa		0.45	□□□□□ -2.34
RPL35A	YDL191W	TRM44	Q02648	567 aa	Known RBP	0.45	□□□□□ -2.34
RPL35A	YDL191W	SIA1	Q12212	622 aa		0.45	□□□□□ -2.34
RPL35A	YDL191W	PAA1	Q12447	191 aa	Known RBP	0.45	□□□□□ -2.34
RPL35A	YDL191W	YAL064W-B	O13512	126 aa		0.44	□□□□□ -2.34
RPL35A	YDL191W	ATP6	P00854	259 aa		0.44	□□□□□ -2.34
RPL35A	YDL191W	DSF1	P0CX08	502 aa		0.44	□□□□□ -2.34
RPL35A	YDL191W	YNR073C	P0CX09	502 aa		0.44	□□□□□ -2.34
RPL35A	YDL191W	RPL5	P26321	297 aa	Known RBP	0.44	□□□□□ -2.34
RPL35A	YDL191W	IBA57	P47158	497 aa		0.44	□□□□□ -2.34
RPL35A	YDL191W	BUD25	P85052	153 aa		0.44	□□□□□ -2.34
RPL35A	YDL191W	MRPS8	Q03799	155 aa		0.44	□□□□□ -2.34
RPL35A	YDL191W	LOA1	Q06508	300 aa		0.44	□□□□□ -2.34
RPL35A	YDL191W	SLD7	Q08457	257 aa		0.44	□□□□□ -2.34
RPL35A	YDL191W	NFI1	Q12216	726 aa		0.44	□□□□□ -2.34
RPL35A	YDL191W	ERP4	Q12450	207 aa		0.44	□□□□□ -2.34
RPL35A	YDL191W	RPL2A	P0CX45	254 aa	Known RBP	0.43	□□□□□ -2.34
RPL35A	YDL191W	RPL2B	P0CX46	254 aa	Known RBP	0.43	□□□□□ -2.34
RPL35A	YDL191W	ECM13	P38195	257 aa		0.43	□□□□□ -2.34
RPL35A	YDL191W	TDA11	P38854	504 aa		0.43	□□□□□ -2.34
RPL35A	YDL191W	AVT2	P39981	480 aa		0.43	□□□□□ -2.34
RPL35A	YDL191W	CYT2	Q00873	224 aa		0.43	□□□□□ -2.34
RPL35A	YDL191W	RSM10	Q03201	203 aa		0.43	□□□□□ -2.34
RPL35A	YDL191W	RCF1	Q03713	159 aa		0.43	□□□□□ -2.34
RPL35A	YDL191W	PEX10	Q05568	337 aa		0.43	□□□□□ -2.34
RPL35A	YDL191W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.43	□□□□□ -2.34	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 75.4 ms