RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W ZTA1P38230 334 aaKnown RBP1.44□□□□□ -2.18
TRM3YDL112W QRI1P43123 477 aaKnown RBP1.44□□□□□ -2.18
TRM3YDL112W NCA3P46955 337 aa1.44□□□□□ -2.18
TRM3YDL112W YGR126WP53274 230 aa1.44□□□□□ -2.18
TRM3YDL112W DCP2P53550 970 aaKnown RBP1.44□□□□□ -2.18
TRM3YDL112W KAP120Q02932 1032 aa1.44□□□□□ -2.18
TRM3YDL112W RRB1Q04225 511 aaKnown RBP1.44□□□□□ -2.18
TRM3YDL112W MUM3Q08750 479 aa1.44□□□□□ -2.18
TRM3YDL112W RDL1Q12305 139 aaKnown RBP1.44□□□□□ -2.18
TRM3YDL112W RPN6Q12377 434 aa1.44□□□□□ -2.18
TRM3YDL112W RPS8AP0CX39 200 aaKnown RBP1.44□□□□□ -2.18
TRM3YDL112W RPS8BP0CX40 200 aaKnown RBP1.44□□□□□ -2.18
TRM3YDL112W MRP20P32387 263 aa1.44□□□□□ -2.18
TRM3YDL112W TIM12P32830 109 aa1.44□□□□□ -2.18
TRM3YDL112W PTC1P35182 281 aa1.44□□□□□ -2.18
TRM3YDL112W RGI1P40043 161 aaPredicted RBP1.44□□□□□ -2.18
TRM3YDL112W ARF3P40994 183 aaRIP-Chip data1.44□□□□□ -2.18not detected
TRM3YDL112W HSP31Q04432 237 aa1.44□□□□□ -2.18
TRM3YDL112W YHC1Q05900 231 aaKnown RBP1.44□□□□□ -2.18
TRM3YDL112W MRPL51Q06090 140 aaPredicted RBP1.44□□□□□ -2.18
TRM3YDL112W MRX4Q12467 430 aa1.44□□□□□ -2.18
TRM3YDL112W YAL064W-BO13512 126 aa1.44□□□□□ -2.18
TRM3YDL112W MET17P06106 444 aa1.44□□□□□ -2.18
TRM3YDL112W TCA17P32613 152 aa1.44□□□□□ -2.18
TRM3YDL112W SPT10P35208 640 aa1.44□□□□□ -2.18
TRM3YDL112W JEN1P36035 616 aa1.44□□□□□ -2.18
TRM3YDL112W TSC10P38342 320 aa1.44□□□□□ -2.18
TRM3YDL112W BIG1P38813 335 aa1.44□□□□□ -2.18
TRM3YDL112W YHR180WP38868 163 aa1.44□□□□□ -2.18
TRM3YDL112W YER084WP40057 128 aa1.44□□□□□ -2.18
TRM3YDL112W LSM4P40070 187 aaKnown RBP1.44□□□□□ -2.18
TRM3YDL112W SHO1P40073 367 aa1.44□□□□□ -2.18
TRM3YDL112W UPF3P48412 387 aaKnown RBP1.44□□□□□ -2.18
TRM3YDL112W MIG2P53035 382 aa1.44□□□□□ -2.18
TRM3YDL112W MTM1P53320 366 aa1.44□□□□□ -2.18
TRM3YDL112W SMM1P53720 384 aaKnown RBP1.44□□□□□ -2.18
TRM3YDL112W YNR068CP53754 272 aa1.44□□□□□ -2.18
TRM3YDL112W HHT1P61830 136 aa1.44□□□□□ -2.18
TRM3YDL112W COX20Q04935 205 aa1.44□□□□□ -2.18
TRM3YDL112W YML003WP0CF16 290 aa1.43□□□□□ -2.18
TRM3YDL112W HNM1P19807 563 aa1.43□□□□□ -2.18
TRM3YDL112W STE50P25344 346 aa1.43□□□□□ -2.18
TRM3YDL112W APD1P38281 316 aa1.43□□□□□ -2.18
TRM3YDL112W NAB3P38996 802 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
TRM3YDL112W PAC2P39937 518 aa1.43□□□□□ -2.18
TRM3YDL112W IES5P40060 125 aa1.43□□□□□ -2.18
TRM3YDL112W UBP8P50102 471 aa1.43□□□□□ -2.18
TRM3YDL112W GLO1P50107 326 aa1.43□□□□□ -2.18
TRM3YDL112W YGL101WP53144 215 aa1.43□□□□□ -2.18
TRM3YDL112W ADH6Q04894 360 aaKnown RBP1.43□□□□□ -2.18
TRM3YDL112W GAT3Q07928 141 aa1.43□□□□□ -2.18
TRM3YDL112W THP1Q08231 455 aa1.43□□□□□ -2.18
TRM3YDL112W SCEIP03882 235 aa1.43□□□□□ -2.18
TRM3YDL112W HSP30P25619 332 aa1.43□□□□□ -2.18
TRM3YDL112W GPI18P38211 433 aa1.43□□□□□ -2.18
TRM3YDL112W YFR054CP43622 192 aa1.43□□□□□ -2.18
TRM3YDL112W SED1Q01589 338 aa1.43□□□□□ -2.18
TRM3YDL112W CTL1Q03220 320 aaKnown RBP1.43□□□□□ -2.18
TRM3YDL112W RSN1Q03516 953 aa1.43□□□□□ -2.18
TRM3YDL112W ARV1Q06541 321 aa1.43□□□□□ -2.18
TRM3YDL112W SGT1Q08446 395 aa1.43□□□□□ -2.18
TRM3YDL112W SNF8Q12483 233 aa1.43□□□□□ -2.18
TRM3YDL112W HXT2P23585 541 aa1.43□□□□□ -2.18
TRM3YDL112W LHP1P33399 275 aaKnown RBP1.43□□□□□ -2.18
TRM3YDL112W CLG1P35190 452 aa1.43□□□□□ -2.18
TRM3YDL112W FIG1P38224 298 aa1.43□□□□□ -2.18
TRM3YDL112W FET3P38993 636 aa1.43□□□□□ -2.18
TRM3YDL112W SLZ1P40167 298 aa1.43□□□□□ -2.18
TRM3YDL112W BAT2P47176 376 aaKnown RBP1.43□□□□□ -2.18
TRM3YDL112W SKO1Q02100 647 aa1.43□□□□□ -2.18
TRM3YDL112W RRN5Q02983 363 aa1.43□□□□□ -2.18
TRM3YDL112W KRE28Q04431 385 aa1.43□□□□□ -2.18
TRM3YDL112W YMR317WQ04893 1140 aa1.43□□□□□ -2.18
TRM3YDL112W RNH202Q05635 350 aa1.43□□□□□ -2.18
TRM3YDL112W TMC1Q08422 150 aaPredicted RBP1.43□□□□□ -2.18
TRM3YDL112W RRS1Q08746 203 aaKnown RBP1.43□□□□□ -2.18
TRM3YDL112W RTC5Q12108 567 aaKnown RBP1.43□□□□□ -2.18
TRM3YDL112W YHR214C-EQ8TGK0 99 aa1.43□□□□□ -2.18
TRM3YDL112W CTA1P15202 515 aa1.42□□□□□ -2.18
TRM3YDL112W ERD2P18414 219 aa1.42□□□□□ -2.18
TRM3YDL112W RRP7P25368 297 aaPredicted RBP1.42□□□□□ -2.18
TRM3YDL112W CLB6P32943 380 aa1.42□□□□□ -2.18
TRM3YDL112W YHR218WP38899 603 aa1.42□□□□□ -2.18
TRM3YDL112W JEM1P40358 645 aa1.42□□□□□ -2.18
TRM3YDL112W GLR1P41921 483 aaKnown RBP1.42□□□□□ -2.18
TRM3YDL112W SWP82P43554 623 aa1.42□□□□□ -2.18
TRM3YDL112W ADO1P47143 340 aaKnown RBP1.42□□□□□ -2.18
TRM3YDL112W YPL191CQ08930 360 aa1.42□□□□□ -2.18
TRM3YDL112W YRM1Q12340 786 aa1.42□□□□□ -2.18
TRM3YDL112W WTM1Q12363 437 aaKnown RBP1.42□□□□□ -2.18
TRM3YDL112W BPH1P25356 2167 aa1.42□□□□□ -2.18
TRM3YDL112W RAD7P06779 565 aa1.42□□□□□ -2.18
TRM3YDL112W YPK2P18961 677 aa1.42□□□□□ -2.18
TRM3YDL112W PAD1P33751 242 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
TRM3YDL112W NUF2P33895 451 aa1.42□□□□□ -2.18
TRM3YDL112W CUE1P38428 203 aa1.42□□□□□ -2.18
TRM3YDL112W MPM1P40364 252 aa1.42□□□□□ -2.18
TRM3YDL112W CRZ1P53968 678 aa1.42□□□□□ -2.18
TRM3YDL112W INP1Q03694 420 aa1.42□□□□□ -2.18
TRM3YDL112W YTH1Q06102 208 aaPredicted RBP1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms